Orgun, Mehmet A.
UniMOS: A Universal Framework For Multi-Organ Segmentation Over Label-Constrained Datasets
Li, Can, Shao, Sheng, Qu, Junyi, Pang, Shuchao, Orgun, Mehmet A.
Machine learning models for medical images can help physicians diagnose and manage diseases. However, due to the fact that medical image annotation requires a great deal of manpower and expertise, as well as the fact that clinical departments perform image annotation based on task orientation, there is the problem of having fewer medical image annotation data with more unlabeled data and having many datasets that annotate only a single organ. In this paper, we present UniMOS, the first universal framework for achieving the utilization of fully and partially labeled images as well as unlabeled images. Specifically, we construct a Multi-Organ Segmentation (MOS) module over fully/partially labeled data as the basenet and designed a new target adaptive loss. Furthermore, we incorporate a semi-supervised training module that combines consistent regularization and pseudolabeling techniques on unlabeled data, which significantly improves the segmentation of unlabeled data. Experiments show that the framework exhibits excellent performance in several medical image segmentation tasks compared to other advanced methods, and also significantly improves data utilization and reduces annotation cost. Code and models are available at: https://github.com/lw8807001/UniMOS.
Beyond CNNs: Exploiting Further Inherent Symmetries in Medical Image Segmentation
Pang, Shuchao, Du, Anan, Orgun, Mehmet A., Wang, Yan, Sheng, Quan Z., Wang, Shoujin, Huang, Xiaoshui, Yu, Zhenmei
Automatic tumor or lesion segmentation is a crucial step in medical image analysis for computer-aided diagnosis. Although the existing methods based on Convolutional Neural Networks (CNNs) have achieved the state-of-the-art performance, many challenges still remain in medical tumor segmentation. This is because, although the human visual system can detect symmetries in 2D images effectively, regular CNNs can only exploit translation invariance, overlooking further inherent symmetries existing in medical images such as rotations and reflections. To solve this problem, we propose a novel group equivariant segmentation framework by encoding those inherent symmetries for learning more precise representations. First, kernel-based equivariant operations are devised on each orientation, which allows it to effectively address the gaps of learning symmetries in existing approaches. Then, to keep segmentation networks globally equivariant, we design distinctive group layers with layer-wise symmetry constraints. Finally, based on our novel framework, extensive experiments conducted on real-world clinical data demonstrate that a Group Equivariant Res-UNet (named GER-UNet) outperforms its regular CNN-based counterpart and the state-of-the-art segmentation methods in the tasks of hepatic tumor segmentation, COVID-19 lung infection segmentation and retinal vessel detection. More importantly, the newly built GER-UNet also shows potential in reducing the sample complexity and the redundancy of filters, upgrading current segmentation CNNs and delineating organs on other medical imaging modalities.
Graph Learning based Recommender Systems: A Review
Wang, Shoujin, Hu, Liang, Wang, Yan, He, Xiangnan, Sheng, Quan Z., Orgun, Mehmet A., Cao, Longbing, Ricci, Francesco, Yu, Philip S.
Recent years have witnessed the fast development of the emerging topic of Graph Learning based Recommender Systems (GLRS). GLRS employ advanced graph learning approaches to model users' preferences and intentions as well as items' characteristics for recommendations. Differently from other RS approaches, including content-based filtering and collaborative filtering, GLRS are built on graphs where the important objects, e.g., users, items, and attributes, are either explicitly or implicitly connected. With the rapid development of graph learning techniques, exploring and exploiting homogeneous or heterogeneous relations in graphs are a promising direction for building more effective RS. In this paper, we provide a systematic review of GLRS, by discussing how they extract important knowledge from graph-based representations to improve the accuracy, reliability and explainability of the recommendations. First, we characterize and formalize GLRS, and then summarize and categorize the key challenges and main progress in this novel research area. Finally, we share some new research directions in this vibrant area.
Trust Prediction with Propagation and Similarity Regularization
Zheng, Xiaoming (Macquarie University) | Wang, Yan (Macquarie University) | Orgun, Mehmet A. (Macquarie University) | Zhong, Youliang (Macquarie University) | Liu, Guanfeng (Soochow University)
Online social networks have been used for a variety of rich activities in recent years, such as investigating potential employees and seeking recommendations of high quality services and service providers. In such activities, trust is one of the most critical factors for the decision-making of users. In the literature, the state-of-the-art trust prediction approaches focus on either dispositional trust tendency and propagated trust of the pair-wise trust relationships along a path or the similarity of trust rating values. However, there are other influential factors that should be taken into account, such as the similarity of the trust rating distributions. In addition, tendency, propagated trust and similarity are of different types, as either personal properties or interpersonal properties. But the difference has been neglected in existing models. Therefore, in trust prediction, it is necessary to take all the above factors into consideration in modeling, and process them separately and differently. In this paper we propose a new trust prediction model based on trust decomposition and matrix factorization, considering all the above influential factors and differentiating both personal and interpersonal properties. In this model, we first decompose trust into trust tendency and tendency-reduced trust. Then, based on tendency-reduced trust ratings, matrix factorization with a regularization term is leveraged to predict the tendency-reduced values of missing trust ratings, incorporating both propagated trust and the similarity of users' rating habits. In the end, the missing trust ratings are composed with predicted tendency-reduced values and trust tendency values. Experiments conducted on a real-world dataset illustrate significant improvement delivered by our approach in trust prediction accuracy over the state-of-the-art approaches.