Applied ethics is ubiquitous in most domains, requiring much deliberation due to its philosophical nature. Varying views often lead to conflicting courses of action where ethical dilemmas become challenging to resolve. Although many factors contribute to such a decision, the major driving forces can be discretized and thus simplified to provide an indicative answer. Knowledge representation and reasoning offer a way to explicitly translate abstract ethical concepts into applicable principles within the context of an event. To achieve this, we propose ApplE, an Applied Ethics ontology that captures philosophical theory and event context to holistically describe the morality of an action. The development process adheres to a modified version of the Simplified Agile Methodology for Ontology Development (SAMOD) and utilizes standard design and publication practices. Using ApplE, we model a use case from the bioethics domain that demonstrates our ontology's social and scientific value. Apart from the ontological reasoning and quality checks, ApplE is also evaluated using the three-fold testing process of SAMOD. ApplE follows FAIR principles and aims to be a viable resource for applied ethicists and ontology engineers.

Relation extraction (RE) is a well-known NLP application often treated as a sentence- or document-level task. However, a handful of recent efforts explore it across documents or in the cross-document setting (CrossDocRE). This is distinct from the single document case because different documents often focus on disparate themes, while text within a document tends to have a single goal. Linking findings from disparate documents to identify new relationships is at the core of the popular literature-based knowledge discovery paradigm in biomedicine and other domains. Current CrossDocRE efforts do not consider domain knowledge, which are often assumed to be known to the reader when documents are authored. Here, we propose a novel approach, KXDocRE, that embed domain knowledge of entities with input text for cross-document RE. Our proposed framework has three main benefits over baselines: 1) it incorporates domain knowledge of entities along with documents' text; 2) it offers interpretability by producing explanatory text for predicted relations between entities 3) it improves performance over the prior methods.

Relation Extraction (RE) is the task of extracting semantic relationships between entities in a sentence and aligning them to relations defined in a vocabulary, which is generally in the form of a Knowledge Graph (KG) or an ontology. Various approaches have been proposed so far to address this task. However, applying these techniques to biomedical text often yields unsatisfactory results because it is hard to infer relations directly from sentences due to the nature of the biomedical relations. To address these issues, we present a novel technique called ReOnto, that makes use of neuro symbolic knowledge for the RE task. ReOnto employs a graph neural network to acquire the sentence representation and leverages publicly accessible ontologies as prior knowledge to identify the sentential relation between two entities. The approach involves extracting the relation path between the two entities from the ontology. We evaluate the effect of using symbolic knowledge from ontologies with graph neural networks. Experimental results on two public biomedical datasets, BioRel and ADE, show that our method outperforms all the baselines (approximately by 3\%).

Ontologies are used in various domains, with RDF and OWL being prominent standards for ontology development. RDF is favored for its simplicity and flexibility, while OWL enables detailed domain knowledge representation. However, as ontologies grow larger and more expressive, reasoning complexity increases, and traditional reasoners struggle to perform efficiently. Despite optimization efforts, scalability remains an issue. Additionally, advancements in automated knowledge base construction have created large and expressive ontologies that are often noisy and inconsistent, posing further challenges for conventional reasoners. To address these challenges, researchers have explored neuro-symbolic approaches that combine neural networks' learning capabilities with symbolic systems' reasoning abilities. In this chapter,we provide an overview of the existing literature in the field of neuro-symbolic deductive reasoning supported by RDF(S), the description logics EL and ALC, and OWL 2 RL, discussing the techniques employed, the tasks they address, and other relevant efforts in this area.

Ontologies are known for their ability to organize rich metadata, support the identification of novel insights via semantic queries, and promote reuse. In this paper, we consider the problem of automated planning, where the objective is to find a sequence of actions that will move an agent from an initial state of the world to a desired goal state. We hypothesize that given a large number of available planners and diverse planning domains; they carry essential information that can be leveraged to identify suitable planners and improve their performance for a domain. We use data on planning domains and planners from the International Planning Competition (IPC) to construct a planning ontology and demonstrate via experiments in two use cases that the ontology can lead to the selection of promising planners and improving their performance using macros - a form of action ordering constraints extracted from planning ontology. We also make the planning ontology and associated resources available to the community to promote further research.

Building an ontology is not only a time-consuming process, but it is also confusing, especially for beginners and the inexperienced. Although ontology developers can take the help of domain experts in building an ontology, they are not readily available in several cases for a variety of reasons. Ontology developers have to grapple with several questions related to the choice of classes, properties, and the axioms that should be included. Apart from this, there are aspects such as modularity and reusability that should be taken care of. From among the thousands of publicly available ontologies and vocabularies in repositories such as Linked Open Vocabularies (LOV) and BioPortal, it is hard to know the terms (classes and properties) that can be reused in the development of an ontology. A similar problem exists in implementing the right set of ontology design patterns (ODPs) from among the several available. Generally, ontology developers make use of their experience in handling these issues, and the inexperienced ones have a hard time. In order to bridge this gap, we propose a tool named OntoSeer, that monitors the ontology development process and provides suggestions in real-time to improve the quality of the ontology under development. It can provide suggestions on the naming conventions to follow, vocabulary to reuse, ODPs to implement, and axioms to be added to the ontology. OntoSeer has been implemented as a Prot\'eg\'e plug-in.