Morrison, Paul
TorchXRayVision: A library of chest X-ray datasets and models
Cohen, Joseph Paul, Viviano, Joseph D., Bertin, Paul, Morrison, Paul, Torabian, Parsa, Guarrera, Matteo, Lungren, Matthew P, Chaudhari, Akshay, Brooks, Rupert, Hashir, Mohammad, Bertrand, Hadrien
TorchXRayVision is an open source software library for working with chest X-ray datasets and deep learning models. It provides a common interface and common pre-processing chain for a wide set of publicly available chest X-ray datasets. In addition, a number of classification and representation learning models with different architectures, trained on different data combinations, are available through the library to serve as baselines or feature extractors.
COVID-19 Image Data Collection: Prospective Predictions Are the Future
Cohen, Joseph Paul, Morrison, Paul, Dao, Lan, Roth, Karsten, Duong, Tim Q, Ghassemi, Marzyeh
Across the world's coronavirus disease 2019 (COVID-19) hot spots, the need to streamline patient diagnosis and management has become more pressing than ever. As one of the main imaging tools, chest X-rays (CXRs) are common, fast, non-invasive, relatively cheap, and potentially bedside to monitor the progression of the disease. This paper describes the first public COVID-19 image data collection as well as a preliminary exploration of possible use cases for the data. This dataset currently contains hundreds of frontal view X-rays and is the largest public resource for COVID-19 image and prognostic data, making it a necessary resource to develop and evaluate tools to aid in the treatment of COVID-19. It was manually aggregated from publication figures as well as various web based repositories into a machine learning (ML) friendly format with accompanying dataloader code. We collected frontal and lateral view imagery and metadata such as the time since first symptoms, intensive care unit (ICU) status, survival status, intubation status, or hospital location.