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Collaborating Authors

 Lv, Xiao


ODFormer: Semantic Fundus Image Segmentation Using Transformer for Optic Nerve Head Detection

arXiv.org Artificial Intelligence

Optic nerve head (ONH) detection has been a crucial area of study in ophthalmology for years. However, the significant discrepancy between fundus image datasets, each generated using a single type of fundus camera, poses challenges to the generalizability of ONH detection approaches developed based on semantic segmentation networks. Despite the numerous recent advancements in general-purpose semantic segmentation methods using convolutional neural networks (CNNs) and Transformers, there is currently a lack of benchmarks for these state-of-the-art (SoTA) networks specifically trained for ONH detection. Therefore, in this article, we make contributions from three key aspects: network design, the publication of a dataset, and the establishment of a comprehensive benchmark. Our newly developed ONH detection network, referred to as ODFormer, is based upon the Swin Transformer architecture and incorporates two novel components: a multi-scale context aggregator and a lightweight bidirectional feature recalibrator. Our published large-scale dataset, known as TongjiU-DROD, provides multi-resolution fundus images for each participant, captured using two distinct types of cameras. Our established benchmark involves three datasets: DRIONS-DB, DRISHTI-GS1, and TongjiU-DROD, created by researchers from different countries and containing fundus images captured from participants of diverse races and ages. Extensive experimental results demonstrate that our proposed ODFormer outperforms other state-of-the-art (SoTA) networks in terms of performance and generalizability. Our dataset and source code are publicly available at mias.group/ODFormer.


AnaMeta: A Table Understanding Dataset of Field Metadata Knowledge Shared by Multi-dimensional Data Analysis Tasks

arXiv.org Artificial Intelligence

Tabular data analysis is performed every day across various domains. It requires an accurate understanding of field semantics to correctly operate on table fields and find common patterns in daily analysis. In this paper, we introduce the AnaMeta dataset, a collection of 467k tables with derived supervision labels for four types of commonly used field metadata: measure/dimension dichotomy, common field roles, semantic field type, and default aggregation function. We evaluate a wide range of models for inferring metadata as the benchmark. We also propose a multi-encoder framework, called KDF, which improves the metadata understanding capability of tabular models by incorporating distribution and knowledge information. Furthermore, we propose four interfaces for incorporating field metadata into downstream analysis tasks.