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 He, Yong


Integrating remote sensing data assimilation, deep learning and large language model for interactive wheat breeding yield prediction

arXiv.org Artificial Intelligence

Yield is one of the core goals of crop breeding. By predicting the potential yield of different breeding materials, breeders can screen these materials at various growth stages to select the best performing. Based on unmanned aerial vehicle remote sensing technology, high-throughput crop phenotyping data in breeding areas is collected to provide data support for the breeding decisions of breeders. However, the accuracy of current yield predictions still requires improvement, and the usability and user-friendliness of yield forecasting tools remain suboptimal. To address these challenges, this study introduces a hybrid method and tool for crop yield prediction, designed to allow breeders to interactively and accurately predict wheat yield by chatting with a large language model (LLM). First, the newly designed data assimilation algorithm is used to assimilate the leaf area index into the WOFOST model. Then, selected outputs from the assimilation process, along with remote sensing inversion results, are used to drive the time-series temporal fusion transformer model for wheat yield prediction. Finally, based on this hybrid method and leveraging an LLM with retrieval augmented generation technology, we developed an interactive yield prediction Web tool that is user-friendly and supports sustainable data updates. This tool integrates multi-source data to assist breeding decision-making. This study aims to accelerate the identification of high-yield materials in the breeding process, enhance breeding efficiency, and enable more scientific and smart breeding decisions.


Fully Open Source Moxin-7B Technical Report

arXiv.org Artificial Intelligence

Recently, Large Language Models (LLMs) have undergone a significant transformation, marked by a rapid rise in both their popularity and capabilities. Leading this evolution are proprietary LLMs like GPT-4 and GPT-o1, which have captured widespread attention in the AI community due to their remarkable performance and versatility. Simultaneously, open-source LLMs, such as LLaMA and Mistral, have made great contributions to the ever-increasing popularity of LLMs due to the ease to customize and deploy the models across diverse applications. Although open-source LLMs present unprecedented opportunities for innovation and research, the commercialization of LLMs has raised concerns about transparency, reproducibility, and safety. Many open-source LLMs fail to meet fundamental transparency requirements by withholding essential components like training code and data, and some use restrictive licenses whilst claiming to be "open-source," which may hinder further innovations on LLMs. To mitigate this issue, we introduce Moxin 7B, a fully open-source LLM developed in accordance with the Model Openness Framework (MOF), a ranked classification system that evaluates AI models based on model completeness and openness, adhering to principles of open science, open source, open data, and open access. Our model achieves the highest MOF classification level of "open science" through the comprehensive release of pre-training code and configurations, training and fine-tuning datasets, and intermediate and final checkpoints. Experiments show that our model achieves superior performance in zero-shot evaluation compared with popular 7B models and performs competitively in few-shot evaluation.


Representational Transfer Learning for Matrix Completion

arXiv.org Machine Learning

We propose to transfer representational knowledge from multiple sources to a target noisy matrix completion task by aggregating singular subspaces information. Under our representational similarity framework, we first integrate linear representation information by solving a two-way principal component analysis problem based on a properly debiased matrix-valued dataset. After acquiring better column and row representation estimators from the sources, the original high-dimensional target matrix completion problem is then transformed into a low-dimensional linear regression, of which the statistical efficiency is guaranteed. A variety of extensional arguments, including post-transfer statistical inference and robustness against negative transfer, are also discussed alongside. Finally, extensive simulation results and a number of real data cases are reported to support our claims.


Multimodal large language model for wheat breeding: a new exploration of smart breeding

arXiv.org Artificial Intelligence

UAV remote sensing technology has become a key technology in crop breeding, which can achieve high-throughput and non-destructive collection of crop phenotyping data. However, the multidisciplinary nature of breeding has brought technical barriers and efficiency challenges to knowledge mining. Therefore, it is important to develop a smart breeding goal tool to mine cross-domain multimodal data. Based on different pre-trained open-source multimodal large language models (MLLMs) (e.g., Qwen-VL, InternVL, Deepseek-VL), this study used supervised fine-tuning (SFT), retrieval-augmented generation (RAG), and reinforcement learning from human feedback (RLHF) technologies to inject cross-domain knowledge into MLLMs, thereby constructing multiple multimodal large language models for wheat breeding (WBLMs). The above WBLMs were evaluated using the newly created evaluation benchmark in this study. The results showed that the WBLM constructed using SFT, RAG and RLHF technologies and InternVL2-8B has leading performance. Then, subsequent experiments were conducted using the WBLM. Ablation experiments indicated that the combination of SFT, RAG, and RLHF technologies can improve the overall generation performance, enhance the generated quality, balance the timeliness and adaptability of the generated answer, and reduce hallucinations and biases. The WBLM performed best in wheat yield prediction using cross-domain data (remote sensing, phenotyping, weather, germplasm) simultaneously, with R2 and RMSE of 0.821 and 489.254 kg/ha, respectively. Furthermore, the WBLM can generate professional decision support answers for phenotyping estimation, environmental stress assessment, target germplasm screening, cultivation technique recommendation, and seed price query tasks.


Breaking the Length Barrier: LLM-Enhanced CTR Prediction in Long Textual User Behaviors

arXiv.org Artificial Intelligence

With the rise of large language models (LLMs), recent works have leveraged LLMs to improve the performance of click-through rate (CTR) prediction. However, we argue that a critical obstacle remains in deploying LLMs for practical use: the efficiency of LLMs when processing long textual user behaviors. As user sequences grow longer, the current efficiency of LLMs is inadequate for training on billions of users and items. To break through the efficiency barrier of LLMs, we propose Behavior Aggregated Hierarchical Encoding (BAHE) to enhance the efficiency of LLM-based CTR modeling. Specifically, BAHE proposes a novel hierarchical architecture that decouples the encoding of user behaviors from inter-behavior interactions. Firstly, to prevent computational redundancy from repeated encoding of identical user behaviors, BAHE employs the LLM's pre-trained shallow layers to extract embeddings of the most granular, atomic user behaviors from extensive user sequences and stores them in the offline database. Subsequently, the deeper, trainable layers of the LLM facilitate intricate inter-behavior interactions, thereby generating comprehensive user embeddings. This separation allows the learning of high-level user representations to be independent of low-level behavior encoding, significantly reducing computational complexity. Finally, these refined user embeddings, in conjunction with correspondingly processed item embeddings, are incorporated into the CTR model to compute the CTR scores. Extensive experimental results show that BAHE reduces training time and memory by five times for CTR models using LLMs, especially with longer user sequences. BAHE has been deployed in a real-world system, allowing for daily updates of 50 million CTR data on 8 A100 GPUs, making LLMs practical for industrial CTR prediction.


Knowledge Transfer across Multiple Principal Component Analysis Studies

arXiv.org Machine Learning

Transfer learning has aroused great interest in the statistical community. In this article, we focus on knowledge transfer for unsupervised learning tasks in contrast to the supervised learning tasks in the literature. Given the transferable source populations, we propose a two-step transfer learning algorithm to extract useful information from multiple source principal component analysis (PCA) studies, thereby enhancing estimation accuracy for the target PCA task. In the first step, we integrate the shared subspace information across multiple studies by a proposed method named as Grassmannian barycenter, instead of directly performing PCA on the pooled dataset. The proposed Grassmannian barycenter method enjoys robustness and computational advantages in more general cases. Then the resulting estimator for the shared subspace from the first step is further utilized to estimate the target private subspace in the second step. Our theoretical analysis credits the gain of knowledge transfer between PCA studies to the enlarged eigenvalue gap, which is different from the existing supervised transfer learning tasks where sparsity plays the central role. In addition, we prove that the bilinear forms of the empirical spectral projectors have asymptotic normality under weaker eigenvalue gap conditions after knowledge transfer. When the set of informativesources is unknown, we endow our algorithm with the capability of useful dataset selection by solving a rectified optimization problem on the Grassmann manifold, which in turn leads to a computationally friendly rectified Grassmannian K-means procedure. In the end, extensive numerical simulation results and a real data case concerning activity recognition are reported to support our theoretical claims and to illustrate the empirical usefulness of the proposed transfer learning methods.


AntM$^{2}$C: A Large Scale Dataset For Multi-Scenario Multi-Modal CTR Prediction

arXiv.org Artificial Intelligence

Click-through rate (CTR) prediction is a crucial issue in recommendation systems. There has been an emergence of various public CTR datasets. However, existing datasets primarily suffer from the following limitations. Firstly, users generally click different types of items from multiple scenarios, and modeling from multiple scenarios can provide a more comprehensive understanding of users. Existing datasets only include data for the same type of items from a single scenario. Secondly, multi-modal features are essential in multi-scenario prediction as they address the issue of inconsistent ID encoding between different scenarios. The existing datasets are based on ID features and lack multi-modal features. Third, a large-scale dataset can provide a more reliable evaluation of models, fully reflecting the performance differences between models. The scale of existing datasets is around 100 million, which is relatively small compared to the real-world CTR prediction. To address these limitations, we propose AntM$^{2}$C, a Multi-Scenario Multi-Modal CTR dataset based on industrial data from Alipay. Specifically, AntM$^{2}$C provides the following advantages: 1) It covers CTR data of 5 different types of items, providing insights into the preferences of users for different items, including advertisements, vouchers, mini-programs, contents, and videos. 2) Apart from ID-based features, AntM$^{2}$C also provides 2 multi-modal features, raw text and image features, which can effectively establish connections between items with different IDs. 3) AntM$^{2}$C provides 1 billion CTR data with 200 features, including 200 million users and 6 million items. It is currently the largest-scale CTR dataset available. Based on AntM$^{2}$C, we construct several typical CTR tasks and provide comparisons with baseline methods. The dataset homepage is available at https://www.atecup.cn/home.


GDOD: Effective Gradient Descent using Orthogonal Decomposition for Multi-Task Learning

arXiv.org Artificial Intelligence

Multi-task learning (MTL) aims at solving multiple related tasks simultaneously and has experienced rapid growth in recent years. However, MTL models often suffer from performance degeneration with negative transfer due to learning several tasks simultaneously. Some related work attributed the source of the problem is the conflicting gradients. In this case, it is needed to select useful gradient updates for all tasks carefully. To this end, we propose a novel optimization approach for MTL, named GDOD, which manipulates gradients of each task using an orthogonal basis decomposed from the span of all task gradients. GDOD decomposes gradients into task-shared and task-conflict components explicitly and adopts a general update rule for avoiding interference across all task gradients. This allows guiding the update directions depending on the task-shared components. Moreover, we prove the convergence of GDOD theoretically under both convex and non-convex assumptions. Experiment results on several multi-task datasets not only demonstrate the significant improvement of GDOD performed to existing MTL models but also prove that our algorithm outperforms state-of-the-art optimization methods in terms of AUC and Logloss metrics.


Model Interpolation with Trans-dimensional Random Field Language Models for Speech Recognition

arXiv.org Machine Learning

The dominant language models (LMs) such as n-gram and neural network (NN) models represent sentence probabilities in terms of conditionals. In contrast, a new trans-dimensional random field (TRF) LM has been recently introduced to show superior performances, where the whole sentence is modeled as a random field. In this paper, we examine how the TRF models can be interpolated with the NN models, and obtain 12.1\% and 17.9\% relative error rate reductions over 6-gram LMs for English and Chinese speech recognition respectively through log-linear combination.