We propose a novel hierarchical model for multitask bipartite ranking. The proposed approach combines a matrix-variate Gaussian process with a generative model for task-wise bipartite ranking. In addition, we employ a novel trace constrained variational inference approach to impose low rank structure on the posterior matrix-variate Gaussian process. The resulting posterior covariance function is derived in closed form, and the posterior mean function is the solution to a matrix-variate regression with a novel spectral elastic net regularizer. Further, we show that variational inference for the trace constrained matrix-variate Gaussian process combined with maximum likelihood parameter estimation for the bipartite ranking model is jointly convex. Our motivating application is the prioritization of candidate disease genes. The goal of this task is to aid the identification of unobserved associations between human genes and diseases using a small set of observed associations as well as kernels induced by gene-gene interaction networks and disease ontologies. Our experimental results illustrate the performance of the proposed model on real world datasets. Moreover, we find that the resulting low rank solution improves the computational scalability of training and testing as compared to baseline models.

Unsupervised models can provide supplementary soft constraints to help classify new target data under the assumption that similar objects in the target set are more likely to share the same class label. Such models can also help detect possible differences between training and target distributions, which is useful in applications where concept drift may take place. This paper describes a Bayesian framework that takes as input class labels from existing classifiers (designed based on labeled data from the source domain), as well as cluster labels from a cluster ensemble operating solely on the target data to be classified, and yields a consensus labeling of the target data. This framework is particularly useful when the statistics of the target data drift or change from those of the training data. We also show that the proposed framework is privacy-aware and allows performing distributed learning when data/models have sharing restrictions. Experiments show that our framework can yield superior results to those provided by applying classifier ensembles only.

This paper introduces a novel approach for learning to rank (LETOR) based on the notion of monotone retargeting. It involves minimizing a divergence between all monotonic increasing transformations of the training scores and a parameterized prediction function. The minimization is both over the transformations as well as over the parameters. It is applied to Bregman divergences, a large class of "distance like" functions that were recently shown to be the unique class that is statistically consistent with the normalized discounted gain (NDCG) criterion [19]. The algorithm uses alternating projection style updates, in which one set of simultaneous projections can be computed independent of the Bregman divergence and the other reduces to parameter estimation of a generalized linear model. This results in easily implemented, efficiently parallelizable algorithm for the LETOR task that enjoys global optimum guarantees under mild conditions. We present empirical results on benchmark datasets showing that this approach can outperform the state of the art NDCG consistent techniques.

This paper introduces a privacy-aware Bayesian approach that combines ensembles of classifiers and clusterers to perform semi-supervised and transductive learning. We consider scenarios where instances and their classification/clustering results are distributed across different data sites and have sharing restrictions. As a special case, the privacy aware computation of the model when instances of the target data are distributed across different data sites, is also discussed. Experimental results show that the proposed approach can provide good classification accuracies while adhering to the data/model sharing constraints.

We propose a generative model for high dimensional data consisting of intrinsically low dimensional clusters that are noisily sampled. The proposed model is a mixture of probabilistic principal surfaces (MiPPS) optimized using expectation maximization. We use a Bayesian prior on the model parameters to maximize the corresponding marginal likelihood. We also show empirically that this optimization can be biased towards a good local optimum by using our prior intuition to guide the initialization phase The proposed unsupervised algorithm naturally handles cases where the data lies on multiple connected components of a single manifold and where the component manifolds intersect. In addition to clustering, we learn a functional model for the underlying structure of each component cluster as a parameterized hyper-surface in ambient noise.This model is used to learn a global embedding that we use for visualization of the entire dataset. We demonstrate the performance of MiPPS in separating and visualizing land cover types in a hyperspectral dataset.

The mortality related to cervical cancer can be substantially reduced through early detection and treatment. However, current detection techniques, such as Pap smear and colposcopy, fail to achieve a concurrently high sensitivity and specificity. In vivo fluorescence spectroscopy is a technique which quickly, noninvasively and quantitatively probes the biochemical and morphological changes that occur in precancerous tissue. RBF ensemble algorithms based on such spectra provide automated, and near realtime implementation of pre-cancer detection in the hands of nonexperts. The results are more reliable, direct and accurate than those achieved by either human experts or multivariate statistical algorithms. 1 Introduction Cervical carcinoma is the second most common cancer in women worldwide, exceeded only by breast cancer (Ramanujam et al., 1996). The mortality related to cervical cancer can be reduced if this disease is detected at the precancerous state, known as squamous intraepitheliallesion (SIL). Currently, a Pap smear is used to 982 K. Turner, N. Ramanujam, R. Richards-Kortum and J. Ghosh screen for cervical cancer {Kurman et al., 1994}. In a Pap test, a large number of cells obtained by scraping the cervical epithelium are smeared onto a slide which is then fixed and stained for cytologic examination.

The mortality related to cervical cancer can be substantially reduced throughearly detection and treatment. However, current detection techniques, such as Pap smear and colposcopy, fail to achieve a concurrently high sensitivity and specificity. In vivo fluorescence spectroscopy is a technique which quickly, noninvasively andquantitatively probes the biochemical and morphological changes that occur in precancerous tissue. RBF ensemble algorithms based on such spectra provide automated, and near realtime implementationof pre-cancer detection in the hands of nonexperts. Theresults are more reliable, direct and accurate than those achieved by either human experts or multivariate statistical algorithms. 1 Introduction Cervical carcinoma is the second most common cancer in women worldwide, exceeded onlyby breast cancer (Ramanujam et al., 1996). The mortality related to cervical cancer can be reduced if this disease is detected at the precancerous state, known as squamous intraepitheliallesion (SIL).

The mortality related to cervical cancer can be substantially reduced through early detection and treatment. However, current detection techniques, such as Pap smear and colposcopy, fail to achieve a concurrently high sensitivity and specificity. In vivo fluorescence spectroscopy is a technique which quickly, noninvasively and quantitatively probes the biochemical and morphological changes that occur in precancerous tissue. RBF ensemble algorithms based on such spectra provide automated, and near realtime implementation of pre-cancer detection in the hands of nonexperts. The results are more reliable, direct and accurate than those achieved by either human experts or multivariate statistical algorithms. 1 Introduction Cervical carcinoma is the second most common cancer in women worldwide, exceeded only by breast cancer (Ramanujam et al., 1996). The mortality related to cervical cancer can be reduced if this disease is detected at the precancerous state, known as squamous intraepitheliallesion (SIL). Currently, a Pap smear is used to 982 K. Turner, N. Ramanujam, R. Richards-Kortum and J. Ghosh screen for cervical cancer {Kurman et al., 1994}. In a Pap test, a large number of cells obtained by scraping the cervical epithelium are smeared onto a slide which is then fixed and stained for cytologic examination.