Lessons from Bayesian disease diagnosis: Don't over-interpret the Bayes factor, VERSION 2

This revision has corrected derivations, new R/JAGS code, and new diagrams.] Overview "Captain, the prior probability of this character dying and leaving the show is infinitesimal." A primary example of Bayes' rule is for disease diagnosis (or illicit drug screening). The example is invoked routinely to explain the importance of prior probabilities. Here's one version of it: Suppose a diagnostic test has a 97% detection rate and a 5% false alarm rate.