A Proof of proposition

Let's assume we apply a random CCW torsion rotation of angle We detail here the formulae used in section section 2.4. Similar to AlphaFold [Senior et al., 2020], we fit distances using normal distributions and angles Such cases require a special treatment. So far, we haven't tackled the following difficulty: Examples are hydrogen groups as in Figure 1. We propose a new loss function based on eq. The EMD computation cannot be parallelized in mini-batches in the current version of the library, but everything else is batch-parallelizable in our model (e.g., The training stage happens without assembling the full conformer.