We introduce the Gaussian Process Convolution Model (GPCM), a two-stage nonparametric generative procedure to model stationary signals as the convolution between a continuous-time white-noise process and a continuous-time linear filter drawn from Gaussian process. The GPCM is a continuous-time nonparametricwindow moving average process and, conditionally, is itself a Gaussian process with a nonparametric kernel defined in a probabilistic fashion. The generative model can be equivalently considered in the frequency domain, where the power spectral density of the signal is specified using a Gaussian process. One of the main contributions of the paper is to develop a novel variational freeenergy approach based on inter-domain inducing variables that efficiently learns the continuous-time linear filter and infers the driving white-noise process. In turn, this scheme provides closed-form probabilistic estimates of the covariance kernel and the noise-free signal both in denoising and prediction scenarios. Additionally, the variational inference procedure provides closed-form expressions for the approximate posterior of the spectral density given the observed data, leading to new Bayesian nonparametric approaches to spectrum estimation. The proposed GPCM is validated using synthetic and real-world signals.

We propose Kernel Hamiltonian Monte Carlo (KMC), a gradient-free adaptive MCMC algorithm based on Hamiltonian Monte Carlo (HMC). On target densities where classical HMC is not an option due to intractable gradients, KMC adaptively learns the target's gradient structure by fitting an exponential family model in a Reproducing Kernel Hilbert Space. Computational costs are reduced by two novel efficient approximations to this gradient. While being asymptotically exact, KMC mimics HMC in terms of sampling efficiency, and offers substantial mixing improvements over state-of-the-art gradient free samplers. We support our claims with experimental studies on both toy and real-world applications, including Approximate Bayesian Computation and exact-approximate MCMC.

Matrix factorization (MF) collaborative filtering is an effective and widely used method in recommendation systems. However, the problem of finding an optimal trade-off between exploration and exploitation (otherwise known as the bandit problem), a crucial problem in collaborative filtering from cold-start, has not been previously addressed. In this paper, we present a novel algorithm for online MF recommendation that automatically combines finding the most relevant items with exploring new or less-recommended items. Our approach, called Particle Thompson sampling for MF (PTS), is based on the general Thompson sampling framework, but augmented with a novel efficient online Bayesian probabilistic matrix factorization method based on the Rao-Blackwellized particle filter. Extensive experiments in collaborative filtering using several real-world datasets demonstrate that PTS significantly outperforms the current state-of-the-arts.

Learning the structure of a probabilistic graphical models is a well studied problem in the machine learning community due to its importance in many applications. Current approaches are mainly focused on learning the structure under restrictive parametric assumptions, which limits the applicability of these methods. In this paper, we study the problem of estimating the structure of a probabilistic graphical model without assuming a particular parametric model. We consider probabilities that are members of an infinite dimensional exponential family [4], which is parametrized by a reproducing kernel Hilbert space (RKHS) H and its kernel k. One difficulty in learning nonparametric densities is the evaluation of the normalizing constant. In order to avoid this issue, our procedure minimizes the penalized score matching objective [10, 11]. We show how to efficiently minimize the proposed objective using existing group lasso solvers. Furthermore, we prove that our procedure recovers the graph structure with high-probability under mild conditions. Simulation studies illustrate ability of our procedure to recover the true graph structure without the knowledge of the data generating process.

Hamiltonian Monte Carlo (HMC) is a successful approach for sampling from continuous densities. However, it has difficulty simulating Hamiltonian dynamics with non-smooth functions, leading to poor performance. This paper is motivated by the behavior of Hamiltonian dynamics in physical systems like optics. We introduce a modification of the Leapfrog discretization of Hamiltonian dynamics on piecewise continuous energies, where intersections of the trajectory with discontinuities are detected, and the momentum is reflected or refracted to compensate for the change in energy. We prove that this method preserves the correct stationary distribution when boundaries are affine. Experiments show that by reducing the number of rejected samples, this method improves on traditional HMC.

We present a data-driven optimal control framework that is derived using the path integral (PI) control approach. We find iterative control laws analytically without a priori policy parameterization based on probabilistic representation of the learned dynamics model. The proposed algorithm operates in a forward-backward manner which differentiate it from other PI-related methods that perform forward sampling to find optimal controls. Our method uses significantly less samples to find analytic control laws compared to other approaches within the PI control family that rely on extensive sampling from given dynamics models or trials on physical systems in a model-free fashion. In addition, the learned controllers can be generalized to new tasks without re-sampling based on the compositionality theory for the linearly-solvable optimal control framework. We provide experimental results on three different tasks and comparisons with state-of-the-art model-based methods to demonstrate the efficiency and generalizability of the proposed framework.

We present a scalable Bayesian multi-label learning model based on learning lowdimensional label embeddings. Our model assumes that each label vector is generated as a weighted combination of a set of topics (each topic being a distribution over labels), where the combination weights (i.e., the embeddings) for each label vector are conditioned on the observed feature vector. This construction, coupled with a Bernoulli-Poisson link function for each label of the binary label vector, leads to a model with a computational cost that scales in the number of positive labels in the label matrix. This makes the model particularly appealing for real-world multi-label learning problems where the label matrix is usually very massive but highly sparse. Using a data-augmentation strategy leads to full local conjugacy in our model, facilitating simple and very efficient Gibbs sampling, as well as an Expectation Maximization algorithm for inference. Also, predicting the label vector at test time does not require doing an inference for the label embeddings and can be done in closed form. We report results on several benchmark data sets, comparing our model with various state-of-the art methods.

We consider the estimation of sparse graphical models that characterize the dependency structure of high-dimensional tensor-valued data. To facilitate the estimation of the precision matrix corresponding to each way of the tensor, we assume the data follow a tensor normal distribution whose covariance has a Kronecker product structure. The penalized maximum likelihood estimation of this model involves minimizing a non-convex objective function. In spite of the non-convexity of this estimation problem, we prove that an alternating minimization algorithm, which iteratively estimates each sparse precision matrix while fixing the others, attains an estimator with the optimal statistical rate of convergence as well as consistent graph recovery. Notably, such an estimator achieves estimation consistency with only one tensor sample, which is unobserved in previous work. Our theoretical results are backed by thorough numerical studies.

Perception is often described as a predictive process based on an optimal inference with respect to a generative model. We study here the principled construction of a generative model specifically crafted to probe motion perception. In that context, we first provide an axiomatic, biologically-driven derivation of the model. This model synthesizes random dynamic textures which are defined by stationary Gaussian distributions obtained by the random aggregation of warped patterns. Importantly, we show that this model can equivalently be described as a stochastic partial differential equation. Using this characterization of motion in images, it allows us to recast motion-energy models into a principled Bayesian inference framework. Finally, we apply these textures in order to psychophysically probe speed perception in humans. In this framework, while the likelihood is derived from the generative model, the prior is estimated from the observed results and accounts for the perceptual bias in a principled fashion.

Gaussian process (GP) models form a core part of probabilistic machine learning. Considerable research effort has been made into attacking three issues with GP models: how to compute efficiently when the number of data is large; how to approximate the posterior when the likelihood is not Gaussian and how to estimate covariance function parameter posteriors. This paper simultaneously addresses these, using a variational approximation to the posterior which is sparse in support of the function but otherwise free-form. The result is a Hybrid Monte-Carlo sampling scheme which allows for a non-Gaussian approximation over the function values and covariance parameters simultaneously, with efficient computations based on inducing-point sparse GPs. Code to replicate each experiment in this paper is available at github.com/sparseMCMC.