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 Uncertainty



Approximability of Probability Distributions

Neural Information Processing Systems

We consider the question of how well a given distribution can be approximated withprobabilistic graphical models. We introduce a new parameter, effective treewidth, that captures the degree of approximability as a tradeoff between the accuracy and the complexity of approximation. We present a simple approach to analyzing achievable tradeoffs that exploits thethreshold behavior of monotone graph properties, and provide experimental results that support the approach.


Laplace Propagation

Neural Information Processing Systems

We present a novel method for approximate inference in Bayesian models andregularized risk functionals. It is based on the propagation of mean and variance derived from the Laplace approximation of conditional probabilitiesin factorizing distributions, much akin to Minka's Expectation Propagation. In the jointly normal case, it coincides with the latter and belief propagation, whereas in the general case, it provides an optimization strategy containing Support Vector chunking, the Bayes Committee Machine, and Gaussian Process chunking as special cases.



Approximate Expectation Maximization

Neural Information Processing Systems

The E-step boils down to computing probabilities of the hidden variables given the observed variables (evidence) and current set of parameters. The M-step then, given these probabilities, yields a new set of parameters guaranteed to increase the likelihood. In Bayesian networks, that will be the focus of this article, the M-step is usually relatively straightforward. A complication may arise in the E-step, when computing the probability of the hidden variables given the evidence becomes intractable. An often used approach is to replace the exact yet intractable inference in the E step with approximate inference, either through sampling or using a deterministic variational method. The use of a "mean-field" variational method in this context leads to an algorithm known as variational EM and can be given theinterpretation of minimizing a free energy with respect to both a tractable approximate distribution (approximate E-step) and the parameters (M-step) [2]. Loopy belief propagation [3] and variants thereof, such as generalized belief propagation [4]and expectation propagation [5], have become popular alternatives to the "mean-field" variational approaches, often yielding somewhat better approximations. Andindeed, they can and have been applied for approximate inference in the E-step of the EM algorithm (see e.g.


On the Concentration of Expectation and Approximate Inference in Layered Networks

Neural Information Processing Systems

We present an analysis of concentration-of-expectation phenomena in layered Bayesian networks that use generalized linear models as the local conditional probabilities. This framework encompasses a wide variety of probability distributions, including both discrete and continuous random variables. We utilize ideas from large deviation analysis and the delta method to devise and evaluate a class of approximate inference algorithms forlayered Bayesian networks that have superior asymptotic error bounds and very fast computation time.


Estimating Internal Variables and Paramters of a Learning Agent by a Particle Filter

Neural Information Processing Systems

When we model a higher order functions, such as learning and memory, we face a difficulty of comparing neural activities with hidden variables that depend on the history of sensory and motor signals and the dynamics ofthe network. Here, we propose novel method for estimating hidden variables of a learning agent, such as connection weights from sequences of observable variables. Bayesian estimation is a method to estimate the posterior probability of hidden variables from observable data sequence using a dynamic model of hidden and observable variables.


Warped Gaussian Processes

Neural Information Processing Systems

This allows for non-Gaussian processes and non-Gaussian noise. The learning algorithm choosesa nonlinear transformation such that transformed data is well-modelled by a GP. This can be seen as including a preprocessing transformation as an integral part of the probabilistic modelling problem, rather than as an ad-hoc step. We demonstrate on several real regression problems that learning the transformation can lead to significantly better performance than using a regular GP, or a GP with a fixed transformation.


Computing Gaussian Mixture Models with EM Using Equivalence Constraints

Neural Information Processing Systems

Density estimation with Gaussian Mixture Models is a popular generative techniqueused also for clustering. We develop a framework to incorporate side information in the form of equivalence constraints into the model estimation procedure. Equivalence constraints are defined on pairs of data points, indicating whether the points arise from the same source (positive constraints) or from different sources (negative constraints). Suchconstraints can be gathered automatically in some learning problems, and are a natural form of supervision in others. For the estimation of model parameters we present a closed form EM procedure which handles positive constraints, and a Generalized EM procedure using aMarkov net which handles negative constraints. Using publicly available data sets we demonstrate that such side information can lead to considerable improvement in clustering tasks, and that our algorithm is preferable to two other suggested methods using the same type of side information.