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 Uncertainty


Fast Bayesian Inference for Non-Conjugate Gaussian Process Regression

Neural Information Processing Systems

We present a new variational inference algorithm for Gaussian process regression withnon-conjugate likelihood functions, with application to a wide array of problems including binary and multi-class classification, and ordinal regression. Our method constructs a concave lower bound that is optimized using an efficient fixed-point updating algorithm. We show that the new algorithm has highly competitive computationalcomplexity, matching that of alternative approximate inference methods. We also prove that the use of concave variational bounds provides stable and guaranteed convergence - a property not available to other approaches. We show empirically for both binary and multi-class classification that our new algorithm converges much faster than existing variational methods, and without any degradation in performance.


A Marginalized Particle Gaussian Process Regression

Neural Information Processing Systems

We present a novel marginalized particle Gaussian process (MPGP) regression, which provides a fast, accurate online Bayesian filtering framework to model the latent function. Using a state space model established by the data construction procedure, our MPGP recursively filters out the estimation of hidden function values by a Gaussian mixture. Meanwhile, it provides a new online method for training hyperparameters with a number of weighted particles. We demonstrate the estimated performance of our MPGP on both simulated and real large data sets. The results show that our MPGP is a robust estimation algorithm with high computational efficiency, which outperforms other state-of-art sparse GP methods.


Bayesian nonparametric models for ranked data

Neural Information Processing Systems

We develop a Bayesian nonparametric extension of the popular Plackett-Luce choice model that can handle an infinite number of choice items. Our framework is based on the theory of random atomic measures, with the prior specified by a gamma process. We derive a posterior characterization and a simple and effective Gibbs sampler for posterior simulation. We then develop a time-varying extension of our model, and apply our model to the New York Times lists of weekly bestselling books.


Label Ranking with Partial Abstention based on Thresholded Probabilistic Models

Neural Information Processing Systems

Several machine learning methods allow for abstaining from uncertain predictions. While being common for settings like conventional classification, abstention has been studied much less in learning to rank. We address abstention for the label ranking setting, allowing the learner to declare certain pairs of labels as being incomparable and, thus, to predict partial instead of total orders. In our method, such predictions are produced via thresholding the probabilities of pairwise preferences between labels, as induced by a predicted probability distribution on the set of all rankings. We formally analyze this approach for the Mallows and the Plackett-Luce model, showing that it produces proper partial orders as predictions and characterizing the expressiveness of the induced class of partial orders. These theoretical results are complemented by experiments demonstrating the practical usefulness of the approach.


Persistent Homology for Learning Densities with Bounded Support

Neural Information Processing Systems

We present a novel method for learning densities with bounded support which enables us to incorporate `hard' topological constraints. In particular, we show how emerging techniques from computational algebraic topology and the notion of Persistent Homology can be combined with kernel based methods from Machine Learning for the purpose of density estimation. The proposed formalism facilitates learning of models with bounded support in a principled way, and -- by incorporating Persistent Homology techniques in our approach -- we are able to encode algebraic-topological constraints which are not addressed in current state-of the art probabilistic models. We study the behaviour of our method on two synthetic examples for various sample sizes and exemplify the benefits of the proposed approach on a real-world data-set by learning a motion model for a racecar. We show how to learn a model which respects the underlying topological structure of the racetrack, constraining the trajectories of the car.


Efficient Bayes-Adaptive Reinforcement Learning using Sample-Based Search

Neural Information Processing Systems

Bayesian model-based reinforcement learning is a formally elegant approach to learning optimal behaviour under model uncertainty, trading off exploration and exploitation in an ideal way. Unfortunately, finding the resulting Bayes-optimal policies is notoriously taxing, since the search space becomes enormous. In this paper we introduce a tractable, sample-based method for approximate Bayes-optimal planning which exploits Monte-Carlo tree search. Our approach outperformed prior Bayesian model-based RL algorithms by a significant margin on several well-known benchmark problems -- because it avoids expensive applications of Bayes rule within the search tree by lazily sampling models from the current beliefs. We illustrate the advantages of our approach by showing it working in an infinite state space domain which is qualitatively out of reach of almost all previous work in Bayesian exploration.


Learning with Target Prior

Neural Information Processing Systems

In the conventional approaches for supervised parametric learning, relations between data and target variables are provided through training sets consisting of pairs of corresponded data and target variables. In this work, we describe a new learning scheme for parametric learning, in which the target variables $\y$ can be modeled with a prior model $p(\y)$ and the relations between data and target variables are estimated through $p(\y)$ and a set of uncorresponded data $\x$ in training. We term this method as learning with target priors (LTP). Specifically, LTP learning seeks parameter $\t$ that maximizes the log likelihood of $f_\t(\x)$ on a uncorresponded training set with regards to $p(\y)$. Compared to the conventional (semi)supervised learning approach, LTP can make efficient use of prior knowledge of the target variables in the form of probabilistic distributions, and thus removes/reduces the reliance on training data in learning. Compared to the Bayesian approach, the learned parametric regressor in LTP can be more efficiently implemented and deployed in tasks where running efficiency is critical, such as on-line BCI signal decoding. We demonstrate the effectiveness of the proposed approach on parametric regression tasks for BCI signal decoding and pose estimation from video.


Entangled Monte Carlo

Neural Information Processing Systems

We propose a novel method for scalable parallelization of SMC algorithms, Entangled Monte Carlo simulation (EMC). EMC avoids the transmission of particles between nodes, and instead reconstructs them from the particle genealogy. In particular, we show that we can reduce the communication to the particle weights for each machine while efficiently maintaining implicit global coherence of the parallel simulation. We explain methods to efficiently maintain a genealogy of particles from which any particle can be reconstructed. We demonstrate using examples from Bayesian phylogenetic that the computational gain from parallelization using EMC significantly outweighs the cost of particle reconstruction. The timing experiments show that reconstruction of particles is indeed much more efficient as compared to transmission of particles.


Fast Variational Inference in the Conjugate Exponential Family

Neural Information Processing Systems

We present a general method for deriving collapsed variational inference algorithms for probabilistic models in the conjugate exponential family. Our method unifies many existing approaches to collapsed variational inference. Our collapsed variational inference leads to a new lower bound on the marginal likelihood. We exploit the information geometry of the bound to derive much faster optimization methods based on conjugate gradients for these models. Our approach is very general and is easily applied to any model where the mean field update equations have been derived. Empirically we show significant speed-ups for probabilistic models optimized using our bound.


A Nonparametric Conjugate Prior Distribution for the Maximizing Argument of a Noisy Function

Neural Information Processing Systems

We propose a novel Bayesian approach to solve stochastic optimization problems that involve finding extrema of noisy, nonlinear functions. Previous work has focused on representing possible functions explicitly, which leads to a two-step procedure of first, doing inference over the function space and second, finding the extrema of these functions. Here we skip the representation step and directly model the distribution over extrema. To this end, we devise a nonparametric conjugate prior based on a kernel regressor.