Uncertainty
Decision Tables Aggregation in Rough Sets Approximation
Chakhar, Salem (University Laval) | Pusceddu, Clara (University of Sassari)
The Dominance-based Rough Set Approach (DRSA) is an extension of Rough Sets Theory to handle multicriteria classification problems by authorizing preference-ordered attributes. The DRSA assumes the existence of a single decision table while real-world decision problems imply generally several experts with different decision tables. The objective of this paper is to propose an algorithm for the aggregation of a set of decision tables, as a first step for approximating these tables. The algorithm is illustrated using real-world data.
Horizon-Independent Optimal Prediction with Log-Loss in Exponential Families
Bartlett, Peter, Grunwald, Peter, Harremoes, Peter, Hedayati, Fares, Kotlowski, Wojciech
We study online learning under logarithmic loss with regular parametric models. Hedayati and Bartlett (2012b) showed that a Bayesian prediction strategy with Jeffreys prior and sequential normalized maximum likelihood (SNML) coincide and are optimal if and only if the latter is exchangeable, and if and only if the optimal strategy can be calculated without knowing the time horizon in advance. They put forward the question what families have exchangeable SNML strategies. This paper fully answers this open problem for one-dimensional exponential families. The exchangeability can happen only for three classes of natural exponential family distributions, namely the Gaussian, Gamma, and the Tweedie exponential family of order 3/2. Keywords: SNML Exchangeability, Exponential Family, Online Learning, Logarithmic Loss, Bayesian Strategy, Jeffreys Prior, Fisher Information1
Efficient Density Estimation via Piecewise Polynomial Approximation
Chan, Siu-On, Diakonikolas, Ilias, Servedio, Rocco A., Sun, Xiaorui
We give a highly efficient "semi-agnostic" algorithm for learning univariate probability distributions that are well approximated by piecewise polynomial density functions. Let $p$ be an arbitrary distribution over an interval $I$ which is $\tau$-close (in total variation distance) to an unknown probability distribution $q$ that is defined by an unknown partition of $I$ into $t$ intervals and $t$ unknown degree-$d$ polynomials specifying $q$ over each of the intervals. We give an algorithm that draws $\tilde{O}(t\new{(d+1)}/\eps^2)$ samples from $p$, runs in time $\poly(t,d,1/\eps)$, and with high probability outputs a piecewise polynomial hypothesis distribution $h$ that is $(O(\tau)+\eps)$-close (in total variation distance) to $p$. This sample complexity is essentially optimal; we show that even for $\tau=0$, any algorithm that learns an unknown $t$-piecewise degree-$d$ probability distribution over $I$ to accuracy $\eps$ must use $\Omega({\frac {t(d+1)} {\poly(1 + \log(d+1))}} \cdot {\frac 1 {\eps^2}})$ samples from the distribution, regardless of its running time. Our algorithm combines tools from approximation theory, uniform convergence, linear programming, and dynamic programming. We apply this general algorithm to obtain a wide range of results for many natural problems in density estimation over both continuous and discrete domains. These include state-of-the-art results for learning mixtures of log-concave distributions; mixtures of $t$-modal distributions; mixtures of Monotone Hazard Rate distributions; mixtures of Poisson Binomial Distributions; mixtures of Gaussians; and mixtures of $k$-monotone densities. Our general technique yields computationally efficient algorithms for all these problems, in many cases with provably optimal sample complexities (up to logarithmic factors) in all parameters.
Structure Discovery in Nonparametric Regression through Compositional Kernel Search
Duvenaud, David, Lloyd, James Robert, Grosse, Roger, Tenenbaum, Joshua B., Ghahramani, Zoubin
Despite its importance, choosing the structural form of the kernel in nonparametric regression remains a black art. We define a space of kernel structures which are built compositionally by adding and multiplying a small number of base kernels. We present a method for searching over this space of structures which mirrors the scientific discovery process. The learned structures can often decompose functions into interpretable components and enable long-range extrapolation on time-series datasets. Our structure search method outperforms many widely used kernels and kernel combination methods on a variety of prediction tasks.
Mean field variational Bayesian inference for support vector machine classification
A mean field variational Bayes approach to support vector machines (SVMs) using the latent variable representation on Polson & Scott (2012) is presented. This representation allows circumvention of many of the shortcomings associated with classical SVMs including automatic penalty parameter selection, the ability to handle dependent samples, missing data and variable selection. We demonstrate on simulated and real datasets that our approach is easily extendable to non-standard situations and outperforms the classical SVM approach whilst remaining computationally efficient.
Revisiting Bayesian Blind Deconvolution
Blind deconvolution involves the estimation of a sharp signal or image given only a blurry observation. Because this problem is fundamentally ill-posed, strong priors on both the sharp image and blur kernel are required to regularize the solution space. While this naturally leads to a standard MAP estimation framework, performance is compromised by unknown trade-off parameter settings, optimization heuristics, and convergence issues stemming from non-convexity and/or poor prior selections. To mitigate some of these problems, a number of authors have recently proposed substituting a variational Bayesian (VB) strategy that marginalizes over the high-dimensional image space leading to better estimates of the blur kernel. However, the underlying cost function now involves both integrals with no closed-form solution and complex, function-valued arguments, thus losing the transparency of MAP. Beyond standard Bayesian-inspired intuitions, it thus remains unclear by exactly what mechanism these methods are able to operate, rendering understanding, improvements and extensions more difficult. To elucidate these issues, we demonstrate that the VB methodology can be recast as an unconventional MAP problem with a very particular penalty/prior that couples the image, blur kernel, and noise level in a principled way. This unique penalty has a number of useful characteristics pertaining to relative concavity, local minima avoidance, and scale-invariance that allow us to rigorously explain the success of VB including its existing implementational heuristics and approximations. It also provides strict criteria for choosing the optimal image prior that, perhaps counter-intuitively, need not reflect the statistics of natural scenes. In so doing we challenge the prevailing notion of why VB is successful for blind deconvolution while providing a transparent platform for introducing enhancements.
Kernelized Bayesian Matrix Factorization
Gรถnen, Mehmet, Khan, Suleiman A., Kaski, Samuel
We extend kernelized matrix factorization with a fully Bayesian treatment and with an ability to work with multiple side information sources expressed as different kernels. Kernel functions have been introduced to matrix factorization to integrate side information about the rows and columns (e.g., objects and users in recommender systems), which is necessary for making out-of-matrix (i.e., cold start) predictions. We discuss specifically bipartite graph inference, where the output matrix is binary, but extensions to more general matrices are straightforward. We extend the state of the art in two key aspects: (i) A fully conjugate probabilistic formulation of the kernelized matrix factorization problem enables an efficient variational approximation, whereas fully Bayesian treatments are not computationally feasible in the earlier approaches. (ii) Multiple side information sources are included, treated as different kernels in multiple kernel learning that additionally reveals which side information sources are informative. Our method outperforms alternatives in predicting drug-protein interactions on two data sets. We then show that our framework can also be used for solving multilabel learning problems by considering samples and labels as the two domains where matrix factorization operates on. Our algorithm obtains the lowest Hamming loss values on 10 out of 14 multilabel classification data sets compared to five state-of-the-art multilabel learning algorithms.
Efficient Estimation of the number of neighbours in Probabilistic K Nearest Neighbour Classification
Probabilistic k-nearest neighbour (PKNN) classification has been introduced to improve the performance of original k-nearest neighbour (KNN) classification algorithm by explicitly modelling uncertainty in the classification of each feature vector. However, an issue common to both KNN and PKNN is to select the optimal number of neighbours, $k$. The contribution of this paper is to incorporate the uncertainty in $k$ into the decision making, and in so doing use Bayesian model averaging to provide improved classification. Indeed the problem of assessing the uncertainty in $k$ can be viewed as one of statistical model selection which is one of the most important technical issues in the statistics and machine learning domain. In this paper, a new functional approximation algorithm is proposed to reconstruct the density of the model (order) without relying on time consuming Monte Carlo simulations. In addition, this algorithm avoids cross validation by adopting Bayesian framework. The performance of this algorithm yielded very good performance on several real experimental datasets.
Inference in Kingman's Coalescent with Particle Markov Chain Monte Carlo Method
We propose a new algorithm to do posterior sampling of Kingman's coalescent, based upon the Particle Markov Chain Monte Carlo methodology. Specifically, the algorithm is an instantiation of the Particle Gibbs Sampling method, which alternately samples coalescent times conditioned on coalescent tree structures, and tree structures conditioned on coalescent times via the conditional Sequential Monte Carlo procedure. We implement our algorithm as a C++ package, and demonstrate its utility via a parameter estimation task in population genetics on both single- and multiple-locus data. The experiment results show that the proposed algorithm performs comparable to or better than several well-developed methods.
Mixed LICORS: A Nonparametric Algorithm for Predictive State Reconstruction
Goerg, Georg M., Shalizi, Cosma Rohilla
We introduce 'mixed LICORS', an algorithm for learning nonlinear, high-dimensional dynamics from spatio-temporal data, suitable for both prediction and simulation. Mixed LICORS extends the recent LICORS algorithm (Goerg and Shalizi, 2012) from hard clustering of predictive distributions to a non-parametric, EM-like soft clustering. This retains the asymptotic predictive optimality of LICORS, but, as we show in simulations, greatly improves out-of-sample forecasts with limited data. The new method is implemented in the publicly-available R package "LICORS" (http://cran.r-project.org/web/packages/LICORS/).