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 Uncertainty


Iterative Bayesian Reconstruction of Non-IID Block-Sparse Signals

arXiv.org Machine Learning

This paper presents a novel Block Iterative Bayesian Algorithm (Block-IBA) for reconstructing block-sparse signals with unknown block structures. Unlike the existing algorithms for block sparse signal recovery which assume the cluster structure of the nonzero elements of the unknown signal to be independent and identically distributed (i.i.d.), we use a more realistic Bernoulli-Gaussian hidden Markov model (BGHMM) to characterize the non-i.i.d. block-sparse signals commonly encountered in practice. The Block-IBA iteratively estimates the amplitudes and positions of the block-sparse signal using the steepest-ascent based Expectation-Maximization (EM), and optimally selects the nonzero elements of the block-sparse signal by adaptive thresholding. The global convergence of Block-IBA is analyzed and proved, and the effectiveness of Block-IBA is demonstrated by numerical experiments and simulations on synthetic and real-life data.


Iterative Neural Autoregressive Distribution Estimator (NADE-k)

arXiv.org Machine Learning

Training of the neural autoregressive density estimator (NADE) can be viewed as doing one step of probabilistic inference on missing values in data. We propose a new model that extends this inference scheme to multiple steps, arguing that it is easier to learn to improve a reconstruction in $k$ steps rather than to learn to reconstruct in a single inference step. The proposed model is an unsupervised building block for deep learning that combines the desirable properties of NADE and multi-predictive training: (1) Its test likelihood can be computed analytically, (2) it is easy to generate independent samples from it, and (3) it uses an inference engine that is a superset of variational inference for Boltzmann machines. The proposed NADE-k is competitive with the state-of-the-art in density estimation on the two datasets tested.


Nested Variational Compression in Deep Gaussian Processes

arXiv.org Machine Learning

Deep Gaussian processes provide a flexible approach to probabilistic modelling of data using either supervised or unsupervised learning. For tractable inference approximations to the marginal likelihood of the model must be made. The original approach to approximate inference in these models used variational compression to allow for approximate variational marginalization of the hidden variables leading to a lower bound on the marginal likelihood of the model [Damianou and Lawrence, 2013]. In this paper we extend this idea with a nested variational compression. The resulting lower bound on the likelihood can be easily parallelized or adapted for stochastic variational inference.


Probability Theory without Bayes' Rule

arXiv.org Artificial Intelligence

Within the Kolmogorov theory of probability, Bayes' rule allows one to perform statistical inference by relating conditional probabilities to unconditional probabilities. As we show here, however, there is a continuous set of alternative inference rules that yield the same results, and that may have computational or practical advantages for certain problems. We formulate generalized axioms for probability theory, according to which the reverse conditional probability distribution P(B|A) is not specified by the forward conditional probability distribution P(A|B) and the marginals P(A) and P(B). Thus, in order to perform statistical inference, one must specify an additional "inference axiom," which relates P(B|A) to P(A|B), P(A), and P(B). We show that when Bayes' rule is chosen as the inference axiom, the axioms are equivalent to the classical Kolmogorov axioms. We then derive consistency conditions on the inference axiom, and thereby characterize the set of all possible rules for inference. The set of "first-order" inference axioms, defined as the set of axioms in which P(B|A) depends on the first power of P(A|B), is found to be a 1-simplex, with Bayes' rule at one of the extreme points. The other extreme point, the "inversion rule," is studied in depth.


Fuzzy human motion analysis: A review

arXiv.org Artificial Intelligence

Human Motion Analysis (HMA) is currently one of the most popularly active research domains as such significant research interests are motivated by a number of real world applications such as video surveillance, sports analysis, healthcare monitoring and so on. However, most of these real world applications face high levels of uncertainties that can affect the operations of such applications. Hence, the fuzzy set theory has been applied and showed great success in the recent past. In this paper, we aim at reviewing the fuzzy set oriented approaches for HMA, individuating how the fuzzy set may improve the HMA, envisaging and delineating the future perspectives. To the best of our knowledge, there is not found a single survey in the current literature that has discussed and reviewed fuzzy approaches towards the HMA. For ease of understanding, we conceptually classify the human motion into three broad levels: Low-Level (LoL), Mid-Level (MiL), and High-Level (HiL) HMA.


CAM: Causal additive models, high-dimensional order search and penalized regression

arXiv.org Machine Learning

We develop estimation for potentially high-dimensional additive structural equation models. A key component of our approach is to decouple order search among the variables from feature or edge selection in a directed acyclic graph encoding the causal structure. We show that the former can be done with nonregularized (restricted) maximum likelihood estimation while the latter can be efficiently addressed using sparse regression techniques. Thus, we substantially simplify the problem of structure search and estimation for an important class of causal models. We establish consistency of the (restricted) maximum likelihood estimator for low- and high-dimensional scenarios, and we also allow for misspecification of the error distribution. Furthermore, we develop an efficient computational algorithm which can deal with many variables, and the new method's accuracy and performance is illustrated on simulated and real data.


Efficiently learning Ising models on arbitrary graphs

arXiv.org Machine Learning

We consider the problem of reconstructing the graph underlying an Ising model from i.i.d. samples. Over the last fifteen years this problem has been of significant interest in the statistics, machine learning, and statistical physics communities, and much of the effort has been directed towards finding algorithms with low computational cost for various restricted classes of models. Nevertheless, for learning Ising models on general graphs with $p$ nodes of degree at most $d$, it is not known whether or not it is possible to improve upon the $p^{d}$ computation needed to exhaustively search over all possible neighborhoods for each node. In this paper we show that a simple greedy procedure allows to learn the structure of an Ising model on an arbitrary bounded-degree graph in time on the order of $p^2$. We make no assumptions on the parameters except what is necessary for identifiability of the model, and in particular the results hold at low-temperatures as well as for highly non-uniform models. The proof rests on a new structural property of Ising models: we show that for any node there exists at least one neighbor with which it has a high mutual information. This structural property may be of independent interest.


Lifted Probabilistic Inference for Asymmetric Graphical Models

arXiv.org Artificial Intelligence

Lifted probabilistic inference algorithms have been successfully applied to a large number of symmetric graphical models. Unfortunately, the majority of real-world graphical models is asymmetric. This is even the case for relational representations when evidence is given. Therefore, more recent work in the community moved to making the models symmetric and then applying existing lifted inference algorithms. However, this approach has two shortcomings. First, all existing over-symmetric approximations require a relational representation such as Markov logic networks. Second, the induced symmetries often change the distribution significantly, making the computed probabilities highly biased. We present a framework for probabilistic sampling-based inference that only uses the induced approximate symmetries to propose steps in a Metropolis-Hastings style Markov chain. The framework, therefore, leads to improved probability estimates while remaining unbiased. Experiments demonstrate that the approach outperforms existing MCMC algorithms.


Efficient inference of overlapping communities in complex networks

arXiv.org Machine Learning

We discuss two views on extending existing methods for complex network modeling which we dub the communities first and the networks first view, respectively. Inspired by the networks first view that we attribute to White, Boorman, and Breiger (1976)[1], we formulate the multiple-networks stochastic blockmodel (MNSBM), which seeks to separate the observed network into subnetworks of different types and where the problem of inferring structure in each subnetwork becomes easier. We show how this model is specified in a generative Bayesian framework where parameters can be inferred efficiently using Gibbs sampling. The result is an effective multiple-membership model without the drawbacks of introducing complex definitions of "groups" and how they interact. We demonstrate results on the recovery of planted structure in synthetic networks and show very encouraging results on link prediction performances using multiple-networks models on a number of real-world network data sets.


A Nonparametric Bayesian Approach to Uncovering Rat Hippocampal Population Codes During Spatial Navigation

arXiv.org Machine Learning

Rodent hippocampal population codes represent important spatial information about the environment during navigation. Several computational methods have been developed to uncover the neural representation of spatial topology embedded in rodent hippocampal ensemble spike activity. Here we extend our previous work and propose a nonparametric Bayesian approach to infer rat hippocampal population codes during spatial navigation. To tackle the model selection problem, we leverage a nonparametric Bayesian model. Specifically, to analyze rat hippocampal ensemble spiking activity, we apply a hierarchical Dirichlet process-hidden Markov model (HDP-HMM) using two Bayesian inference methods, one based on Markov chain Monte Carlo (MCMC) and the other based on variational Bayes (VB). We demonstrate the effectiveness of our Bayesian approaches on recordings from a freely-behaving rat navigating in an open field environment. We find that MCMC-based inference with Hamiltonian Monte Carlo (HMC) hyperparameter sampling is flexible and efficient, and outperforms VB and MCMC approaches with hyperparameters set by empirical Bayes.