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 Uncertainty


Quantifying the probable approximation error of probabilistic inference programs

arXiv.org Machine Learning

This paper introduces a new technique for quantifying the approximation error of a broad class of probabilistic inference programs, including ones based on both variational and Monte Carlo approaches. The key idea is to derive a subjective bound on the symmetrized KL divergence between the distribution achieved by an approximate inference program and its true target distribution. The bound's validity (and subjectivity) rests on the accuracy of two auxiliary probabilistic programs: (i) a "reference" inference program that defines a gold standard of accuracy and (ii) a "meta-inference" program that answers the question "what internal random choices did the original approximate inference program probably make given that it produced a particular result?" The paper includes empirical results on inference problems drawn from linear regression, Dirichlet process mixture modeling, HMMs, and Bayesian networks. The experiments show that the technique is robust to the quality of the reference inference program and that it can detect implementation bugs that are not apparent from predictive performance.


Robust Gaussian Filtering using a Pseudo Measurement

arXiv.org Machine Learning

Many sensors, such as range, sonar, radar, GPS and visual devices, produce measurements which are contaminated by outliers. This problem can be addressed by using fat-tailed sensor models, which account for the possibility of outliers. Unfortunately, all estimation algorithms belonging to the family of Gaussian filters (such as the widely-used extended Kalman filter and unscented Kalman filter) are inherently incompatible with such fat-tailed sensor models. The contribution of this paper is to show that any Gaussian filter can be made compatible with fat-tailed sensor models by applying one simple change: Instead of filtering with the physical measurement, we propose to filter with a pseudo measurement obtained by applying a feature function to the physical measurement. We derive such a feature function which is optimal under some conditions. Simulation results show that the proposed method can effectively handle measurement outliers and allows for robust filtering in both linear and nonlinear systems.


Hierarchical Variational Models

arXiv.org Machine Learning

Black box variational inference allows researchers to easily prototype and evaluate an array of models. Recent advances allow such algorithms to scale to high dimensions. However, a central question remains: How to specify an expressive variational distribution that maintains efficient computation? To address this, we develop hierarchical variational models (HVMs). HVMs augment a variational approximation with a prior on its parameters, which allows it to capture complex structure for both discrete and continuous latent variables. The algorithm we develop is black box, can be used for any HVM, and has the same computational efficiency as the original approximation. We study HVMs on a variety of deep discrete latent variable models. HVMs generalize other expressive variational distributions and maintains higher fidelity to the posterior.


A New Approach to Building the Interindustry Input--Output Table

arXiv.org Machine Learning

We present a new approach to estimating the interdependence of industries in an economy by applying data science solutions. By exploiting interfirm buyer--seller network data, we show that the problem of estimating the interdependence of industries is similar to the problem of uncovering the latent block structure in network science literature. To estimate the underlying structure with greater accuracy, we propose an extension of the sparse block model that incorporates node textual information and an unbounded number of industries and interactions among them. The latter task is accomplished by extending the well-known Chinese restaurant process to two dimensions. Inference is based on collapsed Gibbs sampling, and the model is evaluated on both synthetic and real-world datasets. We show that the proposed model improves in predictive accuracy and successfully provides a satisfactory solution to the motivated problem. We also discuss issues that affect the future performance of this approach.


Internet of Things and Bayesian Networks

@machinelearnbot

As big data becomes more of cliche with every passing day, do you feel Internet of Things is the next marketing buzzword to grapple our lives. So what exactly is Internet of Thing (IoT) and why are we going to hear more about it in the coming days. Internet of thing (IoT) today denotes advanced connectivity of devices,systems and services that goes beyond machine to machine communications and covers a wide variety of domains and applications specifically in the manufacturing and power, oil and gas utilities. An application in IoT can be an automobile that has built in sensors to alert the driver when the tyre pressure is low. Built-in sensors on equipment's present in the power plant which transmit real time data and thereby enable to better transmission planning,load balancing.


Variational Tempering

arXiv.org Machine Learning

Variational inference (VI) combined with data subsampling enables approximate posterior inference over large data sets, but suffers from poor local optima. We first formulate a deterministic annealing approach for the generic class of conditionally conjugate exponential family models. This approach uses a decreasing temperature parameter which deterministically deforms the objective during the course of the optimization. A well-known drawback to this annealing approach is the choice of the cooling schedule. We therefore introduce variational tempering, a variational algorithm that introduces a temperature latent variable to the model. In contrast to related work in the Markov chain Monte Carlo literature, this algorithm results in adaptive annealing schedules. Lastly, we develop local variational tempering, which assigns a latent temperature to each data point; this allows for dynamic annealing that varies across data. Compared to the traditional VI, all proposed approaches find improved predictive likelihoods on held-out data.


Exploratory Data Analysis โ€“ Kernel Density Estimation and Rug Plots in R

@machinelearnbot

Harlan also noted in the comment below that any truncated kernel density estimator (KDE) from density() in R does not integrate to 1 over its support set. Thanks to Julian Richer Daily for suggesting on AnalyticBridge to scale any truncated kernel density estimator (KDE) from density() by its integral to get a KDE that integrates to 1 over its support set. I have used my own function for trapezoidal integration to do so, and this has been added below. I thank everyone for your patience while I took the time to write a post about numerical integration before posting this correction. I was in the process of moving between jobs and cities when Harlan first brought this issue to my attention, and I had also been planning a major expansion of this blog since then.


Mondrian Forests for Large-Scale Regression when Uncertainty Matters

arXiv.org Machine Learning

Many real-world regression problems demand a measure of the uncertainty associated with each prediction. Standard decision forests deliver efficient state-of-the-art predictive performance, but high-quality uncertainty estimates are lacking. Gaussian processes (GPs) deliver uncertainty estimates, but scaling GPs to large-scale data sets comes at the cost of approximating the uncertainty estimates. We extend Mondrian forests, first proposed by Lakshminarayanan et al. (2014) for classification problems, to the large-scale non-parametric regression setting. Using a novel hierarchical Gaussian prior that dovetails with the Mondrian forest framework, we obtain principled uncertainty estimates, while still retaining the computational advantages of decision forests. Through a combination of illustrative examples, real-world large-scale datasets, and Bayesian optimization benchmarks, we demonstrate that Mondrian forests outperform approximate GPs on large-scale regression tasks and deliver better-calibrated uncertainty assessments than decision-forest-based methods.


Provable Algorithms for Inference in Topic Models

arXiv.org Machine Learning

Recently, there has been considerable progress on designing algorithms with provable guarantees -- typically using linear algebraic methods -- for parameter learning in latent variable models. But designing provable algorithms for inference has proven to be more challenging. Here we take a first step towards provable inference in topic models. We leverage a property of topic models that enables us to construct simple linear estimators for the unknown topic proportions that have small variance, and consequently can work with short documents. Our estimators also correspond to finding an estimate around which the posterior is well-concentrated. We show lower bounds that for shorter documents it can be information theoretically impossible to find the hidden topics. Finally, we give empirical results that demonstrate that our algorithm works on realistic topic models. It yields good solutions on synthetic data and runs in time comparable to a {\em single} iteration of Gibbs sampling.


Combinatorial Topic Models using Small-Variance Asymptotics

arXiv.org Machine Learning

Topic models have emerged as fundamental tools in unsupervised machine learning. Most modern topic modeling algorithms take a probabilistic view and derive inference algorithms based on Latent Dirichlet Allocation (LDA) or its variants. In contrast, we study topic modeling as a combinatorial optimization problem, and propose a new objective function derived from LDA by passing to the small-variance limit. We minimize the derived objective by using ideas from combinatorial optimization, which results in a new, fast, and high-quality topic modeling algorithm. In particular, we show that our results are competitive with popular LDA-based topic modeling approaches, and also discuss the (dis)similarities between our approach and its probabilistic counterparts.