Uncertainty
Semi-supervised Deep Kernel Learning: Regression with Unlabeled Data by Minimizing Predictive Variance
Jean, Neal, Xie, Sang Michael, Ermon, Stefano
Large amounts of labeled data are typically required to train deep learning models. For many real-world problems, however, acquiring additional data can be expensive or even impossible. We present semi-supervised deep kernel learning (SSDKL), a semi-supervised regression model based on minimizing predictive variance in the posterior regularization framework. SSDKL combines the hierarchical representation learning of neural networks with the probabilistic modeling capabilities of Gaussian processes. By leveraging unlabeled data, we show improvements on a diverse set of real-world regression tasks over supervised deep kernel learning and semi-supervised methods such as VAT and mean teacher adapted for regression.
BRUNO: A Deep Recurrent Model for Exchangeable Data
Korshunova, Iryna, Degrave, Jonas, Huszar, Ferenc, Gal, Yarin, Gretton, Arthur, Dambre, Joni
We present a novel model architecture which leverages deep learning tools to perform exact Bayesian inference on sets of high dimensional, complex observations. Our model is provably exchangeable, meaning that the joint distribution over observations is invariant under permutation: this property lies at the heart of Bayesian inference. The model does not require variational approximations to train, and new samples can be generated conditional on previous samples, with cost linear in the size of the conditioning set. The advantages of our architecture are demonstrated on learning tasks that require generalisation from short observed sequences while modelling sequence variability, such as conditional image generation, few-shot learning, and anomaly detection.
A General Method for Amortizing Variational Filtering
Marino, Joseph, Cvitkovic, Milan, Yue, Yisong
We introduce the variational filtering EM algorithm, a simple, general-purpose method for performing variational inference in dynamical latent variable models using information from only past and present variables, i.e. filtering. The algorithm is derived from the variational objective in the filtering setting and consists of an optimization procedure at each time step. By performing each inference optimization procedure with an iterative amortized inference model, we obtain a computationally efficient implementation of the algorithm, which we call amortized variational filtering. We present experiments demonstrating that this general-purpose method improves inference performance across several recent deep dynamical latent variable models.
Distributed Weight Consolidation: A Brain Segmentation Case Study
McClure, Patrick, Zheng, Charles Y., Kaczmarzyk, Jakub, Rogers-Lee, John, Ghosh, Satra, Nielson, Dylan, Bandettini, Peter A., Pereira, Francisco
Collecting the large datasets needed to train deep neural networks can be very difficult, particularly for the many applications for which sharing and pooling data is complicated by practical, ethical, or legal concerns. However, it may be the case that derivative datasets or predictive models developed within individual sites can be shared and combined with fewer restrictions. Training on distributed data and combining the resulting networks is often viewed as continual learning, but these methods require networks to be trained sequentially. In this paper, we introduce distributed weight consolidation (DWC), a continual learning method to consolidate the weights of separate neural networks, each trained on an independent dataset. We evaluated DWC with a brain segmentation case study, where we consolidated dilated convolutional neural networks trained on independent structural magnetic resonance imaging (sMRI) datasets from different sites. We found that DWC led to increased performance on test sets from the different sites, while maintaining generalization performance for a very large and completely independent multi-site dataset, compared to an ensemble baseline.
Importance Weighting and Variational Inference
Domke, Justin, Sheldon, Daniel R.
Recent work used importance sampling ideas for better variational bounds on likelihoods. We clarify the applicability of these ideas to pure probabilistic inference, by showing the resulting Importance Weighted Variational Inference (IWVI) technique is an instance of augmented variational inference, thus identifying the looseness in previous work. Experiments confirm IWVI's practicality for probabilistic inference. As a second contribution, we investigate inference with elliptical distributions, which improves accuracy in low dimensions, and convergence in high dimensions.
Boosting Black Box Variational Inference
Locatello, Francesco, Dresdner, Gideon, Khanna, Rajiv, Valera, Isabel, Raetsch, Gunnar
Approximating a probability density in a tractable manner is a central task in Bayesian statistics. Variational Inference (VI) is a popular technique that achieves tractability by choosing a relatively simple variational approximation. Borrowing ideas from the classic boosting framework, recent approaches attempt to \emph{boost} VI by replacing the selection of a single density with an iteratively constructed mixture of densities. In order to guarantee convergence, previous works impose stringent assumptions that require significant effort for practitioners. Specifically, they require a custom implementation of the greedy step (called the LMO) for every probabilistic model with respect to an unnatural variational family of truncated distributions. Our work fixes these issues with novel theoretical and algorithmic insights. On the theoretical side, we show that boosting VI satisfies a relaxed smoothness assumption which is sufficient for the convergence of the functional Frank-Wolfe (FW) algorithm. Furthermore, we rephrase the LMO problem and propose to maximize the Residual ELBO (RELBO) which replaces the standard ELBO optimization in VI. These theoretical enhancements allow for black box implementation of the boosting subroutine. Finally, we present a stopping criterion drawn from the duality gap in the classic FW analyses and exhaustive experiments to illustrate the usefulness of our theoretical and algorithmic contributions.
Differentially Private Bayesian Inference for Exponential Families
Bernstein, Garrett, Sheldon, Daniel R.
The study of private inference has been sparked by growing concern regarding the analysis of data when it stems from sensitive sources. We present the first method for private Bayesian inference in exponential families that properly accounts for noise introduced by the privacy mechanism. It is efficient because it works only with sufficient statistics and not individual data. Unlike other methods, it gives properly calibrated posterior beliefs in the non-asymptotic data regime.
Computationally and statistically efficient learning of causal Bayes nets using path queries
Causal discovery from empirical data is a fundamental problem in many scientific domains. Observational data allows for identifiability only up to Markov equivalence class. In this paper we first propose a polynomial time algorithm for learning the exact correctly-oriented structure of the transitive reduction of any causal Bayesian network with high probability, by using interventional path queries. Each path query takes as input an origin node and a target node, and answers whether there is a directed path from the origin to the target. This is done by intervening on the origin node and observing samples from the target node. We theoretically show the logarithmic sample complexity for the size of interventional data per path query, for continuous and discrete networks. We then show how to learn the transitive edges using also logarithmic sample complexity (albeit in time exponential in the maximum number of parents for discrete networks), which allows us to learn the full network. We further extend our work by reducing the number of interventional path queries for learning rooted trees. We also provide an analysis of imperfect interventions.
Contrastive Learning from Pairwise Measurements
Chen, Yi, Yang, Zhuoran, Xie, Yuchen, Wang, Princeton Zhaoran
Learning from pairwise measurements naturally arises from many applications, such as rank aggregation, ordinal embedding, and crowdsourcing. However, most existing models and algorithms are susceptible to potential model misspecification. In this paper, we study a semiparametric model where the pairwise measurements follow a natural exponential family distribution with an unknown base measure. Such a semiparametric model includes various popular parametric models, such as the Bradley-Terry-Luce model and the paired cardinal model, as special cases. To estimate this semiparametric model without specifying the base measure, we propose a data augmentation technique to create virtual examples, which enables us to define a contrastive estimator. In particular, we prove that such a contrastive estimator is invariant to model misspecification within the natural exponential family, and moreover, attains the optimal statistical rate of convergence up to a logarithmic factor. We provide numerical experiments to corroborate our theory.
Multi-value Rule Sets for Interpretable Classification with Feature-Efficient Representations
We present the Multi-value Rule Set (MRS) for interpretable classification with feature efficient presentations. Compared to rule sets built from single-value rules, MRS adopts a more generalized form of association rules that allows multiple values in a condition. Rules of this form are more concise than classical single-value rules in capturing and describing patterns in data. Our formulation also pursues a higher efficiency of feature utilization, which reduces possible cost in data collection and storage. We propose a Bayesian framework for formulating an MRS model and develop an efficient inference method for learning a maximum a posteriori, incorporating theoretically grounded bounds to iteratively reduce the search space and improve the search efficiency. Experiments on synthetic and real-world data demonstrate that MRS models have significantly smaller complexity and fewer features than baseline models while being competitive in predictive accuracy.