Uncertainty
Graphical model inference: Sequential Monte Carlo meets deterministic approximations
Lindsten, Fredrik, Helske, Jouni, Vihola, Matti
Approximate inference in probabilistic graphical models (PGMs) can be grouped into deterministic methods and Monte-Carlo-based methods. The former can often provide accurate and rapid inferences, but are typically associated with biases that are hard to quantify. The latter enjoy asymptotic consistency, but can suffer from high computational costs. In this paper we present a way of bridging the gap between deterministic and stochastic inference. Specifically, we suggest an efficient sequential Monte Carlo (SMC) algorithm for PGMs which can leverage the output from deterministic inference methods. While generally applicable, we show explicitly how this can be done with loopy belief propagation, expectation propagation, and Laplace approximations. The resulting algorithm can be viewed as a post-correction of the biases associated with these methods and, indeed, numerical results show clear improvements over the baseline deterministic methods as well as over "plain" SMC.
Proximal Graphical Event Models
Bhattacharjya, Debarun, Subramanian, Dharmashankar, Gao, Tian
Event datasets include events that occur irregularly over the timeline and are prevalent in numerous domains. We introduce proximal graphical event models (PGEM) as a representation of such datasets. PGEMs belong to a broader family of models that characterize relationships between various types of events, where the rate of occurrence of an event type depends only on whether or not its parents have occurred in the most recent history. The main advantage over the state of the art models is that they are entirely data driven and do not require additional inputs from the user, which can require knowledge of the domain such as choice of basis functions or hyperparameters in graphical event models. We theoretically justify our learning of optimal windows for parental history and the choices of parental sets, and the algorithm are sound and complete in terms of parent structure learning. We present additional efficient heuristics for learning PGEMs from data, demonstrating their effectiveness on synthetic and real datasets.
Approximate Knowledge Compilation by Online Collapsed Importance Sampling
Friedman, Tal, Broeck, Guy Van den
We introduce collapsed compilation, a novel approximate inference algorithm for discrete probabilistic graphical models. It is a collapsed sampling algorithm that incrementally selects which variable to sample next based on the partial compila- tion obtained so far. This online collapsing, together with knowledge compilation inference on the remaining variables, naturally exploits local structure and context- specific independence in the distribution. These properties are used implicitly in exact inference, but are difficult to harness for approximate inference. More- over, by having a partially compiled circuit available during sampling, collapsed compilation has access to a highly effective proposal distribution for importance sampling. Our experimental evaluation shows that collapsed compilation performs well on standard benchmarks. In particular, when the amount of exact inference is equally limited, collapsed compilation is competitive with the state of the art, and outperforms it on several benchmarks.
Stochastic Expectation Maximization with Variance Reduction
Chen, Jianfei, Zhu, Jun, Teh, Yee Whye, Zhang, Tong
Expectation-Maximization (EM) is a popular tool for learning latent variable models, but the vanilla batch EM does not scale to large data sets because the whole data set is needed at every E-step. Stochastic Expectation Maximization (sEM) reduces the cost of E-step by stochastic approximation. However, sEM has a slower asymptotic convergence rate than batch EM, and requires a decreasing sequence of step sizes, which is difficult to tune. In this paper, we propose a variance reduced stochastic EM (sEM-vr) algorithm inspired by variance reduced stochastic gradient descent algorithms. We show that sEM-vr has the same exponential asymptotic convergence rate as batch EM. Moreover, sEM-vr only requires a constant step size to achieve this rate, which alleviates the burden of parameter tuning. We compare sEM-vr with batch EM, sEM and other algorithms on Gaussian mixture models and probabilistic latent semantic analysis, and sEM-vr converges significantly faster than these baselines.
Rectangular Bounding Process
Fan, Xuhui, Li, Bin, SIsson, Scott
Stochastic partition models divide a multi-dimensional space into a number of rectangular regions, such that the data within each region exhibit certain types of homogeneity. Due to the nature of their partition strategy, existing partition models may create many unnecessary divisions in sparse regions when trying to describe data in dense regions. To avoid this problem we introduce a new parsimonious partition model -- the Rectangular Bounding Process (RBP) -- to efficiently partition multi-dimensional spaces, by employing a bounding strategy to enclose data points within rectangular bounding boxes. Unlike existing approaches, the RBP possesses several attractive theoretical properties that make it a powerful nonparametric partition prior on a hypercube. In particular, the RBP is self-consistent and as such can be directly extended from a finite hypercube to infinite (unbounded) space. We apply the RBP to regression trees and relational models as a flexible partition prior. The experimental results validate the merit of the RBP {in rich yet parsimonious expressiveness} compared to the state-of-the-art methods.
Simple, Distributed, and Accelerated Probabilistic Programming
Tran, Dustin, Hoffman, Matthew W., Moore, Dave, Suter, Christopher, Vasudevan, Srinivas, Radul, Alexey
We describe a simple, low-level approach for embedding probabilistic programming in a deep learning ecosystem. In particular, we distill probabilistic programming down to a single abstractionโthe random variable. Our lightweight implementation in TensorFlow enables numerous applications: a model-parallel variational auto-encoder (VAE) with 2nd-generation tensor processing units (TPUv2s); a data-parallel autoregressive model (Image Transformer) with TPUv2s; and multi-GPU No-U-Turn Sampler (NUTS). For both a state-of-the-art VAE on 64x64 ImageNet and Image Transformer on 256x256 CelebA-HQ, our approach achieves an optimal linear speedup from 1 to 256 TPUv2 chips. With NUTS, we see a 100x speedup on GPUs over Stan and 37x over PyMC3.
A Bayesian Approach to Generative Adversarial Imitation Learning
Jeon, Wonseok, Seo, Seokin, Kim, Kee-Eung
Generative adversarial training for imitation learning has shown promising results on high-dimensional and continuous control tasks. This paradigm is based on reducing the imitation learning problem to the density matching problem, where the agent iteratively refines the policy to match the empirical state-action visitation frequency of the expert demonstration. Although this approach has shown to robustly learn to imitate even with scarce demonstration, one must still address the inherent challenge that collecting trajectory samples in each iteration is a costly operation. To address this issue, we first propose a Bayesian formulation of generative adversarial imitation learning (GAIL), where the imitation policy and the cost function are represented as stochastic neural networks. Then, we show that we can significantly enhance the sample efficiency of GAIL leveraging the predictive density of the cost, on an extensive set of imitation learning tasks with high-dimensional states and actions.
Out-of-Distribution Detection using Multiple Semantic Label Representations
Shalev, Gabi, Adi, Yossi, Keshet, Joseph
Deep Neural Networks are powerful models that attained remarkable results on a variety of tasks. These models are shown to be extremely efficient when training and test data are drawn from the same distribution. However, it is not clear how a network will act when it is fed with an out-of-distribution example. In this work, we consider the problem of out-of-distribution detection in neural networks. We propose to use multiple semantic dense representations instead of sparse representation as the target label. Specifically, we propose to use several word representations obtained from different corpora or architectures as target labels. We evaluated the proposed model on computer vision, and speech commands detection tasks and compared it to previous methods. Results suggest that our method compares favorably with previous work. Besides, we present the efficiency of our approach for detecting wrongly classified and adversarial examples.
BRUNO: A Deep Recurrent Model for Exchangeable Data
Korshunova, Iryna, Degrave, Jonas, Huszar, Ferenc, Gal, Yarin, Gretton, Arthur, Dambre, Joni
We present a novel model architecture which leverages deep learning tools to perform exact Bayesian inference on sets of high dimensional, complex observations. Our model is provably exchangeable, meaning that the joint distribution over observations is invariant under permutation: this property lies at the heart of Bayesian inference. The model does not require variational approximations to train, and new samples can be generated conditional on previous samples, with cost linear in the size of the conditioning set. The advantages of our architecture are demonstrated on learning tasks that require generalisation from short observed sequences while modelling sequence variability, such as conditional image generation, few-shot learning, and anomaly detection.
Bayesian Alignments of Warped Multi-Output Gaussian Processes
Kaiser, Markus, Otte, Clemens, Runkler, Thomas, Ek, Carl Henrik
We propose a novel Bayesian approach to modelling nonlinear alignments of time series based on latent shared information. We apply the method to the real-world problem of finding common structure in the sensor data of wind turbines introduced by the underlying latent and turbulent wind field. The proposed model allows for both arbitrary alignments of the inputs and non-parametric output warpings to transform the observations. This gives rise to multiple deep Gaussian process models connected via latent generating processes. We present an efficient variational approximation based on nested variational compression and show how the model can be used to extract shared information between dependent time series, recovering an interpretable functional decomposition of the learning problem. We show results for an artificial data set and real-world data of two wind turbines.