Uncertainty
Deep Log-Likelihood Ratio Quantization
Arvinte, Marius, Tewfik, Ahmed H., Vishwanath, Sriram
In this work, a deep learning-based method for log-likelihood ratio (LLR) lossy compression and quantization is proposed, with emphasis on a single-input single-output uncorrelated fading communication setting. A deep autoencoder network is trained to compress, quantize and reconstruct the bit log-likelihood ratios corresponding to a single transmitted symbol. Specifically, the encoder maps to a latent space with dimension equal to the number of sufficient statistics required to recover the inputs - equal to three in this case - while the decoder aims to reconstruct a noisy version of the latent representation with the purpose of modeling quantization effects in a differentiable way. Simulation results show that, when applied to a standard rate-1/2 low-density parity-check (LDPC) code, a finite precision compression factor of nearly three times is achieved when storing an entire codeword, with an incurred loss of performance lower than 0.1 dB compared to straightforward scalar quantization of the log-likelihood ratios.
Embarrassingly parallel MCMC using deep invertible transformations
Mesquita, Diego, Blomstedt, Paul, Kaski, Samuel
While MCMC methods have become a main work-horse for Bayesian inference, scaling them to large distributed datasets is still a challenge. Embarrassingly parallel MCMC strategies take a divide-and-conquer stance to achieve this by writing the target posterior as a product of subposteriors, running MCMC for each of them in parallel and subsequently combining the results. The challenge then lies in devising efficient aggregation strategies. Current strategies trade-off between approximation quality, and costs of communication and computation. In this work, we introduce a novel method that addresses these issues simultaneously. Our key insight is to introduce a deep invertible transformation to approximate each of the subposteriors. These approximations can be made accurate even for complex distributions and serve as intermediate representations, keeping the total communication cost limited. Moreover, they enable us to sample from the product of the subposteriors using an efficient and stable importance sampling scheme. We demonstrate the approach outperforms available state-of-the-art methods in a range of challenging scenarios, including high-dimensional and heterogeneous subposteriors.
Revisiting clustering as matrix factorisation on the Stiefel manifold
Chrรฉtien, Stรฉphane, Guedj, Benjamin
Our approach leverages the well known Burer-Monteiro factorisation strategy from large scale optimisation, in the context of low rank estimation. Moreover, our Burer-Monteiro factors are shown to lie on a Stiefel manifold. We propose a new generalized Bayesian estimator for this problem and prove novel prediction bounds for clustering. We also devise a componentwise Langevin sampler on the Stiefel manifold to compute this estimator.
Sparse Grouped Gaussian Processes for Solar Power Forecasting
Dahl, Astrid, Bonilla, Edwin V.
We consider multi-task regression models where observations are assumed to be a linear combination of several latent node and weight functions, all drawn from Gaussian process priors that allow nonzero covariance between grouped latent functions. Motivated by the problem of developing scalable methods for distributed solar forecasting, we exploit sparse covariance structures where latent functions are assumed to be conditionally independent given a group-pivot latent function. We exploit properties of multivariate Gaussians to construct sparse Cholesky factors directly, rather than obtaining them through iterative routines, and by doing so achieve significantly improved time and memory complexity including prediction complexity that is linear in the number of grouped functions. We test our approach on large multi-task datasets and find that sparse specifications achieve the same or better accuracy than non-sparse counterparts in less time, and improve on benchmark model accuracy.
Likelihood-free MCMC with Approximate Likelihood Ratios
Hermans, Joeri, Begy, Volodimir, Louppe, Gilles
We propose a novel approach for posterior sampling with intractable likelihoods. This is an increasingly important problem in scientific applications where models are implemented as sophisticated computer simulations. As a result, tractable densities are not available, which forces practitioners to rely on approximations during inference. We address the intractability of densities by training a parameterized classifier whose output is used to approximate likelihood ratios between arbitrary model parameters. In turn, we are able to draw posterior samples by plugging this approximator into common Markov chain Monte Carlo samplers such as Metropolis-Hastings and Hamiltonian Monte Carlo. We demonstrate the proposed technique by fitting the generating parameters of implicit models, ranging from a linear probabilistic model to settings in high energy physics with high-dimensional observations. Finally, we discuss several diagnostics to assess the quality of the posterior.
Rectangular Bounding Process
Fan, Xuhui, Li, Bin, Sisson, Scott Anthony
Stochastic partition models divide a multi-dimensional space into a number of rectangular regions, such that the data within each region exhibit certain types of homogeneity. Due to the nature of their partition strategy, existing partition models may create many unnecessary divisions in sparse regions when trying to describe data in dense regions. To avoid this problem we introduce a new parsimonious partition model -- the Rectangular Bounding Process (RBP) -- to efficiently partition multi-dimensional spaces, by employing a bounding strategy to enclose data points within rectangular bounding boxes. Unlike existing approaches, the RBP possesses several attractive theoretical properties that make it a powerful nonparametric partition prior on a hypercube. In particular, the RBP is self-consistent and as such can be directly extended from a finite hypercube to infinite (unbounded) space. We apply the RBP to regression trees and relational models as a flexible partition prior. The experimental results validate the merit of the RBP {in rich yet parsimonious expressiveness} compared to the state-of-the-art methods.
An Introduction to Bayesian Reasoning
The coefficients are constrained by the prior and end up smaller in the second example. Although the model is not fit here with Bayesian techniques, it has a Bayesian interpretation. The output here does not quite give a distribution over the coefficient (though other packages can), but does give something related: a 95% confidence interval around the coefficient, in addition to its point estimate. By now you may have a taste for Bayesian techniques and what they can do for you, from a few simple examples. Things get more interesting, however, when we see what priors and posteriors can do for a real-world use case. For part 2, please click here.
Stay Ahead of Poachers: Illegal Wildlife Poaching Prediction and Patrol Planning Under Uncertainty with Field Test Evaluations
Gholami, Shahrzad, Xu, Lily, Carthy, Sara Mc, Dilkina, Bistra, Plumptre, Andrew, Tambe, Milind, Singh, Rohit, Nsubuga, Mustapha, Mabonga, Joshua, Driciru, Margaret, Wanyama, Fred, Rwetsiba, Aggrey, Okello, Tom, Enyel, Eric
Illegal wildlife poaching threatens ecosystems and drives endangered species toward extinction. However, efforts for wildlife monitoring and protection in conservation areas are constrained by the limited resources of law enforcement agencies. To aid in wildlife protection, PAWS is an ML pipeline that has been developed as an end-to-end, data-driven approach to combat illegal poaching. PAWS assists park managers by identifying areas at high risk of poaching throughout protected areas based on real-world data and generating optimal patrol routes for deployment in the field. In this paper, we address significant challenges including extreme class imbalance (up to 1:200), bias, and uncertainty in wildlife poaching data to enhance PAWS and apply its methodology to several national parks with diverse characteristics. (i) We use Gaussian processes to quantify predictive uncertainty, which we exploit to increase the robustness of our prescribed patrols. We evaluate our approach on real-world historic poaching data from Murchison Falls and Queen Elizabeth National Parks in Uganda and, for the first time, Srepok Wildlife Sanctuary in Cambodia. (ii) We present the results of large-scale field tests conducted in Murchison Falls and Srepok Wildlife Sanctuary which confirm that the predictive power of PAWS extends promisingly to multiple parks. This paper is part of an effort to expand PAWS to 600 parks around the world through integration with SMART conservation software.
Learning Quantum Graphical Models using Constrained Gradient Descent on the Stiefel Manifold
Adhikary, Sandesh, Srinivasan, Siddarth, Boots, Byron
Quantum graphical models (QGMs) extend the classical framework for reasoning about uncertainty by incorporating the quantum mechanical view of probability. Prior work on QGMs has focused on hidden quantum Markov models (HQMMs), which can be formulated using quantum analogues of the sum rule and Bayes rule used in classical graphical models. Despite the focus on developing the QGM framework, there has been little progress in learning these models from data. The existing state-of-the-art approach randomly initializes parameters and iteratively finds unitary transformations that increase the likelihood of the data. While this algorithm demonstrated theoretical strengths of HQMMs over HMMs, it is slow and can only handle a small number of hidden states. In this paper, we tackle the learning problem by solving a constrained optimization problem on the Stiefel manifold using a well-known retraction-based algorithm. We demonstrate that this approach is not only faster and yields better solutions on several datasets, but also scales to larger models that were prohibitively slow to train via the earlier method.
NeuTra-lizing Bad Geometry in Hamiltonian Monte Carlo Using Neural Transport
Hoffman, Matthew, Sountsov, Pavel, Dillon, Joshua V., Langmore, Ian, Tran, Dustin, Vasudevan, Srinivas
Hamiltonian Monte Carlo is a powerful algorithm for sampling from difficult-to-normalize posterior distributions. However, when the geometry of the posterior is unfavorable, it may take many expensive evaluations of the target distribution and its gradient to converge and mix. We propose neural transport (NeuTra) HMC, a technique for learning to correct this sort of unfavorable geometry using inverse autoregressive flows (IAF), a powerful neural variational inference technique. The IAF is trained to minimize the KL divergence from an isotropic Gaussian to the warped posterior, and then HMC sampling is performed in the warped space. We evaluate NeuTra HMC on a variety of synthetic and real problems, and find that it significantly outperforms vanilla HMC both in time to reach the stationary distribution and asymptotic effective-sample-size rates.