We describe a method for Bayesian optimization by which one may incorporate data from multiple systems whose quantitative interrelationships are unknown a priori. All general (nonreal-valued) features of the systems are associated with continuous latent variables that enter as inputs into a single metamodel that simultaneously learns the response surfaces of all of the systems. Bayesian inference is used to determine appropriate beliefs regarding the latent variables. We explain how the resulting probabilistic metamodel may be used for Bayesian optimization tasks and demonstrate its implementation on a variety of synthetic and real-world examples, comparing its performance under zero-, one-, and few-shot settings against traditional Bayesian optimization, which usually requires substantially more data from the system of interest.

We consider the problem of structure learning for Gaifman models and learn relational features that can be used to derive feature representations from a knowledge base. These relational features are first-order rules that are then partially grounded and counted over local neighborhoods of a Gaifman model to obtain the feature representations. We propose a method for learning these relational features for a Gaifman model by using relational tree distances. Our empirical evaluation on real data sets demonstrates the superiority of our approach over classical rule-learning.

Let's get the basic definition out of the way: Markov Chain Monte Carlo (MCMC) methods let us compute samples from a distribution even though we can't compute it. Let's back up and talk about Monte Carlo Sampling. What are Monte Carlo methods? "Monte Carlo methods, or Monte Carlo experiments, are a broad class of computational algorithms that rely on repeated random sampling to obtain numerical results." And you are tasked with determining the area enclosed by this shape.

January 3, 2020 Abstract Mining graph data has become a popular research topic in computer science and has been widely studied in both academia and industry given the increasing amount of network data in the recent years. However, the huge amount of network data has posed great challenges for efficient analysis. The investigation on efficient representation of a graph has profound theoretical significance and important realistic meaning, we therefore introduce some basic ideas in graph representation/network embedding as well as some representative models in this chapter. Keywords: Deep Learning, Graph Representation, Network Embedding 1 Introduction Many real-world systems, such as Facebook/Twitter social systems, DBLP author-citation systems and roadmap transportation systems etc., can be formulated in the form of graphs or networks, making analyzing these systems equivalent to mining their corresponding graphs or networks. Literature on mining graphs or networks has two names: ...

Flow-based generative models parameterize probability distributions through an invertible transformation and can be trained by maximum likelihood. Invertible residual networks provide a flexible family of transformations where only Lipschitz conditions rather than strict architectural constraints are needed for enforcing invertibility. However, prior work trained invertible residual networks for density estimation by relying on biased log-density estimates whose bias increased with the network's expressiveness. We give a tractable unbiased estimate of the log density using a "Russian roulette" estimator, and reduce the memory required during training by using an alternative infinite series for the gradient. Furthermore, we improve invertible residual blocks by proposing the use of activation functions that avoid derivative saturation and generalizing the Lipschitz condition to induced mixed norms. The resulting approach, called Residual Flows, achieves state-of-theart performance on density estimation amongst flow-based models, and outperforms networks that use coupling blocks at joint generative and discriminative modeling.

Learning in Gaussian Process models occurs through the adaptation of hyperparameters of the mean and the covariance function. The classical approach entails maximizing the marginal likelihood yielding fixed point estimates (an approach called \textit{Type II maximum likelihood} or ML-II). An alternative learning procedure is to infer the posterior over hyperparameters in a hierarchical specification of GPs we call \textit{Fully Bayesian Gaussian Process Regression} (GPR). This work considers two approximation schemes for the intractable hyperparameter posterior: 1) Hamiltonian Monte Carlo (HMC) yielding a sampling-based approximation and 2) Variational Inference (VI) where the posterior over hyperparameters is approximated by a factorized Gaussian (mean-field) or a full-rank Gaussian accounting for correlations between hyperparameters. We analyze the predictive performance for fully Bayesian GPR on a range of benchmark data sets.

Robustness to out-of-distribution (OOD) data is an important goal in building reliable machine learning systems. Especially in autonomous systems, wrong predictions for OOD inputs can cause safety critical situations. As a first step towards a solution, we consider the problem of detecting such data in a value-based deep reinforcement learning (RL) setting. Modelling this problem as a one-class classification problem, we propose a framework for uncertainty-based OOD classification: UBOOD. It is based on the effect that an agent's epistemic uncertainty is reduced for situations encountered during training (in-distribution), and thus lower than for unencountered (OOD) situations. Being agnostic towards the approach used for estimating epistemic uncertainty, combinations with different uncertainty estimation methods, e.g. approximate Bayesian inference methods or ensembling techniques are possible. We further present a first viable solution for calculating a dynamic classification threshold, based on the uncertainty distribution of the training data. Evaluation shows that the framework produces reliable classification results when combined with ensemble-based estimators, while the combination with concrete dropout-based estimators fails to reliably detect OOD situations. In summary, UBOOD presents a viable approach for OOD classification in deep RL settings by leveraging the epistemic uncertainty of the agent's value function.

Sequence generation models are commonly refined with reinforcement learning over user-defined metrics. However, high gradient variance hinders the practical use of this method. To stabilize this method, we adapt to contextual generation of categorical sequences a policy gradient estimator, which evaluates a set of correlated Monte Carlo (MC) rollouts for variance control. Due to the correlation, the number of unique rollouts is random and adaptive to model uncertainty; those rollouts naturally become baselines for each other, and hence are combined to effectively reduce gradient variance. We also demonstrate the use of correlated MC rollouts for binary-tree softmax models, which reduce the high generation cost in large vocabulary scenarios by decomposing each categorical action into a sequence of binary actions. We evaluate our methods on both neural program synthesis and image captioning. The proposed methods yield lower gradient variance and consistent improvement over related baselines.

Normalizing flows transform a latent distribution through an invertible neural network for a flexible and pleasingly simple approach to generative modelling, while preserving an exact likelihood. We propose FlowGMM, an end-to-end approach to generative semi supervised learning with normalizing flows, using a latent Gaussian mixture model. FlowGMM is distinct in its simplicity, unified treatment of labelled and unlabelled data with an exact likelihood, interpretability, and broad applicability beyond image data. We show promising results on a wide range of applications, including AG-News and Yahoo Answers text data, tabular data, and semi-supervised image classification. We also show that FlowGMM can discover interpretable structure, provide real-time optimization-free feature visualizations, and specify well calibrated predictive distributions.

Data-based discovery of effective, coarse-grained (CG) models of high-dimensional dynamical systems presents a unique challenge in computational physics and particularly in the context of multiscale problems. The present paper offers a data-based, probablistic perspective that enables the quantification of predictive uncertainties. One of the outstanding problems has been the introduction of physical constraints in the probabilistic machine learning objectives. The primary utility of such constraints stems from the undisputed physical laws such as conservation of mass, energy etc that they represent. Furthermore and apart from leading to physically realistic predictions, they can significantly reduce the requisite amount of training data which for high-dimensional, multiscale systems are expensive to obtain (Small Data regime). We formulate the coarse-graining process by employing a probabilistic state-space model and account for the aforementioned equality constraints as virtual observables in the associated densities. We demonstrate how probabilistic inference tools can be employed to identify the coarse-grained variables in combination with deep neural nets and their evolution model without ever needing to define a fine-to-coarse (restriction) projection and without needing time-derivatives of state variables. The formulation adopted enables the quantification of a crucial, and often neglected, component in the CG process, i.e. the predictive uncertainty due to information loss. Furthermore, it is capable of reconstructing the evolution of the full, fine-scale system and therefore the observables of interest need not be selected a priori. We demonstrate the efficacy of the proposed framework by applying it to systems of interacting particles and an image series of a nonlinear pendulum. In both cases we identify the underlying coarse dynamics and can generate extrap-olative predicitions including the forming and propagation of a shock for the particle systems and a stable trajectory in the phase space for the pendulum. Keywords: Bayesian machine learning, virtual observables, multiscale modeling, reduced order modeling, coarse graining1. Introduction High-dimensional, nonlinear dynamical systems are ubiquitous in applied physics and engineering. The computational resources needed for their solution can grow exponentially with the dimension of the state-space as well as with the smallest timescale that needs to be resolved as this determines the discretization time-step.