Uncertainty
Finite-Dimensional BFRY Priors and Variational Bayesian Inference for Power Law Models
Lee, Juho, James, Lancelot F., Choi, Seungjin
Bayesian nonparametric methods based on the Dirichlet process (DP), gamma process and beta process, have proven effective in capturing aspects of various datasets arising in machine learning. However, it is now recognized that such processes have their limitations in terms of the ability to capture power law behavior. As such there is now considerable interest in models based on the Stable Processs (SP), Generalized Gamma process (GGP) and Stable-beta process (SBP). In analogy to tractable processes such as the finite-dimensional Dirichlet process, we describe a class of random processes, we call iid finite-dimensional BFRY processes, that enables one to begin to develop efficient posterior inference algorithms such as variational Bayes that readily scale to massive datasets. For illustrative purposes, we describe a simple variational Bayes algorithm for normalized SP mixture models, and demonstrate its usefulness with experiments on synthetic and real-world datasets. Papers published at the Neural Information Processing Systems Conference.
Bayesian Inference of Individualized Treatment Effects using Multi-task Gaussian Processes
Alaa, Ahmed M., Schaar, Mihaela van der
Predicated on the increasing abundance of electronic health records, we investigate the problem of inferring individualized treatment effects using observational data. Stemming from the potential outcomes model, we propose a novel multi-task learning framework in which factual and counterfactual outcomes are modeled as the outputs of a function in a vector-valued reproducing kernel Hilbert space (vvRKHS). We develop a nonparametric Bayesian method for learning the treatment effects using a multi-task Gaussian process (GP) with a linear coregionalization kernel as a prior over the vvRKHS. The Bayesian approach allows us to compute individualized measures of confidence in our estimates via pointwise credible intervals, which are crucial for realizing the full potential of precision medicine. The impact of selection bias is alleviated via a risk-based empirical Bayes method for adapting the multi-task GP prior, which jointly minimizes the empirical error in factual outcomes and the uncertainty in (unobserved) counterfactual outcomes.
New Liftable Classes for First-Order Probabilistic Inference
Kazemi, Seyed Mehran, Kimmig, Angelika, Broeck, Guy Van den, Poole, David
Statistical relational models provide compact encodings of probabilistic dependencies in relational domains, but result in highly intractable graphical models. The goal of lifted inference is to carry out probabilistic inference without needing to reason about each individual separately, by instead treating exchangeable, undistinguished objects as a whole. In this paper, we study the domain recursion inference rule, which, despite its central role in early theoretical results on domain-lifted inference, has later been believed redundant. We show that this rule is more powerful than expected, and in fact significantly extends the range of models for which lifted inference runs in time polynomial in the number of individuals in the domain. This includes an open problem called S4, the symmetric transitivity model, and a first-order logic encoding of the birthday paradox.
Learning Infinite RBMs with Frank-Wolfe
Ping, Wei, Liu, Qiang, Ihler, Alexander T.
In this work, we propose an infinite restricted Boltzmann machine (RBM), whose maximum likelihood estimation (MLE) corresponds to a constrained convex optimization. We consider the Frank-Wolfe algorithm to solve the program, which provides a sparse solution that can be interpreted as inserting a hidden unit at each iteration, so that the optimization process takes the form of a sequence of finite models of increasing complexity. As a side benefit, this can be used to easily and efficiently identify an appropriate number of hidden units during the optimization. The resulting model can also be used as an initialization for typical state-of-the-art RBM training algorithms such as contrastive divergence, leading to models with consistently higher test likelihood than random initialization. Papers published at the Neural Information Processing Systems Conference.
Asynchronous Anytime Sequential Monte Carlo
Paige, Brooks, Wood, Frank, Doucet, Arnaud, Teh, Yee Whye
We introduce a new sequential Monte Carlo algorithm we call the particle cascade. The particle cascade is an asynchronous, anytime alternative to traditional sequential Monte Carlo algorithms that is amenable to parallel and distributed implementations. It uses no barrier synchronizations which leads to improved particle throughput and memory efficiency. It is an anytime algorithm in the sense that it can be run forever to emit an unbounded number of particles while keeping within a fixed memory budget. We prove that the particle cascade provides an unbiased marginal likelihood estimator which can be straightforwardly plugged into existing pseudo-marginal methods.
Learning Time-Varying Coverage Functions
Du, Nan, Liang, Yingyu, Balcan, Maria-Florina F., Song, Le
Coverage functions are an important class of discrete functions that capture laws of diminishing returns. In this paper, we propose a new problem of learning time-varying coverage functions which arise naturally from applications in social network analysis, machine learning, and algorithmic game theory. We develop a novel parametrization of the time-varying coverage function by illustrating the connections with counting processes. We present an efficient algorithm to learn the parameters by maximum likelihood estimation, and provide a rigorous theoretic analysis of its sample complexity. Empirical experiments from information diffusion in social network analysis demonstrate that with few assumptions about the underlying diffusion process, our method performs significantly better than existing approaches on both synthetic and real world data.
Scaling the Poisson GLM to massive neural datasets through polynomial approximations
Zoltowski, David, Pillow, Jonathan W.
Recent advances in recording technologies have allowed neuroscientists to record simultaneous spiking activity from hundreds to thousands of neurons in multiple brain regions. Such large-scale recordings pose a major challenge to existing statistical methods for neural data analysis. Here we develop highly scalable approximate inference methods for Poisson generalized linear models (GLMs) that require only a single pass over the data. Our approach relies on a recently proposed method for obtaining approximate sufficient statistics for GLMs using polynomial approximations [Huggins et al., 2017], which we adapt to the Poisson GLM setting. We focus on inference using quadratic approximations to nonlinear terms in the Poisson GLM log-likelihood with Gaussian priors, for which we derive closed-form solutions to the approximate maximum likelihood and MAP estimates, posterior distribution, and marginal likelihood.
Basis refinement strategies for linear value function approximation in MDPs
Comanici, Gheorghe, Precup, Doina, Panangaden, Prakash
We provide a theoretical framework for analyzing basis function construction for linear value function approximation in Markov Decision Processes (MDPs). We show that important existing methods, such as Krylov bases and Bellman-error-based methods are a special case of the general framework we develop. We provide a general algorithmic framework for computing basis function refinements which "respect" the dynamics of the environment, and we derive approximation error bounds that apply for any algorithm respecting this general framework. We also show how, using ideas related to bisimulation metrics, one can translate basis refinement into a process of finding "prototypes" that are diverse enough to represent the given MDP. Papers published at the Neural Information Processing Systems Conference.
Softstar: Heuristic-Guided Probabilistic Inference
Monfort, Mathew, Lake, Brenden M., Lake, Brenden M., Ziebart, Brian, Lucey, Patrick, Tenenbaum, Josh
This higher-level abstraction improves generalization in different prediction settings, but computing predictions often becomes intractable in large decision spaces. We propose the Softstar algorithm, a softened heuristic-guided search technique for the maximum entropy inverse optimal control model of sequential behavior. This approach supports probabilistic search with bounded approximation error at a significantly reduced computational cost when compared to sampling based methods. We present the algorithm, analyze approximation guarantees, and compare performance with simulation-based inference on two distinct complex decision tasks. Papers published at the Neural Information Processing Systems Conference.
A Probabilistic Model of Social Decision Making based on Reward Maximization
Khalvati, Koosha, Park, Seongmin A., Dreher, Jean-Claude, Rao, Rajesh PN
A fundamental problem in cognitive neuroscience is how humans make decisions, act, and behave in relation to other humans. Here we adopt the hypothesis that when we are in an interactive social setting, our brains perform Bayesian inference of the intentions and cooperativeness of others using probabilistic representations. We employ the framework of partially observable Markov decision processes (POMDPs) to model human decision making in a social context, focusing specifically on the volunteer's dilemma in a version of the classic Public Goods Game. We show that the POMDP model explains both the behavior of subjects as well as neural activity recorded using fMRI during the game. The decisions of subjects can be modeled across all trials using two interpretable parameters.