Uncertainty
Bayesian inference for low rank spatiotemporal neural receptive fields
Park, Mijung, Pillow, Jonathan W.
The receptive field (RF) of a sensory neuron describes how the neuron integrates sensory stimuli over time and space. In typical experiments with naturalistic or flickering spatiotemporal stimuli, RFs are very high-dimensional, due to the large number of coefficients needed to specify an integration profile across time and space. Estimating these coefficients from small amounts of data poses a variety of challenging statistical and computational problems. Here we address these challenges by developing Bayesian reduced rank regression methods for RF estimation. This corresponds to modeling the RF as a sum of several space-time separable (i.e., rank-1) filters, which proves accurate even for neurons with strongly oriented space-time RFs.
A Learning Error Analysis for Structured Prediction with Approximate Inference
Wu, Yuanbin, Lan, Man, Sun, Shiliang, Zhang, Qi, Huang, Xuanjing
In this work, we try to understand the differences between exact and approximate inference algorithms in structured prediction. We compare the estimation and approximation error of both underestimate and overestimate models. The result shows that, from the perspective of learning errors, performances of approximate inference could be as good as exact inference. The error analyses also suggest a new margin for existing learning algorithms. Empirical evaluations on text classification, sequential labelling and dependency parsing witness the success of approximate inference and the benefit of the proposed margin.
Symbolic Opportunistic Policy Iteration for Factored-Action MDPs
Raghavan, Aswin, Khardon, Roni, Fern, Alan, Tadepalli, Prasad
We address the scalability of symbolic planning under uncertainty with factored states and actions. Prior work has focused almost exclusively on factored states but not factored actions, and on value iteration (VI) compared to policy iteration (PI). Our first contribution is a novel method for symbolic policy backups via the application of constraints, which is used to yield a new efficient symbolic imple- mentation of modified PI (MPI) for factored action spaces. While this approach improves scalability in some cases, naive handling of policy constraints comes with its own scalability issues. This leads to our second and main contribution, symbolic Opportunistic Policy Iteration (OPI), which is a novel convergent al- gorithm lying between VI and MPI.
A* Lasso for Learning a Sparse Bayesian Network Structure for Continuous Variables
We address the problem of learning a sparse Bayesian network structure for continuous variables in a high-dimensional space. The constraint that the estimated Bayesian network structure must be a directed acyclic graph (DAG) makes the problem challenging because of the huge search space of network structures. Most previous methods were based on a two-stage approach that prunes the search space in the first stage and then searches for a network structure that satisfies the DAG constraint in the second stage. Although this approach is effective in a low-dimensional setting, it is difficult to ensure that the correct network structure is not pruned in the first stage in a high-dimensional setting. In this paper, we propose a single-stage method, called A* lasso, that recovers the optimal sparse Bayesian network structure by solving a single optimization problem with A* search algorithm that uses lasso in its scoring system.
DESPOT: Online POMDP Planning with Regularization
Somani, Adhiraj, Ye, Nan, Hsu, David, Lee, Wee Sun
POMDPs provide a principled framework for planning under uncertainty, but are computationally intractable, due to the "curse of dimensionality" and the "curse of history". This paper presents an online lookahead search algorithm that alleviates these difficulties by limiting the search to a set of sampled scenarios. The execution of all policies on the sampled scenarios is summarized using a Determinized Sparse Partially Observable Tree (DESPOT), which is a sparsely sampled belief tree. Our algorithm, named Regularized DESPOT (R-DESPOT), searches the DESPOT for a policy that optimally balances the size of the policy and the accuracy on its value estimate obtained through sampling. We give an output-sensitive performance bound for all policies derived from the DESPOT, and show that R-DESPOT works well if a small optimal policy exists.
Hierarchical Implicit Models and Likelihood-Free Variational Inference
Tran, Dustin, Ranganath, Rajesh, Blei, David
Implicit probabilistic models are a flexible class of models defined by a simulation process for data. They form the basis for models which encompass our understanding of the physical word. Despite this fundamental nature, the use of implicit models remains limited due to challenge in positing complex latent structure in them, and the ability to inference in such models with large data sets. In this paper, we first introduce the hierarchical implicit models (HIMs). HIMs combine the idea of implicit densities with hierarchical Bayesian modeling thereby defining models via simulators of data with rich hidden structure.
EDML for Learning Parameters in Directed and Undirected Graphical Models
Refaat, Khaled S., Choi, Arthur, Darwiche, Adnan
EDML is a recently proposed algorithm for learning parameters in Bayesian networks. It was originally derived in terms of approximate inference on a meta-network, which underlies the Bayesian approach to parameter estimation. While this initial derivation helped discover EDML in the first place and provided a concrete context for identifying some of its properties (e.g., in contrast to EM), the formal setting was somewhat tedious in the number of concepts it drew on. In this paper, we propose a greatly simplified perspective on EDML, which casts it as a general approach to continuous optimization. The new perspective has several advantages.
Global Solver and Its Efficient Approximation for Variational Bayesian Low-rank Subspace Clustering
Nakajima, Shinichi, Takeda, Akiko, Babacan, S. Derin, Sugiyama, Masashi, Takeuchi, Ichiro
When a probabilistic model and its prior are given, Bayesian learning offers inference with automatic parameter tuning. However, Bayesian learning is often obstructed by computational difficulty: the rigorous Bayesian learning is intractable in many models, and its variational Bayesian (VB) approximation is prone to suffer from local minima. In this paper, we overcome this difficulty for low-rank subspace clustering (LRSC) by providing an exact global solver and its efficient approximation. LRSC extracts a low-dimensional structure of data by embedding samples into the union of low-dimensional subspaces, and its variational Bayesian variant has shown good performance. We first prove a key property that the VB-LRSC model is highly redundant.
Approximate Inference in Continuous Determinantal Processes
Affandi, Raja Hafiz, Fox, Emily, Taskar, Ben
Determinantal point processes (DPPs) are random point processes well-suited for modeling repulsion. In machine learning, the focus of DPP-based models has been on diverse subset selection from a discrete and finite base set. This discrete setting admits an efficient algorithm for sampling based on the eigendecomposition of the defining kernel matrix. Recently, there has been growing interest in using DPPs defined on continuous spaces. While the discrete-DPP sampler extends formally to the continuous case, computationally, the steps required cannot be directly extended except in a few restricted cases.
A Bayesian method for reducing bias in neural representational similarity analysis
Cai, Mingbo, Schuck, Nicolas W., Pillow, Jonathan W., Niv, Yael
In neuroscience, the similarity matrix of neural activity patterns in response to different sensory stimuli or under different cognitive states reflects the structure of neural representational space. Existing methods derive point estimations of neural activity patterns from noisy neural imaging data, and the similarity is calculated from these point estimations. We show that this approach translates structured noise from estimated patterns into spurious bias structure in the resulting similarity matrix, which is especially severe when signal-to-noise ratio is low and experimental conditions cannot be fully randomized in a cognitive task. We propose an alternative Bayesian framework for computing representational similarity in which we treat the covariance structure of neural activity patterns as a hyper-parameter in a generative model of the neural data, and directly estimate this covariance structure from imaging data while marginalizing over the unknown activity patterns. Converting the estimated covariance structure into a correlation matrix offers a much less biased estimate of neural representational similarity.