Uncertainty
A Bayesian Framework for Figure-Ground Interpretation
Froyen, Vicky, Feldman, Jacob, Singh, Manish
Figure/ground assignment, in which the visual image is divided into nearer (figural) and farther (ground) surfaces, is an essential step in visual processing, but its underlying computational mechanisms are poorly understood. Figural assignment (often referred to as border ownership) can vary along a contour, suggesting a spatially distributed process whereby local and global cues are combined to yield local estimates of border ownership. In this paper we model figure/ground estimation in a Bayesian belief network, attempting to capture the propagation of border ownership across the image as local cues (contour curvature and T-junctions) interact with more global cues to yield a figure/ground assignment. Our network includes as a nonlocal factor skeletal (medial axis) structure, under the hypothesis that medial structure draws'' border ownership so that borders are owned by their interiors. We also briefly present a psychophysical experiment in which we measured local border ownership along a contour at various distances from an inducing cue (a T-junction).
Extended Bayesian Information Criteria for Gaussian Graphical Models
Gaussian graphical models with sparsity in the inverse covariance matrix are of significant interest in many modern applications. For the problem of recovering the graphical structure, information criteria provide useful optimization objectives for algorithms searching through sets of graphs or for selection of tuning parameters of other methods such as the graphical lasso, which is a likelihood penalization technique. In this paper we establish the asymptotic consistency of an extended Bayesian information criterion for Gaussian graphical models in a scenario where both the number of variables p and the sample size n grow. Compared to earlier work on the regression case, our treatment allows for growth in the number of non-zero parameters in the true model, which is necessary in order to cover connected graphs. We demonstrate the performance of this criterion on simulated data when used in conjuction with the graphical lasso, and verify that the criterion indeed performs better than either cross-validation or the ordinary Bayesian information criterion when p and the number of non-zero parameters q both scale with n.
Copula Bayesian Networks
We present the Copula Bayesian Network model for representing multivariate continuous distributions. Our approach builds on a novel copula-based parameterization of a conditional density that, joined with a graph that encodes independencies, offers great flexibility in modeling high-dimensional densities, while maintaining control over the form of the univariate marginals. We demonstrate the advantage of our framework for generalization over standard Bayesian networks as well as tree structured copula models for varied real-life domains that are of substantially higher dimension than those typically considered in the copula literature. Papers published at the Neural Information Processing Systems Conference.
Mixture of time-warped trajectory models for movement decoding
Corbett, Elaine, Perreault, Eric, Koerding, Konrad
Applications of Brain-Machine-Interfaces typically estimate user intent based on biological signals that are under voluntary control. For example, we might want to estimate how a patient with a paralyzed arm wants to move based on residual muscle activity. To solve such problems it is necessary to integrate obtained information over time. To do so, state of the art approaches typically use a probabilistic model of how the state, e.g. We wanted to further develop this approach using two intuitive insights: (1) At any given point of time there may be a small set of likely movement targets, potentially identified by the location of objects in the workspace or by gaze information from the user.
Computing Marginal Distributions over Continuous Markov Networks for Statistical Relational Learning
Broecheler, Matthias, Getoor, Lise
Continuous Markov random fields are a general formalism to model joint probability distributions over events with continuous outcomes. We prove that marginal computation for constrained continuous MRFs is #P-hard in general and present a polynomial-time approximation scheme under mild assumptions on the structure of the random field. Moreover, we introduce a sampling algorithm to compute marginal distributions and develop novel techniques to increase its efficiency. Continuous MRFs are a general purpose probabilistic modeling tool and we demonstrate how they can be applied to statistical relational learning. On the problem of collective classification, we evaluate our algorithm and show that the standard deviation of marginals serves as a useful measure of confidence.
A Bayesian Approach to Concept Drift
To cope with concept drift, we placed a probability distribution over the location of the most-recent drift point. We used Bayesian model comparison to update this distribution from the predictions of models trained on blocks of consecutive observations and pruned potential drift points with low probability. We compare our approach to a non-probabilistic method for drift and a probabilistic method for change-point detection. In our experiments, our approach generally yielded improved accuracy and/or speed over these other methods. Papers published at the Neural Information Processing Systems Conference.
Global seismic monitoring as probabilistic inference
Arora, Nimar, Russell, Stuart J., Kidwell, Paul, Sudderth, Erik B.
The International Monitoring System (IMS) is a global network of sensors whose purpose is to identify potential violations of the Comprehensive Nuclear-Test-Ban Treaty (CTBT), primarily through detection and localization of seismic events. We report on the first stage of a project to improve on the current automated software system with a Bayesian inference system that computes the most likely global event history given the record of local sensor data. The new system, VISA (Vertically Integrated Seismological Analysis), is based on empirically calibrated, generative models of event occurrence, signal propagation, and signal detection. VISA exhibits significantly improved precision and recall compared to the current operational system and is able to detect events that are missed even by the human analysts who post-process the IMS output. Papers published at the Neural Information Processing Systems Conference.
Fast Bayesian Inference for Non-Conjugate Gaussian Process Regression
Khan, Emtiyaz, Mohamed, Shakir, Murphy, Kevin P.
We present a new variational inference algorithm for Gaussian processes with non-conjugate likelihood functions. This includes binary and multi-class classification, as well as ordinal regression. Our method constructs a convex lower bound, which can be optimized by using an efficient fixed point update method. We then show empirically that our new approach is much faster than existing methods without any degradation in performance. Papers published at the Neural Information Processing Systems Conference.
Complex Inference in Neural Circuits with Probabilistic Population Codes and Topic Models
Beck, Jeff, Pouget, Alexandre, Heller, Katherine A.
Recent experiments have demonstrated that humans and animals typically reason probabilistically about their environment. This ability requires a neural code that represents probability distributions and neural circuits that are capable of implementing the operations of probabilistic inference. The proposed probabilistic population coding (PPC) framework provides a statistically efficient neural representation of probability distributions that is both broadly consistent with physiological measurements and capable of implementing some of the basic operations of probabilistic inference in a biologically plausible way. However, these experiments and the corresponding neural models have largely focused on simple (tractable) probabilistic computations such as cue combination, coordinate transformations, and decision making. As a result it remains unclear how to generalize this framework to more complex probabilistic computations.
Probabilistic Low-Rank Subspace Clustering
Babacan, S. D., Nakajima, Shinichi, Do, Minh
In this paper, we consider the problem of clustering data points into low-dimensional subspaces in the presence of outliers. We pose the problem using a density estimation formulation with an associated generative model. Based on this probability model, we first develop an iterative expectation-maximization (EM) algorithm and then derive its global solution. In addition, we develop two Bayesian methods based on variational Bayesian (VB) approximation, which are capable of automatic dimensionality selection. While the first method is based on an alternating optimization scheme for all unknowns, the second method makes use of recent results in VB matrix factorization leading to fast and effective estimation.