Uncertainty
Scalable Teacher Forcing Network for Semi-Supervised Large Scale Data Streams
Pratama, Mahardhika, Za'in, Choiru, Lughofer, Edwin, Pardede, Eric, Rahayu, Dwi A. P.
The large-scale data stream problem refers to high-speed information flow which cannot be processed in scalable manner under a traditional computing platform. This problem also imposes expensive labelling cost making the deployment of fully supervised algorithms unfeasible. On the other hand, the problem of semi-supervised large-scale data streams is little explored in the literature because most works are designed in the traditional single-node computing environments while also being fully supervised approaches. This paper offers Weakly Supervised Scalable Teacher Forcing Network (WeScatterNet) to cope with the scarcity of labelled samples and the large-scale data streams simultaneously. WeScatterNet is crafted under distributed computing platform of Apache Spark with a data-free model fusion strategy for model compression after parallel computing stage. It features an open network structure to address the global and local drift problems while integrating a data augmentation, annotation and auto-correction ($DA^3$) method for handling partially labelled data streams. The performance of WeScatterNet is numerically evaluated in the six large-scale data stream problems with only $25\%$ label proportions. It shows highly competitive performance even if compared with fully supervised learners with $100\%$ label proportions.
Conjugate Energy-Based Models
Wu, Hao, Esmaeili, Babak, Wick, Michael, Tristan, Jean-Baptiste, van de Meent, Jan-Willem
In this paper, we propose conjugate energy-based models (CEBMs), a new class of energy-based models that define a joint density over data and latent variables. The joint density of a CEBM decomposes into an intractable distribution over data and a tractable posterior over latent variables. CEBMs have similar use cases as variational autoencoders, in the sense that they learn an unsupervised mapping from data to latent variables. However, these models omit a generator network, which allows them to learn more flexible notions of similarity between data points. Our experiments demonstrate that conjugate EBMs achieve competitive results in terms of image modelling, predictive power of latent space, and out-of-domain detection on a variety of datasets.
Active Learning with Multifidelity Modeling for Efficient Rare Event Simulation
Dhulipala, S. L. N., Shields, M. D., Spencer, B. W., Bolisetti, C., Slaughter, A. E., Laboure, V. M., Chakroborty, P.
While multifidelity modeling provides a cost-effective way to conduct uncertainty quantification with computationally expensive models, much greater efficiency can be achieved by adaptively deciding the number of required high-fidelity (HF) simulations, depending on the type and complexity of the problem and the desired accuracy in the results. We propose a framework for active learning with multifidelity modeling emphasizing the efficient estimation of rare events. Our framework works by fusing a low-fidelity (LF) prediction with an HF-inferred correction, filtering the corrected LF prediction to decide whether to call the high-fidelity model, and for enhanced subsequent accuracy, adapting the correction for the LF prediction after every HF model call. The framework does not make any assumptions as to the LF model type or its correlations with the HF model. In addition, for improved robustness when estimating smaller failure probabilities, we propose using dynamic active learning functions that decide when to call the HF model. We demonstrate our framework using several academic case studies and two finite element (FE) model case studies: estimating Navier-Stokes velocities using the Stokes approximation and estimating stresses in a transversely isotropic model subjected to displacements via a coarsely meshed isotropic model. Across these case studies, not only did the proposed framework estimate the failure probabilities accurately, but compared with either Monte Carlo or a standard variance reduction method, it also required only a small fraction of the calls to the HF model.
MIxBN: library for learning Bayesian networks from mixed data
Bubnova, Anna V., Deeva, Irina, Kalyuzhnaya, Anna V.
This paper describes a new library for learning Bayesian networks from data containing discrete and continuous variables (mixed data). In addition to the classical learning methods on discretized data, this library proposes its algorithm that allows structural learning and parameters learning from mixed data without discretization since data discretization leads to information loss. This algorithm based on mixed MI score function for structural learning, and also linear regression and Gaussian distribution approximation for parameters learning. The library also offers two algorithms for enumerating graph structures - the greedy Hill-Climbing algorithm and the evolutionary algorithm. Thus the key capabilities of the proposed library are as follows: (1) structural and parameters learning of a Bayesian network on discretized data, (2) structural and parameters learning of a Bayesian network on mixed data using the MI mixed score function and Gaussian approximation, (3) launching learning algorithms on one of two algorithms for enumerating graph structures - Hill-Climbing and the evolutionary algorithm. Since the need for mixed data representation comes from practical necessity, the advantages of our implementations are evaluated in the context of solving approximation and gap recovery problems on synthetic data and real datasets.
Factor Graphs for Heterogeneous Bayesian Decentralized Data Fusion
This paper explores the use of factor graphs as an inference and analysis tool for Bayesian peer-to-peer decentralized data fusion. We propose a framework by which agents can each use local factor graphs to represent relevant partitions of a complex global joint probability distribution, thus allowing them to avoid reasoning over the entirety of a more complex model and saving communication as well as computation cost. This allows heterogeneous multi-robot systems to cooperate on a variety of real world, task oriented missions, where scalability and modularity are key. To develop the initial theory and analyze the limits of this approach, we focus our attention on static linear Gaussian systems in tree-structured networks and use Channel Filters (also represented by factor graphs) to explicitly track common information. We discuss how this representation can be used to describe various multi-robot applications and to design and analyze new heterogeneous data fusion algorithms. We validate our method in simulations of a multi-agent multi-target tracking and cooperative multi-agent mapping problems, and discuss the computation and communication gains of this approach.
Bayesian Inference in High-Dimensional Time-Serieswith the Orthogonal Stochastic Linear Mixing Model
Meng, Rui, Bouchard, Kristofer
Many modern time-series datasets contain large numbers of output response variables sampled for prolonged periods of time. For example, in neuroscience, the activities of 100s-1000's of neurons are recorded during behaviors and in response to sensory stimuli. Multi-output Gaussian process models leverage the nonparametric nature of Gaussian processes to capture structure across multiple outputs. However, this class of models typically assumes that the correlations between the output response variables are invariant in the input space. Stochastic linear mixing models (SLMM) assume the mixture coefficients depend on input, making them more flexible and effective to capture complex output dependence. However, currently, the inference for SLMMs is intractable for large datasets, making them inapplicable to several modern time-series problems. In this paper, we propose a new regression framework, the orthogonal stochastic linear mixing model (OSLMM) that introduces an orthogonal constraint amongst the mixing coefficients. This constraint reduces the computational burden of inference while retaining the capability to handle complex output dependence. We provide Markov chain Monte Carlo inference procedures for both SLMM and OSLMM and demonstrate superior model scalability and reduced prediction error of OSLMM compared with state-of-the-art methods on several real-world applications. In neurophysiology recordings, we use the inferred latent functions for compact visualization of population responses to auditory stimuli, and demonstrate superior results compared to a competing method (GPFA). Together, these results demonstrate that OSLMM will be useful for the analysis of diverse, large-scale time-series datasets.
Task-agnostic Continual Learning with Hybrid Probabilistic Models
Kirichenko, Polina, Farajtabar, Mehrdad, Rao, Dushyant, Lakshminarayanan, Balaji, Levine, Nir, Li, Ang, Hu, Huiyi, Wilson, Andrew Gordon, Pascanu, Razvan
Learning new tasks continuously without forgetting on a constantly changing data distribution is essential for real-world problems but extremely challenging for modern deep learning. In this work we propose HCL, a Hybrid generative-discriminative approach to Continual Learning for classification. We model the distribution of each task and each class with a normalizing flow. The flow is used to learn the data distribution, perform classification, identify task changes, and avoid forgetting, all leveraging the invertibility and exact likelihood which are uniquely enabled by the normalizing flow model. We use the generative capabilities of the flow to avoid catastrophic forgetting through generative replay and a novel functional regularization technique. For task identification, we use state-of-the-art anomaly detection techniques based on measuring the typicality of the model's statistics. We demonstrate the strong performance of HCL on a range of continual learning benchmarks such as split-MNIST, split-CIFAR, and SVHN-MNIST.
Approximate Bayesian Computation with Path Signatures
Dyer, Joel, Cannon, Patrick, Schmon, Sebastian M
Simulation models of scientific interest often lack a tractable likelihood function, precluding standard likelihood-based statistical inference. A popular likelihood-free method for inferring simulator parameters is approximate Bayesian computation, where an approximate posterior is sampled by comparing simulator output and observed data. However, effective measures of closeness between simulated and observed data are generally difficult to construct, particularly for time series data which are often high-dimensional and structurally complex. Existing approaches typically involve manually constructing summary statistics, requiring substantial domain expertise and experimentation, or rely on unrealistic assumptions such as iid data. Others are inappropriate in more complex settings like multivariate or irregularly sampled time series data. In this paper, we introduce the use of path signatures as a natural candidate feature set for constructing distances between time series data for use in approximate Bayesian computation algorithms. Our experiments show that such an approach can generate more accurate approximate Bayesian posteriors than existing techniques for time series models.
Learning Stochastic Majority Votes by Minimizing a PAC-Bayes Generalization Bound
Zantedeschi, Valentina, Viallard, Paul, Morvant, Emilie, Emonet, Rémi, Habrard, Amaury, Germain, Pascal, Guedj, Benjamin
We investigate a stochastic counterpart of majority votes over finite ensembles of classifiers, and study its generalization properties. While our approach holds for arbitrary distributions, we instantiate it with Dirichlet distributions: this allows for a closed-form and differentiable expression for the expected risk, which then turns the generalization bound into a tractable training objective. The resulting stochastic majority vote learning algorithm achieves state-of-the-art accuracy and benefits from (non-vacuous) tight generalization bounds, in a series of numerical experiments when compared to competing algorithms which also minimize PAC-Bayes objectives -- both with uninformed (data-independent) and informed (data-dependent) priors.
ADAVI: Automatic Dual Amortized Variational Inference Applied To Pyramidal Bayesian Models
Rouillard, Louis, Wassermann, Demian
Frequently, population studies feature pyramidally-organized data represented using Hierarchical Bayesian Models (HBM) enriched with plates. These models can become prohibitively large in settings such as neuroimaging, where a sample is composed of a functional MRI signal measured on 64 thousand brain locations, across 4 measurement sessions, and at least tens of subjects. Even a reduced example on a specific cortical region of 300 brain locations features around 1 million parameters, hampering the usage of modern density estimation techniques such as Simulation-Based Inference (SBI). To infer parameter posterior distributions in this challenging class of problems, we designed a novel methodology that automatically produces a variational family dual to a target HBM. This variatonal family, represented as a neural network, consists in the combination of an attention-based hierarchical encoder feeding summary statistics to a set of normalizing flows. Our automatically-derived neural network exploits exchangeability in the plate-enriched HBM and factorizes its parameter space. The resulting architecture reduces by orders of magnitude its parameterization with respect to that of a typical SBI representation, while maintaining expressivity. Our method performs inference on the specified HBM in an amortized setup: once trained, it can readily be applied to a new data sample to compute the parameters' full posterior. We demonstrate the capability of our method on simulated data, as well as a challenging high-dimensional brain parcellation experiment. We also open up several questions that lie at the intersection between SBI techniques and structured Variational Inference.