Uncertainty
Kernel Bayes' Rule
A nonparametric kernel-based method for realizing Bayes' rule is proposed, based on kernel representations of probabilities in reproducing kernel Hilbert spaces. The prior and conditional probabilities are expressed as empirical kernel mean and covariance operators, respectively, and the kernel mean of the posterior distribution is computed in the form of a weighted sample. The kernel Bayes' rule can be applied to a wide variety of Bayesian inference problems: we demonstrate Bayesian computation without likelihood, and filtering with a nonparametric state-space model. A consistency rate for the posterior estimate is established.
Sparse Bayesian Multi-Task Learning
We propose a new sparse Bayesian model for multi-task regression and classification. The model is able to capture correlations between tasks, or more specifically a low-rank approximation of the covariance matrix, while being sparse in the features. We introduce a general family of group sparsity inducing priors based on matrix-variate Gaussian scale mixtures. We show the amount of sparsity can be learnt from the data by combining an approximate inference approach with type II maximum likelihood estimation of the hyperparameters. Empirical evaluations on data sets from biology and vision demonstrate the applicability of the model, where on both regression and classification tasks it achieves competitive predictive performance compared to previously proposed methods.
Bayesian Partitioning of Large-Scale Distance Data
A Bayesian approach to partitioning distance matrices is presented. It is inspired by the'Translation-Invariant Wishart-Dirichlet' process (TIWD) in (Vogt et al., 2010) and shares a number of advantageous properties like the fully probabilistic nature of the inference model, automatic selection of the number of clusters and applicability in semi-supervised settings. In addition, our method (which we call'fastTIWD') overcomes the main shortcoming of the original TIWD, namely its high computational costs. The fastTIWD reduces the workload in each iteration of a Gibbs sampler from O(n 3) in the TIWD to O(n 2). Our experiments show that this cost reduction does not compromise the quality of the inferred partitions. With this new method it is now possible to'mine' large relational datasets with a probabilistic model, thereby automatically detecting new and potentially interesting clusters.
Automated Refinement of Bayes Networks' Parameters based on Test Ordering Constraints
In this paper, we derive a method to refine a Bayes network diagnostic model by exploiting constraints implied by expert decisions on test ordering. At each step, the expert executes an evidence gathering test, which suggests the test's relative diagnostic value. We demonstrate that consistency with an expert's test selection leads to non-convex constraints on the model parameters. We incorporate these constraints by augmenting the network with nodes that represent the constraint likelihoods. Gibbs sampling, stochastic hill climbing and greedy search algorithms are proposed to find a MAP estimate that takes into account test ordering constraints and any data available.
Query-Aware MCMC
Traditional approaches to probabilistic inference such as loopy belief propagation and Gibbs sampling typically compute marginals for it all the unobserved variables in a graphical model. However, in many real-world applications the user's interests are focused on a subset of the variables, specified by a query. In this case it would be wasteful to uniformly sample, say, one million variables when the query concerns only ten. In this paper we propose a query-specific approach to MCMC that accounts for the query variables and their generalized mutual information with neighboring variables in order to achieve higher computational efficiency. Surprisingly there has been almost no previous work on query-aware MCMC. We demonstrate the success of our approach with positive experimental results on a wide range of graphical models.
Bayesian Bias Mitigation for Crowdsourcing
Biased labelers are a systemic problem in crowdsourcing, and a comprehensive toolbox for handling their responses is still being developed. A typical crowdsourcing application can be divided into three steps: data collection, data curation, and learning. At present these steps are often treated separately. We present Bayesian Bias Mitigation for Crowdsourcing (BBMC), a Bayesian model to unify all three. Most data curation methods account for the {\it effects} of labeler bias by modeling all labels as coming from a single latent truth.
Probabilistic Modeling of Dependencies Among Visual Short-Term Memory Representations
Extensive evidence suggests that items are not encoded independently in visual short-term memory (VSTM). However, previous research has not quantitatively considered how the encoding of an item influences the encoding of other items. We report the results of an experiment designed to determine the specific form of the stimulus-dependence of the mean and the covariance matrix. We find that the magnitude of the covariance between the representations of two items is a monotonically decreasing function of the difference between the items' feature values, similar to a Gaussian process with a distance-dependent, stationary kernel function. We further show that this type of covariance function can be explained as a natural consequence of encoding multiple stimuli in a population of neurons with correlated responses.
Label Ranking with Partial Abstention based on Thresholded Probabilistic Models
Several machine learning methods allow for abstaining from uncertain predictions. While being common for settings like conventional classification, abstention has been studied much less in learning to rank. We address abstention for the label ranking setting, allowing the learner to declare certain pairs of labels as being incomparable and, thus, to predict partial instead of total orders. In our method, such predictions are produced via thresholding the probabilities of pairwise preferences between labels, as induced by a predicted probability distribution on the set of all rankings. We formally analyze this approach for the Mallows and the Plackett-Luce model, showing that it produces proper partial orders as predictions and characterizing the expressiveness of the induced class of partial orders.
On Lifting the Gibbs Sampling Algorithm
Statistical relational learning models combine the power of first-order logic, the de facto tool for handling relational structure, with that of probabilistic graphical models, the de facto tool for handling uncertainty. Lifted probabilistic inference algorithms for them have been the subject of much recent research. The main idea in these algorithms is to improve the speed, accuracy and scalability of existing graphical models' inference algorithms by exploiting symmetry in the first-order representation. In this paper, we consider blocked Gibbs sampling, an advanced variation of the classic Gibbs sampling algorithm and lift it to the first-order level. We propose to achieve this by partitioning the first-order atoms in the relational model into a set of disjoint clusters such that exact lifted inference is polynomial in each cluster given an assignment to all other atoms not in the cluster.
Efficient coding provides a direct link between prior and likelihood in perceptual Bayesian inference
A common challenge for Bayesian models of perception is the fact that the two fundamental Bayesian components, the prior distribution and the likelihood func- tion, are formally unconstrained. Here we argue that a neural system that emulates Bayesian inference is naturally constrained by the way it represents sensory infor- mation in populations of neurons. More specifically, we show that an efficient coding principle creates a direct link between prior and likelihood based on the underlying stimulus distribution. The resulting Bayesian estimates can show bi- ases away from the peaks of the prior distribution, a behavior seemingly at odds with the traditional view of Bayesian estimation, yet one that has been reported in human perception. We demonstrate that our framework correctly accounts for the repulsive biases previously reported for the perception of visual orientation, and show that the predicted tuning characteristics of the model neurons match the reported orientation tuning properties of neurons in primary visual cortex.