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 Uncertainty


Submanifold density estimation

Neural Information Processing Systems

Kernel density estimation is the most widely-used practical method for accurate nonparametric density estimation. However, long-standing worst-case theoretical results showing that its performance worsens exponentially with the dimension of the data have quashed its application to modern high-dimensional datasets for decades. In practice, it has been recognized that often such data have a much lower-dimensional intrinsic structure. We propose a small modification to kernel density estimation for estimating probability density functions on Riemannian submanifolds of Euclidean space. Using ideas from Riemannian geometry, we prove the consistency of this modified estimator and show that the convergence rate is determined by the intrinsic dimension of the submanifold. We conclude with empirical results demonstrating the behavior predicted by our theory.


Large Scale Nonparametric Bayesian Inference: Data Parallelisation in the Indian Buffet Process

Neural Information Processing Systems

Nonparametric Bayesian models provide a framework for flexible probabilistic modelling of complex datasets. Unfortunately, Bayesian inference methods often require high-dimensional averages and can be slow to compute, especially with the potentially unbounded representations associated with nonparametric models. We address the challenge of scaling nonparametric Bayesian inference to the increasingly large datasets found in real-world applications, focusing on the case of parallelising inference in the Indian Buffet Process (IBP). Our approach divides a large data set between multiple processors. The processors use message passing to compute likelihoods in an asynchronous, distributed fashion and to propagate statistics about the global Bayesian posterior.


A Stochastic approximation method for inference in probabilistic graphical models

Neural Information Processing Systems

We describe a new algorithmic framework for inference in probabilistic models, and apply it to inference for latent Dirichlet allocation. Our framework adopts the methodology of variational inference, but unlike existing variational methods such as mean field and expectation propagation it is not restricted to tractable classes of approximating distributions. Our approach can also be viewed as a sequential Monte Carlo (SMC) method, but unlike existing SMC methods there is no need to design the artificial sequence of distributions. Notably, our framework offers a principled means to exchange the variance of an importance sampling estimate for the bias incurred through variational approximation. Experiments on a challenging inference problem in population genetics demonstrate improvements in stability and accuracy over existing methods, and at a comparable cost.


Nonparametric Bayesian Models for Unsupervised Event Coreference Resolution

Neural Information Processing Systems

We present a sequence of unsupervised, nonparametric Bayesian models for clustering complex linguistic objects. In this approach, we consider a potentially infinite number of features and categorical outcomes. We evaluate these models for the task of within- and cross-document event coreference on two corpora. All the models we investigated show significant improvements when compared against an existing baseline for this task.


Probabilistic Inference and Differential Privacy

Neural Information Processing Systems

We identify and investigate a strong connection between probabilistic inference and differential privacy, the latter being a recent privacy definition that permits only indirect observation of data through noisy measurement. Previous research on differential privacy has focused on designing measurement processes whose output is likely to be useful on its own. We consider the potential of applying probabilistic inference to the measurements and measurement process to derive posterior distributions over the data sets and model parameters thereof. We find that probabilistic inference can improve accuracy, integrate multiple observations, measure uncertainty, and even provide posterior distributions over quantities that were not directly measured.


Implicit encoding of prior probabilities in optimal neural populations

Neural Information Processing Systems

Optimal coding provides a guiding principle for understanding the representation of sensory variables in neural populations. Here we consider the influence of a prior probability distribution over sensory variables on the optimal allocation of cells and spikes in a neural population. We model the spikes of each cell as samples from an independent Poisson process with rate governed by an associated tuning curve. For this response model, we approximate the Fisher information in terms of the density and amplitude of the tuning curves, under the assumption that tuning width varies inversely with cell density. We consider a family of objective functions based on the expected value, over the sensory prior, of a functional of the Fisher information.


Mixture of time-warped trajectory models for movement decoding

Neural Information Processing Systems

Applications of Brain-Machine-Interfaces typically estimate user intent based on biological signals that are under voluntary control. For example, we might want to estimate how a patient with a paralyzed arm wants to move based on residual muscle activity. To solve such problems it is necessary to integrate obtained information over time. To do so, state of the art approaches typically use a probabilistic model of how the state, e.g. We wanted to further develop this approach using two intuitive insights: (1) At any given point of time there may be a small set of likely movement targets, potentially identified by the location of objects in the workspace or by gaze information from the user.


Approximate inference in continuous time Gaussian-Jump processes

Neural Information Processing Systems

We present a novel approach to inference in conditionally Gaussian continuous time stochastic processes, where the latent process is a Markovian jump process. We first consider the case of jump-diffusion processes, where the drift of a linear stochastic differential equation can jump at arbitrary time points. We derive partial differential equations for exact inference and present a very efficient mean field approximation. By introducing a novel lower bound on the free energy, we then generalise our approach to Gaussian processes with arbitrary covariance, such as the non-Markovian RBF covariance. We present results on both simulated and real data, showing that the approach is very accurate in capturing latent dynamics and can be useful in a number of real data modelling tasks.


Global seismic monitoring as probabilistic inference

Neural Information Processing Systems

The International Monitoring System (IMS) is a global network of sensors whose purpose is to identify potential violations of the Comprehensive Nuclear-Test-Ban Treaty (CTBT), primarily through detection and localization of seismic events. We report on the first stage of a project to improve on the current automated software system with a Bayesian inference system that computes the most likely global event history given the record of local sensor data. The new system, VISA (Vertically Integrated Seismological Analysis), is based on empirically calibrated, generative models of event occurrence, signal propagation, and signal detection. VISA exhibits significantly improved precision and recall compared to the current operational system and is able to detect events that are missed even by the human analysts who post-process the IMS output.


An Approximate Inference Approach to Temporal Optimization in Optimal Control

Neural Information Processing Systems

Algorithms based on iterative local approximations present a practical approach to optimal control in robotic systems. However, they generally require the temporal parameters (for e.g. the movement duration or the time point of reaching an intermediate goal) to be specified \textit{a priori}. Here, we present a methodology that is capable of jointly optimising the temporal parameters in addition to the control command profiles. The presented approach is based on a Bayesian canonical time formulation of the optimal control problem, with the temporal mapping from canonical to real time parametrised by an additional control variable. An approximate EM algorithm is derived that efficiently optimises both the movement duration and control commands offering, for the first time, a practical approach to tackling generic via point problems in a systematic way under the optimal control framework. The proposed approach is evaluated on simulations of a redundant robotic plant.