Bayesian Inference
Handling Missing Data with Variational Bayesian Learning of ICA
Chan, Kwokleung, Lee, Te-Won, Sejnowski, Terrence J.
Missing data is common in real-world datasets and is a problem for many estimation techniques. We have developed a variational Bayesian method to perform Independent Component Analysis (ICA) on high-dimensional data containing missing entries. Missing data are handled naturally in the Bayesian framework by integrating the generative density model. Modeling the distributions of the independent sources with mixture of Gaussians allows sources to be estimated with different kurtosis and skewness. The variational Bayesian method automatically determines the dimensionality of the data and yields an accurate density model for the observed data without overfitting problems. This allows direct probability estimation of missing values in the high dimensional space and avoids dimension reduction preprocessing which is not feasible with missing data.
Regularized Greedy Importance Sampling
Southey, Finnegan, Schuurmans, Dale, Ghodsi, Ali
Greedy importance sampling is an unbiased estimation technique that reduces the variance of standard importance sampling by explicitly searching for modes in the estimation objective. Previous work has demonstrated the feasibility of implementing this method and proved that the technique is unbiased in both discrete and continuous domains. In this paper we present a reformulation of greedy importance sampling that eliminates the free parameters from the original estimator, and introduces a new regularization strategy that further reduces variance without compromising unbiasedness. The resulting estimator is shown to be effective for difficult estimation problems arising in Markov random field inference. In particular, improvements are achieved over standard MCMC estimators when the distribution has multiple peaked modes.
Adaptive Classification by Variational Kalman Filtering
Sykacek, Peter, Roberts, Stephen J.
We propose in this paper a probabilistic approach for adaptive inference of generalized nonlinear classification that combines the computational advantage of a parametric solution with the flexibility of sequential sampling techniques. We regard the parameters of the classifier as latent states in a first order Markov process and propose an algorithm which can be regarded as variational generalization of standard Kalman filtering. The variational Kalman filter is based on two novel lower bounds that enable us to use a non-degenerate distribution over the adaptation rate. An extensive empirical evaluation demonstrates that the proposed method is capable of infering competitive classifiers both in stationary and non-stationary environments. Although we focus on classification, the algorithm is easily extended to other generalized nonlinear models.
Interpreting Neural Response Variability as Monte Carlo Sampling of the Posterior
Hoyer, Patrik O., Hyvรคrinen, Aapo
The responses of cortical sensory neurons are notoriously variable, with the number of spikes evoked by identical stimuli varying significantly from trial to trial. This variability is most often interpreted as'noise', purely detrimental to the sensory system. In this paper, we propose an alternative view in which the variability is related to the uncertainty, about world parameters, which is inherent in the sensory stimulus. Specifically, the responses of a population of neurons are interpreted as stochastic samples from the posterior distribution in a latent variable model. In addition to giving theoretical arguments supporting such a representational scheme, we provide simulations suggesting how some aspects of response variability might be understood in this framework.
Transductive and Inductive Methods for Approximate Gaussian Process Regression
Schwaighofer, Anton, Tresp, Volker
Gaussian process regression allows a simple analytical treatment of exact Bayesian inference and has been found to provide good performance, yet scales badly with the number of training data. In this paper we compare several approaches towards scaling Gaussian processes regression to large data sets: the subset of representers method, the reduced rank approximation, online Gaussian processes, and the Bayesian committee machine. Furthermore we provide theoretical insight into some of our experimental results. We found that subset of representers methods can give good and particularly fast predictions for data sets with high and medium noise levels. On complex low noise data sets, the Bayesian committee machine achieves significantly better accuracy, yet at a higher computational cost.
Bayesian Models of Inductive Generalization
Sanjana, Neville E., Tenenbaum, Joshua B.
We argue that human inductive generalization is best explained in a Bayesian framework, rather than by traditional models based on similarity computations. We go beyond previous work on Bayesian concept learning by introducing an unsupervised method for constructing flexible hypothesis spaces, and we propose a version of the Bayesian Occam's razor that trades off priors and likelihoods to prevent under-or over-generalization in these flexible spaces. We analyze two published data sets on inductive reasoning as well as the results of a new behavioral study that we have carried out.
Learning Sparse Multiscale Image Representations
Sallee, Phil, Olshausen, Bruno A.
We describe a method for learning sparse multiscale image representations using a sparse prior distribution over the basis function coefficients. The prior consists of a mixture of a Gaussian and a Dirac delta function, and thus encourages coefficients to have exact zero values. Coefficients for an image are computed by sampling from the resulting posterior distribution with a Gibbs sampler. The learned basis is similar to the Steerable Pyramid basis, and yields slightly higher SNR for the same number of active coefficients. Denoising using the learned image model is demonstrated for some standard test images, with results that compare favorably with other denoising methods.
Bayesian Estimation of Time-Frequency Coefficients for Audio Signal Enhancement
Wolfe, Patrick J., Godsill, Simon J.
The Bayesian paradigm provides a natural and effective means of exploiting prior knowledge concerning the time-frequency structure of sound signals such as speech and music--something which has often been overlooked in traditional audio signal processing approaches. Here, after constructing a Bayesian model and prior distributions capable of taking into account the time-frequency characteristics of typical audio waveforms, we apply Markov chain Monte Carlo methods in order to sample from the resultant posterior distribution of interest. We present speech enhancement results which compare favourably in objective terms with standard time-varying filtering techniques (and in several cases yield superior performance, both objectively and subjectively); moreover, in contrast to such methods, our results are obtained without an assumption of prior knowledge of the noise power.
A Model for Learning Variance Components of Natural Images
Karklin, Yan, Lewicki, Michael S.
We present a hierarchical Bayesian model for learning efficient codes of higher-order structure in natural images. The model, a nonlinear generalization of independent component analysis, replaces the standard assumption of independence for the joint distribution of coefficients with a distribution that is adapted to the variance structure of the coefficients of an efficient image basis. This offers a novel description of higherorder image structure and provides a way to learn coarse-coded, sparsedistributed representations of abstract image properties such as object location, scale, and texture.