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 Bayesian Inference


Kernel-based Generative Learning in Distortion Feature Space

arXiv.org Machine Learning

This paper presents a novel kernel-based generative classifier which is defined in a distortion subspace using polynomial series expansion, named Kernel-Distortion (KD) classifier. An iterative kernel selection algorithm is developed to steadily improve classification performance by repeatedly removing and adding kernels. The experimental results on character recognition application not only show that the proposed generative classifier performs better than many existing classifiers, but also illustrate that it has different recognition capability compared to the state-of-the-art discriminative classifier - deep belief network. The recognition diversity indicates that a hybrid combination of the proposed generative classifier and the discriminative classifier could further improve the classification performance. Two hybrid combination methods, cascading and stacking, have been implemented to verify the diversity and the improvement of the proposed classifier. Keywords: Distortion feature space, kernel-based generative classifier, hybrid classification, deep belief nets, character recognition 1. Introduction Learning and inference are two important aspects for any machine learning application.


FSMJ: Feature Selection with Maximum Jensen-Shannon Divergence for Text Categorization

arXiv.org Machine Learning

In this paper, we present a new wrapper feature selection approach based on Jensen-Shannon (JS) divergence, termed feature selection with maximum JS-divergence (FSMJ), for text categorization. Unlike most existing feature selection approaches, the proposed FSMJ approach is based on real-valued features which provide more information for discrimination than binary-valued features used in conventional approaches. We show that the FSMJ is a greedy approach and the JS-divergence monotonically increases when more features are selected. We conduct several experiments on real-life data sets, compared with the state-of-the-art feature selection approaches for text categorization. The superior performance of the proposed FSMJ approach demonstrates its effectiveness and further indicates its wide potential applications on data mining.


Spectral decomposition method of dialog state tracking via collective matrix factorization

arXiv.org Machine Learning

The task of dialog management is commonly decomposed into two sequential subtasks: dialog state tracking and dialog policy learning. In an end-to-end dialog system, the aim of dialog state tracking is to accurately estimate the true dialog state from noisy observations produced by the speech recognition and the natural language understanding modules. The state tracking task is primarily meant to support a dialog policy. From a probabilistic perspective, this is achieved by maintaining a posterior distribution over hidden dialog states composed of a set of context dependent variables. Once a dialog policy is learned, it strives to select an optimal dialog act given the estimated dialog state and a defined reward function. This paper introduces a novel method of dialog state tracking based on a bilinear algebric decomposition model that provides an efficient inference schema through collective matrix factorization. We evaluate the proposed approach on the second Dialog State Tracking Challenge (DSTC-2) dataset and we show that the proposed tracker gives encouraging results compared to the state-of-the-art trackers that participated in this standard benchmark. Finally, we show that the prediction schema is computationally efficient in comparison to the previous approaches.


Exact Bayesian inference for off-line change-point detection in tree-structured graphical models

arXiv.org Machine Learning

L. Schwaller · S. Robin Abstract We consider the problem of change-point detection in multivariate time-series. The multivariate distribution of the observations is supposed to follow a graphical model, whose graph and parameters are affected by abrupt changes throughout time. We demonstrate that it is possible to perform exact Bayesian inference whenever one considers a simple class of undirected graphs called spanning trees as possible structures. We are then able to integrate on the graph and segmentation spaces at the same time by combining classical dynamic programming with algebraic results pertaining to spanning trees. In particular, we show that quantities such as posterior distributions for change-points or posterior edge probabilities over time can efficiently be obtained. We illustrate our results on both synthetic and experimental data arising from biology and neuroscience. Keywords change-point detection, exact Bayesian inference, graphical model, multivariate time-series, spanning tree 1 Introduction We are interested in time-series data where several variables are observed throughout time. An assumption often made in multivariate settings is that there exists an underlying network describing the dependences between the different variables. When modelling time-series data, one is faced with a choice: shall this network be considered stationary or not? Taking the example of genomic data, it might for instance be un-L. This network might slowly evolve, or undergo abrupt changes leading to the initialisation of new morphological development stages in the organism of interest. Here, we focus our interest on the second scenario. The inference of the dependence structure ruling a multivariate time-series was first performed under the assumption that this structure was stationary ( e.g.


Bayesian Inference on Matrix Manifolds for Linear Dimensionality Reduction

arXiv.org Machine Learning

This natural paradigm extends the Bayesian framework to dimensionality reduction tasks in higher dimensions with simpler models at greater speeds. Here an orthogonal basis is treated as a single point on a manifold and is associated with a linear subspace on which observations vary maximally. Throughout this paper, we employ the Grassmann and Stiefel manifolds for various dimensionality reduction problems, explore the connection between the two manifolds, and use Hybrid Monte Carlo for posterior sampling on the Grassmannian for the first time. We delineate in which situations either manifold should be considered. Further, matrix manifold models are used to yield scientific insight in the context of cognitive neuroscience, and we conclude that our methods are suitable for basic inference as well as accurate prediction. All datasets and computer programs are publicly available at http://www.ics.uci.edu/


Learning Granger Causality for Hawkes Processes

arXiv.org Machine Learning

Learning Granger causality for general point processes is a very challenging task. In this paper, we propose an effective method, learning Granger causality, for a special but significant type of point processes --- Hawkes process. We reveal the relationship between Hawkes process's impact function and its Granger causality graph. Specifically, our model represents impact functions using a series of basis functions and recovers the Granger causality graph via group sparsity of the impact functions' coefficients. We propose an effective learning algorithm combining a maximum likelihood estimator (MLE) with a sparse-group-lasso (SGL) regularizer. Additionally, the flexibility of our model allows to incorporate the clustering structure event types into learning framework. We analyze our learning algorithm and propose an adaptive procedure to select basis functions. Experiments on both synthetic and real-world data show that our method can learn the Granger causality graph and the triggering patterns of the Hawkes processes simultaneously.


Scan Order in Gibbs Sampling: Models in Which it Matters and Bounds on How Much

arXiv.org Machine Learning

Gibbs sampling is a Markov Chain Monte Carlo sampling technique that iteratively samples variables from their conditional distributions. There are two common scan orders for the variables: random scan and systematic scan. Due to the benefits of locality in hardware, systematic scan is commonly used, even though most statistical guarantees are only for random scan. While it has been conjectured that the mixing times of random scan and systematic scan do not differ by more than a logarithmic factor, we show by counterexample that this is not the case, and we prove that that the mixing times do not differ by more than a polynomial factor under mild conditions. To prove these relative bounds, we introduce a method of augmenting the state space to study systematic scan using conductance.


Gaussian Processes for Music Audio Modelling and Content Analysis

arXiv.org Machine Learning

Real music signals are highly variable, yet they have strong statistical structure. Prior information about the underlying physical mechanisms by which sounds are generated and rules by which complex sound structure is constructed (notes, chords, a complete musical score), can be naturally unified using Bayesian modelling techniques. Typically algorithms for Automatic Music Transcription independently carry out individual tasks such as multiple-F0 detection and beat tracking. The challenge remains to perform joint estimation of all parameters. We present a Bayesian approach for modelling music audio, and content analysis. The proposed methodology based on Gaussian processes seeks joint estimation of multiple music concepts by incorporating into the kernel prior information about non-stationary behaviour, dynamics, and rich spectral content present in the modelled music signal. We illustrate the benefits of this approach via two tasks: pitch estimation, and inferring missing segments in a polyphonic audio recording.


On the Theory and Practice of Privacy-Preserving Bayesian Data Analysis

arXiv.org Machine Learning

Bayesian inference has great promise for the privacy-preserving analysis of sensitive data, as posterior sampling automatically preserves differential privacy, an algorithmic notion of data privacy, under certain conditions (Dimitrakakis et al., 2014; Wang et al., 2015b). While this one posterior sample (OPS) approach elegantly provides privacy "for free," it is data inefficient in the sense of asymptotic relative efficiency (ARE). We show that a simple alternative based on the Laplace mechanism, the workhorse of differential privacy, is as asymptotically efficient as non-private posterior inference, under general assumptions. This technique also has practical advantages including efficient use of the privacy budget for MCMC. We demonstrate the practicality of our approach on a time-series analysis of sensitive military records from the Afghanistan and Iraq wars disclosed by the Wikileaks organization.


A moment-matching Ferguson and Klass algorithm

arXiv.org Machine Learning

Completely random measures (CRM) represent the key building block of a wide variety of popular stochastic models and play a pivotal role in modern Bayesian Nonparametrics. A popular representation of CRMs as a random series with decreasing jumps is due to Ferguson and Klass (1972). This can immediately be turned into an algorithm for sampling realizations of CRMs or more elaborate models involving transformed CRMs. However, concrete implementation requires to truncate the random series at some threshold resulting in an approximation error. The goal of this paper is to quantify the quality of the approximation by a moment-matching criterion, which consists in evaluating a measure of discrepancy between actual moments and moments based on the simulation output. Seen as a function of the truncation level, the methodology can be used to determine the truncation level needed to reach a certain level of precision. The resulting moment-matching \FK algorithm is then implemented and illustrated on several popular Bayesian nonparametric models.