Autoregressive (AR) language models generate text one token at a time, which limits their inference speed. Diffusion-based language models offer a promising alternative, as they can decode multiple tokens in parallel. However, we identify a key bottleneck in current diffusion LMs: the long decoding-window problem, where tokens generated far from the input context often become irrelevant or repetitive. Previous solutions like semi-autoregressive address this issue by splitting windows into blocks (sacrificing bidirectionality), but we find that this also leads to time-interval expansion problem, sacrificing the speed. Therefore, semi-AR eliminates the main advantages of diffusion models. To overcome this, we propose Convolutional decoding (Conv), a normalization-based method that narrows the decoding window without hard segmentation, leading to better fluency and flexibility. Additionally, we introduce Rejecting Rule-based Fine-Tuning (R2FT), a post-hoc training scheme that better aligns tokens at positions far from context. Our methods achieve state-of-the-art results on open-ended generation benchmarks (e.g., AlpacaEval) among diffusion LM baselines, with significantly lower step size than previous works, demonstrating both speed and quality improvements.

AI agents built on foundation models hold enormous promise. Current practice, however, focuses on a one-task-one-agent approach, which not only falls short of scalability and generality, but also faces practical limitations from black-box autoregressive reasoning, where decisions unfold token by token without explicit simulation or counterfactual evaluation of outcomes. Humans, on the other hand, reason and plan by mentally simulating the consequences of actions within an internal model of the world -- a capability that supports flexible, goal-directed behavior across diverse contexts. Moving towards a more general and powerful AI agent, we introduce SimuRA, a goal-oriented architecture for generalized agentic reasoning. Based on a principled formulation of an optimal agent in any general environment, SimuRA addresses the limitations of black-box autoregressive reasoning by incorporating the world model for planning via simulation. Our prototype world model is implemented using LLMs as a substrate, leveraging the natural language as a discrete, hierarchical representation grounded in concepts for planning, while remaining model-agnostic. On complex web-browsing tasks such as flight search, SimuRA improves the success rate from 0% to 32.2% compared to a representative open-web agent baseline. Across tasks, world-model-based planning achieves up to 124% higher task completion rates than a matched black-box autoregressive baseline, demonstrating the advantages of simulative reasoning. We release ReasonerAgent-Web, a web-browsing agent built on SimuRA, as an open-source research demo.

Large language models (LLMs) store vast amounts of knowledge, which often requires updates to correct factual errors, incorporate newly acquired information, or adapt model behavior. Model editing methods have emerged as efficient solutions for such updates, offering localized and precise knowledge modification at significantly lower computational cost than continual training. In parallel, LLMs are frequently fine-tuned for a wide range of downstream tasks. However, the effect of fine-tuning on previously edited knowledge remains poorly understood. In this work, we systematically investigate how different fine-tuning objectives interact with various model editing techniques. Our findings show that edited knowledge is substantially more susceptible to forgetting during fine-tuning than intrinsic knowledge acquired through pre-training. This analysis highlights a key limitation of current editing approaches and suggests that evaluating edit robustness under downstream fine-tuning is critical for their practical deployment. We further find that knowledge retention can be significantly improved by either augmenting edit knowledge with paraphrases or by freezing layers associated with edited content in fine-tuning stage, offering insight for developing more robust editing algorithms.

Despite advances in reinforcement learning (RL)-based video reasoning with large language models (LLMs), data collection and fine-tuning remain significant challenges. These methods often rely on large-scale supervised fine-tuning (SFT) with extensive video data and long Chain-of-Thought (CoT) annotations, making them costly and hard to scale. To address this, we present Video-RTS, a new approach to improve video reasoning capability with drastically improved data efficiency by combining data-efficient RL with a video-adaptive test-time scaling (TTS) strategy. Building on observations about the data scaling, we skip the resource-intensive SFT step and employ efficient pure-RL training with output-based rewards, requiring no additional annotations or extensive fine-tuning. Furthermore, to utilize computational resources more efficiently, we introduce a sparse-to-dense video TTS strategy that improves inference by iteratively adding frames based on output consistency. We validate our approach on multiple video reasoning benchmarks, showing that Video-RTS surpasses existing video reasoning models by 2.4% in accuracy using only 3.6% training samples. Specifically, Video-RTS achieves a 4.2% improvement on Video-Holmes, a recent and challenging video reasoning benchmark. Notably, our pure RL training and adaptive video TTS offer complementary strengths, enabling Video-RTS's strong reasoning performance.

A challenge in human-AI decision-making is to balance three factors: the correctness of predictions, the cost of knowledge and reasoning complexity, and the confidence about whether to abstain from automated answers or escalate to human experts. In this work, we present a cascaded LLM decision framework that adaptively delegates tasks across multiple tiers of expertise -- a base model for initial candidate answers, a more capable and knowledgeable (but costlier) large model, and a human expert for when the model cascade abstains. Our method proceeds in two stages. First, a deferral policy determines whether to accept the base model's answer or regenerate it with the large model based on the confidence score. Second, an abstention policy decides whether the cascade model response is sufficiently certain or requires human intervention. Moreover, to overcome static policies and accommodate changing task difficulty, we incorporate an online learning mechanism which uses human feedback. We demonstrate this approach to general question-answering (ARC-Easy, ARC-Challenge, and MMLU) and medical question-answering (MedQA and MedMCQA). Our results demonstrate that our cascaded strategy outperforms single-model baselines in most cases, achieving higher accuracy while reducing costs and providing a principled approach to handling abstentions.

Recent advances in Chain-of-Thought (CoT) reasoning have improved complex video understanding, but existing methods often struggle to adapt to domain-specific skills (e.g., event detection, spatial relation understanding, emotion understanding) over various video content. To address this, we propose Video-Skill-CoT (a.k.a. Video-SKoT), a framework that automatically constructs and leverages skill-aware CoT supervisions for domain-adaptive video reasoning. First, we construct skill-based CoT annotations: we extract domain-relevant reasoning skills from training questions, cluster them into a shared skill taxonomy, and create detailed multi-step CoT rationale tailored to each video-question pair for training. Second, we introduce a skill-specific expert learning framework. Each expert module specializes in a subset of reasoning skills and is trained with lightweight adapters using the collected CoT supervision. We demonstrate the effectiveness of the proposed approach on three video understanding benchmarks, where Video-SKoT consistently outperforms strong baselines. We also provide in-depth analyses on comparing different CoT annotation pipelines and learned skills over multiple video domains.

Retrieval-Augmented Generation (RAG) integrates external knowledge with Large Language Models (LLMs) to enhance factual correctness and mitigate hallucination. However, dense retrievers often become the bottleneck of RAG systems due to their limited parameters compared to LLMs and their inability to perform step-by-step reasoning. While prompt-based iterative RAG attempts to address these limitations, it is constrained by human-designed workflows. To address these limitations, we propose $\textbf{R3-RAG}$, which uses $\textbf{R}$einforcement learning to make the LLM learn how to $\textbf{R}$eason and $\textbf{R}$etrieve step by step, thus retrieving comprehensive external knowledge and leading to correct answers. R3-RAG is divided into two stages. We first use cold start to make the model learn the manner of iteratively interleaving reasoning and retrieval. Then we use reinforcement learning to further harness its ability to better explore the external retrieval environment. Specifically, we propose two rewards for R3-RAG: 1) answer correctness for outcome reward, which judges whether the trajectory leads to a correct answer; 2) relevance-based document verification for process reward, encouraging the model to retrieve documents that are relevant to the user question, through which we can let the model learn how to iteratively reason and retrieve relevant documents to get the correct answer. Experimental results show that R3-RAG significantly outperforms baselines and can transfer well to different retrievers. We release R3-RAG at https://github.com/Yuan-Li-FNLP/R3-RAG.

Unlocking deep and interpretable biological reasoning from complex genomic data remains a major AI challenge limiting scientific progress. While current DNA foundation models excel at representing sequences, they struggle with multi-step reasoning and lack transparent, biologically meaningful explanations. BioReason addresses this by tightly integrating a DNA foundation model with a large language model (LLM), enabling the LLM to directly interpret and reason over genomic information. Through supervised fine-tuning and reinforcement learning, BioReason learns to produce logical, biologically coherent deductions. It achieves major performance gains, boosting KEGG-based disease pathway prediction accuracy from 86% to 98% and improving variant effect prediction by an average of 15% over strong baselines. BioReason can reason over unseen biological entities and explain its decisions step by step, offering a transformative framework for interpretable, mechanistic AI in biology. All data, code, and checkpoints are available at https://github.com/bowang-lab/BioReason

Complex, temporally evolving phenomena, from climate to brain activity, are governed by dynamical systems (DS). DS reconstruction (DSR) seeks to infer generative surrogate models of these from observed data, reproducing their long-term behavior. Existing DSR approaches require purpose-training for any new system observed, lacking the zero-shot and in-context inference capabilities known from LLMs. Here we introduce DynaMix, a novel multivariate ALRNN-based mixture-of-experts architecture pre-trained for DSR, the first DSR model able to generalize zero-shot to out-of-domain DS. Just from a provided context signal, without any re-training, DynaMix faithfully forecasts the long-term evolution of novel DS where existing time series (TS) foundation models, like Chronos, fail -- at a fraction of the number of parameters (0.1%) and orders of magnitude faster inference times. DynaMix outperforms TS foundation models in terms of long-term statistics, and often also short-term forecasts, even on real-world time series, like traffic or weather data, typically used for training and evaluating TS models, but not at all part of DynaMix' training corpus. We illustrate some of the failure modes of TS models for DSR problems, and conclude that models built on DS principles may bear a huge potential also for advancing the TS prediction field.

Measuring scientific paper innovation is both important and challenging. Existing content-based methods often overlook the full-paper context, fail to capture the full scope of innovation, and lack generalization. We propose HSPIM, a hierarchical and training-free framework based on large language models (LLMs). It introduces a Paper-to-Sections-to-QAs decomposition to assess innovation. We segment the text by section titles and use zero-shot LLM prompting to implement section classification, question-answering (QA) augmentation, and weighted innovation scoring. The generated QA pair focuses on section-level innovation and serves as additional context to improve the LLM scoring. For each chunk, the LLM outputs a novelty score and a confidence score. We use confidence scores as weights to aggregate novelty scores into a paper-level innovation score. To further improve performance, we propose a two-layer question structure consisting of common and section-specific questions, and apply a genetic algorithm to optimize the question-prompt combinations. Furthermore, under the fine-grained structure of innovation, we extend HSPIM to an HSPIM$^+$ that generates novelty, contribution, and feasibility scores with respective confidence scores. Comprehensive experiments on scientific conference paper datasets show that HSPIM outperforms baseline methods in effectiveness, generalization, and interpretability. Demo code is available at https://github.com/Jasaxion/HSPIM.