Statistical Learning
An Efficient Clustering Algorithm Using Stochastic Association Model and Its Implementation Using Nanostructures
Morie, Takashi, Matsuura, Tomohiro, Nagata, Makoto, Iwata, Atsushi
This paper describes a clustering algorithm for vector quantizers using a "stochastic association model". It offers a new simple and powerful softmax adaptation rule. The adaptation process is the same as the online K-means clustering method except for adding random fluctuation in the distortion error evaluation process. Simulation results demonstrate that the new algorithm can achieve efficient adaptation as high as the "neural gas" algorithm, which is reported as one of the most efficient clustering methods. It is a key to add uncorrelated random fluctuation in the similarity evaluation process for each reference vector. For hardware implementation of this process, we propose a nanostructure, whose operation is described by a single-electron circuit. It positively uses fluctuation in quantum mechanical tunneling processes.
A Sequence Kernel and its Application to Speaker Recognition
A novel approach for comparing sequences of observations using an explicit-expansion kernel is demonstrated. The kernel is derived using the assumption of the independence of the sequence of observations and a mean-squared error training criterion. The use of an explicit expansion kernel reduces classifier model size and computation dramatically, resulting in model sizes and computation one-hundred times smaller in our application. The explicit expansion also preserves the computational advantages of an earlier architecture based on mean-squared error training. Training using standard support vector machine methodology gives accuracy that significantly exceeds the performance of state-of-the-art mean-squared error training for a speaker recognition task.
Probabilistic Abstraction Hierarchies
Segal, Eran, Koller, Daphne, Ormoneit, Dirk
Many domains are naturally organized in an abstraction hierarchy or taxonomy, where the instances in "nearby" classes in the taxonomy are similar. In this paper, we provide a general probabilistic framework for clustering data into a set of classes organized as a taxonomy, where each class is associated with a probabilistic model from which the data was generated. The clustering algorithm simultaneously optimizes three things: the assignment of data instances to clusters, the models associated with the clusters, and the structure of the abstraction hierarchy. A unique feature of our approach is that it utilizes global optimization algorithms for both of the last two steps, reducing the sensitivity to noise and the propensity to local maxima that are characteristic of algorithms such as hierarchical agglomerative clustering that only take local steps. We provide a theoretical analysis for our algorithm, showing that it converges to a local maximum of the joint likelihood of model and data.
Active Learning in the Drug Discovery Process
Warmuth, Manfred K. K., Rätsch, Gunnar, Mathieson, Michael, Liao, Jun, Lemmen, Christian
We investigate the following data mining problem from Computational Chemistry: From a large data set of compounds, find those that bind to a target molecule in as few iterations of biological testing as possible. In each iteration a comparatively small batch of compounds is screened for binding to the target. We apply active learning techniques for selecting the successive batches. One selection strategy picks unlabeled examples closest to the maximum margin hyperplane. Another produces many weight vectors by running perceptrons over multiple permutations of the data.
Agglomerative Multivariate Information Bottleneck
Slonim, Noam, Friedman, Nir, Tishby, Naftali
The information bottleneck method is an unsupervised model independent data organization technique. Given a joint distribution peA, B), this method constructs a new variable T that extracts partitions, or clusters, over the values of A that are informative about B. In a recent paper, we introduced a general principled framework for multivariate extensions of the information bottleneck method that allows us to consider multiple systems of data partitions that are interrelated. In this paper, we present a new family of simple agglomerative algorithms to construct such systems of interrelated clusters. We analyze the behavior of these algorithms and apply them to several real-life datasets.
Spectral Relaxation for K-means Clustering
Zha, Hongyuan, He, Xiaofeng, Ding, Chris, Gu, Ming, Simon, Horst D.
In K-means clusters are represented by centers of mass of their members, and it can be shown that the K-means algorithm of alternating between assigning cluster membership for each data vector to the nearest cluster center and computing the center of each cluster as the centroid of its member data vectors is equivalent to finding the minimum of a sum-of-squares cost function using coordinate descend. Despite the popularity of K means clustering, one of its major drawbacks is that the coordinate descend search method is prone to local minima. Much research has been done on computing refined initial points and adding explicit constraints to the sum-of-squares cost function for K-means clustering so that the search can converge to better local minimum [1,2]. In this paper we tackle the problem from a different angle: we find an equivalent formulation of the sum-of-squares minimization as a trace maximization problem with special constraints; relaxing the constraints leads to a maximization problem that possesses optimal global solutions. As a byproduct we also have an easily computable lower bound for the minimum of the sum-of-squares cost function. Our work is inspired by [9, 3] where connection to Gram matrix and extension of K means method to general Mercer kernels were investigated. The rest of the paper is organized as follows: in section 2, we derive the equivalent trace maximization formulation and discuss its spectral relaxation. In section 3, we discuss how to assign cluster membership using pivoted QR decomposition, taking into account the special structure of the partial eigenvector matrix. Finally, in section 4, we illustrate the performance of the clustering algorithms using document clustering as an example.
Discriminative Direction for Kernel Classifiers
In many scientific and engineering applications, detecting and understanding differences between two groups of examples can be reduced to a classical problem of training a classifier for labeling new examples while making as few mistakes as possible. In the traditional classification setting, the resulting classifier is rarely analyzed in terms of the properties of the input data captured by the discriminative model. However, such analysis is crucial if we want to understand and visualize the detected differences. We propose an approach to interpretation of the statistical model in the original feature space that allows us to argue about the model in terms of the relevant changes to the input vectors. For each point in the input space, we define a discriminative direction to be the direction that moves the point towards the other class while introducing as little irrelevant change as possible with respect to the classifier function. We derive the discriminative direction for kernel-based classifiers, demonstrate the technique on several examples and briefly discuss its use in the statistical shape analysis, an application that originally motivated this work.
Kernel Logistic Regression and the Import Vector Machine
The support vector machine (SVM) is known for its good performance in binary classification, but its extension to multi-class classification is still an ongoing research issue. In this paper, we propose a new approach for classification, called the import vector machine (IVM), which is built on kernel logistic regression (KLR). We show that the IVM not only performs as well as the SVM in binary classification, but also can naturally be generalized to the multi-class case. Furthermore, the IVM provides an estimate of the underlying probability. Similar to the "support points" of the SVM, the IVM model uses only a fraction of the training data to index kernel basis functions, typically a much smaller fraction than the SVM. This gives the IVM a computational advantage over the SVM, especially when the size of the training data set is large.
Infinite Mixtures of Gaussian Process Experts
Rasmussen, Carl E., Ghahramani, Zoubin
We present an extension to the Mixture of Experts (ME) model, where the individual experts are Gaussian Process (GP) regression models. Using an input-dependent adaptation of the Dirichlet Process, we implement a gating network for an infinite number of Experts. Inference in this model may be done efficiently using a Markov Chain relying on Gibbs sampling. The model allows the effective covariance function to vary with the inputs, and may handle large datasets - thus potentially overcoming two of the biggest hurdles with GP models.
Dynamic Time-Alignment Kernel in Support Vector Machine
Shimodaira, Hiroshi, Noma, Ken-ichi, Nakai, Mitsuru, Sagayama, Shigeki
A new class of Support Vector Machine (SVM) that is applicable to sequential-pattern recognition such as speech recognition is developed by incorporating an idea of nonlinear time alignment into the kernel function. Since the time-alignment operation of sequential pattern is embedded in the new kernel function, standard SVM training and classification algorithms can be employed without further modifications. The proposed SVM (DTAK-SVM) is evaluated in speaker-dependent speech recognition experiments of hand-segmented phoneme recognition. Preliminary experimental results show comparable recognition performance with hidden Markov models (HMMs).