We consider the problem of reconstructing patterns from a feature map. Learning algorithms using kernels to operate in a reproducing kernel Hilbert space (RKHS) express their solutions in terms of input points mapped into the RKHS. We introduce a technique based on kernel principal component analysis and regression to reconstruct corresponding patterns in the input space (aka pre-images) and review its performance in several applications requiring the construction of pre-images. The introduced technique avoids difficult and/or unstable numerical optimization, is easy to implement and, unlike previous methods, permits the computation of pre-images in discrete input spaces.

This paper is about non-approximate acceleration of high dimensional nonparametric operations such as k nearest neighbor classifiers and the prediction phase of Support Vector Machine classifiers. We attempt to exploit the fact that even if we want exact answers to nonparametric queries, we usually do not need to explicitly find the datapoints close to the query, but merely need to ask questions about the properties about that set of datapoints. This offers a small amount of computational leeway, and we investigate how much that leeway can be exploited. For clarity, this paper concentrates on pure k-NN classification and the prediction phase of SVMs. We introduce new ball tree algorithms that on real-world datasets give accelerations of 2-fold up to 100-fold compared against highly optimized traditional ball-tree-based k-NN.

The detection and pose estimation of people in images and video is made challenging by the variability of human appearance, the complexity of natural scenes, and the high dimensionality of articulated body models. To cope with these problems we represent the 3D human body as a graphical model in which the relationships between the body parts are represented by conditional probability distributions. We formulate the pose estimation problem as one of probabilistic inference over a graphical model where the random variables correspond to the individual limb parameters (position and orientation). Because the limbs are described by 6-dimensional vectors encoding pose in 3-space, discretization is impractical and the random variables in our model must be continuousvalued. To approximate belief propagation in such a graph we exploit a recently introduced generalization of the particle filter. This framework facilitates the automatic initialization of the body-model from low level cues and is robust to occlusion of body parts and scene clutter.

We propose an approach to learning the semantics of images which allows us to automatically annotate an image with keywords and to retrieve images based on text queries. We do this using a formalism that models the generation of annotated images. We assume that every image is divided into regions, each described by a continuous-valued feature vector. Given a training set of images with annotations, we compute a joint probabilistic model of image features and words which allow us to predict the probability of generating a word given the image regions. This may be used to automatically annotate and retrieve images given a word as a query. Experiments show that our model significantly outperforms the best of the previously reported results on the tasks of automatic image annotation and retrieval.

In order to understand AdaBoost's dynamics, especially its ability to maximize margins, we derive an associated simplified nonlinear iterated map and analyze its behavior in low-dimensional cases. We find stable cycles for these cases, which can explicitly be used to solve for Ada-Boost's output. By considering AdaBoost as a dynamical system, we are able to prove Rätsch and Warmuth's conjecture that AdaBoost may fail to converge to a maximal-margin combined classifier when given a'nonoptimal' weak learning algorithm.

We propose an unsupervised methodology using independent component analysis (ICA) to cluster genes from DNA microarray data. Based on an ICA mixture model of genomic expression patterns, linear and nonlinear ICA finds components that are specific to certain biological processes. Genes that exhibit significant up-regulation or down-regulation within each component are grouped into clusters. We test the statistical significance of enrichment of gene annotations within each cluster. ICA-based clustering outperformed other leading methods in constructing functionally coherent clusters on various datasets. This result supports our model of genomic expression data as composite effect of independent biological processes. Comparison of clustering performance among various ICA algorithms including a kernel-based nonlinear ICA algorithm shows that nonlinear ICA performed the best for small datasets and natural-gradient maximization-likelihood worked well for all the datasets.

We derive the limiting form of the eigenvalue spectrum for sample covariance matrices produced from non-isotropic data. For the analysis of standard PCA we study the case where the data has increased variance along a small number of symmetry-breaking directions. The spectrum depends on the strength of the symmetry-breaking signals and on a parameter α which is the ratio of sample size to data dimension. Results are derived in the limit of large data dimension while keeping α fixed. As α increases there are transitions in which delta functions emerge from the upper end of the bulk spectrum, corresponding to the symmetry-breaking directions in the data, and we calculate the bias in the corresponding eigenvalues. For kernel PCA the covariance matrix in feature space may contain symmetry-breaking structure even when the data components are independently distributed with equal variance. We show examples of phase-transition behaviour analogous to the PCA results in this case.

Many real-world domains are relational in nature, consisting of a set of objects related to each other in complex ways. This paper focuses on predicting the existence and the type of links between entities in such domains. We apply the relational Markov network framework of Taskar et al. to define a joint probabilistic model over the entire link graph -- entity attributes and links. The application of the RMN algorithm to this task requires the definition of probabilistic patterns over subgraph structures. We apply this method to two new relational datasets, one involving university webpages, and the other a social network. We show that the collective classification approach of RMNs, and the introduction of subgraph patterns over link labels, provide significant improvements in accuracy over flat classification, which attempts to predict each link in isolation.

We report and compare the performance of different learning algorithms based on data from cortical recordings. The task is to predict the orientation of visual stimuli from the activity of a population of simultaneously recorded neurons. We compare several ways of improving the coding of the input (i.e., the spike data) as well as of the output (i.e., the orientation), and report the results obtained using different kernel algorithms.

In this paper we present Discriminative Random Fields (DRF), a discriminative framework for the classification of natural image regions by incorporating neighborhood spatial dependencies in the labels as well as the observed data. The proposed model exploits local discriminative models and allows to relax the assumption of conditional independence of the observed data given the labels, commonly used in the Markov Random Field (MRF) framework. The parameters of the DRF model are learned using penalized maximum pseudo-likelihood method. Furthermore, the form of the DRF model allows the MAP inference for binary classification problems using the graph min-cut algorithms. The performance of the model was verified on the synthetic as well as the real-world images. The DRF model outperforms the MRF model in the experiments.