The objects in many real-world domains can be organized into hierarchies, where each internal node picks out a category of objects. Given a collection of features and relations defined over a set of objects, an annotated hierarchy includes a specification of the categories that are most useful for describing each individual feature and relation. We define a generative model for annotated hierarchies and the features and relations that they describe, and develop a Markov chain Monte Carlo scheme for learning annotated hierarchies. We show that our model discovers interpretable structure in several real-world data sets.

Correspondence algorithms typically struggle with shapes that display part-based variation. We present a probabilistic approach that matches shapes using independent part transformations, where the parts themselves are learnt during matching. Ideas from semi-supervised learning are used to bias the algorithm towards finding'perceptually valid' part structures. Shapes are represented by unlabeled point sets of arbitrary size and a background component is used to handle occlusion, local dissimilarity and clutter. Thus, unlike many shape matching techniques, our approach can be applied to shapes extracted from real images. Model parameters are estimated using an EM algorithm that alternates between finding a soft correspondence and computing the optimal part transformations using Procrustes analysis.

Correlation between instances is often modelled via a kernel function using input attributes of the instances. Relational knowledge can further reveal additional pairwise correlations between variables of interest. In this paper, we develop a class of models which incorporates both reciprocal relational information and input attributes using Gaussian process techniques. This approach provides a novel nonparametric Bayesian framework with a data-dependent covariance function for supervised learning tasks. We also apply this framework to semi-supervised learning. Experimental results on several real world data sets verify the usefulness of this algorithm.

Discriminative learning methods for classification perform well when training and test data are drawn from the same distribution. In many situations, though, we have labeled training data for a source domain, and we wish to learn a classifier which performs well on a target domain with a different distribution. Under what conditions can we adapt a classifier trained on the source domain for use in the target domain? Intuitively, a good feature representation is a crucial factor in the success of domain adaptation. We formalize this intuition theoretically with a generalization bound for domain adaption. Our theory illustrates the tradeoffs inherent in designing a representation for domain adaptation and gives a new justification for a recently proposed model. It also points toward a promising new model for domain adaptation: one which explicitly minimizes the difference between the source and target domains, while at the same time maximizing the margin of the training set.

If language users are rational, they might choose to structure their utterances so as to optimize communicative properties. In particular, information-theoretic and psycholinguistic considerations suggest that this may include maximizing the uniformity of information density in an utterance. We investigate this possibility in the context of syntactic reduction, where the speaker has the option of either marking a higher-order unit (a phrase) with an extra word, or leaving it unmarked. We demonstrate that speakers are more likely to reduce less information-dense phrases. In a second step, we combine a stochastic model of structured utterance production with a logistic-regression model of syntactic reduction to study which types of cues speakers employ when estimating the predictability of upcoming elements. We demonstrate that the trend toward predictability-sensitive syntactic reduction (Jaeger, 2006) is robust in the face of a wide variety of control variables, and present evidence that speakers use both surface and structural cues for predictability estimation.

We introduce a Gaussian process (GP) framework, stochastic relational models (SRM), for learning social, physical, and other relational phenomena where interactions between entities are observed. The key idea is to model the stochastic structure of entity relationships (i.e., links) via a tensor interaction of multiple GPs, each defined on one type of entities. These models in fact define a set of nonparametric priors on infinite dimensional tensor matrices, where each element represents a relationship between a tuple of entities. By maximizing the marginalized likelihood, information is exchanged between the participating GPs through the entire relational network, so that the dependency structure of links is messaged to the dependency of entities, reflected by the adapted GP kernels. The framework offers a discriminative approach to link prediction, namely, predicting the existences, strengths, or types of relationships based on the partially observed linkage network as well as the attributes of entities (if given). We discuss properties and variants of SRM and derive an efficient learning algorithm. Very encouraging experimental results are achieved on a toy problem and a user-movie preference link prediction task. In the end we discuss extensions of SRM to general relational learning tasks.

By adopting Gaussian process priors a fully Bayesian solution to the problem of integrating possibly heterogeneous data sets within a classification setting is presented. Approximate inference schemes employing Variational & Expectation Propagation based methods are developed and rigorously assessed. We demonstrate our approach to integrating multiple data sets on a large scale protein fold prediction problem where we infer the optimal combinations of covariance functions and achieve state-of-the-art performance without resorting to any ad hoc parameter tuning and classifier combination.

This paper proposes a new approach to model-based clustering under prior knowledge. The proposed formulation can be interpreted from two different angles: as penalized logistic regression, where the class labels are only indirectly observed (via the probability density of each class); as finite mixture learning under a grouping prior. To estimate the parameters of the proposed model, we derive a (generalized) EM algorithm with a closed-form E-step, in contrast with other recent approaches to semi-supervised probabilistic clustering which require Gibbs sampling or suboptimal shortcuts. We show that our approach is ideally suited for image segmentation: it avoids the combinatorial nature Markov random field priors, and opens the door to more sophisticated spatial priors (e.g., wavelet-based) in a simple and computationally efficient way. Finally, we extend our formulation to work in unsupervised, semi-supervised, or discriminative modes.

In this paper, we formalize multi-instance multi-label learning, where each training example is associated with not only multiple instances but also multiple class labels. Such a problem can occur in many real-world tasks, e.g. an image usually contains multiple patches each of which can be described by a feature vector, and the image can belong to multiple categories since its semantics can be recognized in different ways. We analyze the relationship between multi-instance multi-label learning and the learning frameworks of traditional supervised learning, multiinstance learning and multi-label learning.

A key challenge in designing analog-to-digital converters for cortically implanted prosthesis is to sense and process high-dimensional neural signals recorded by the micro-electrode arrays. In this paper, we describe a novel architecture for analog-to-digital (A/D) conversion that combines Σ conversion with spatial de-correlation within a single module. The architecture called multiple-input multiple-output (MIMO) Σ is based on a min-max gradient descent optimization of a regularized linear cost function that naturally lends to an A/D formulation. Using an online formulation, the architecture can adapt to slow variations in cross-channel correlations, observed due to relative motion of the microelectrodes with respect to the signal sources. Experimental results with real recorded multi-channel neural data demonstrate the effectiveness of the proposed algorithm in alleviating cross-channel redundancy across electrodes and performing data-compression directly at the A/D converter.