Variable selection and dimension reduction are two commonly adopted approaches for high-dimensional data analysis, but have traditionally been treated separately. Here we propose an integrated approach, called sparse gradient learning (SGL), for variable selection and dimension reduction via learning the gradients of the prediction function directly from samples. By imposing a sparsity constraint on the gradients, variable selection is achieved by selecting variables corresponding to non-zero partial derivatives, and effective dimensions are extracted based on the eigenvectors of the derived sparse empirical gradient covariance matrix. An error analysis is given for the convergence of the estimated gradients to the true ones in both the Euclidean and the manifold setting. We also develop an efficient forward-backward splitting algorithm to solve the SGL problem, making the framework practically scalable for medium or large datasets. The utility of SGL for variable selection and feature extraction is explicitly given and illustrated on artificial data as well as real-world examples. The main advantages of our method include variable selection for both linear and nonlinear predictions, effective dimension reduction with sparse loadings, and an efficient algorithm for large p, small n problems.

The book deals with the supervised-learning problem for both regression and classification, and includes detailed algorithms. A wide variety of covariance (kernel) functions are presented and their properties discussed. Model selection is discussed both from a Bayesian and a classical perspective. Many connections to other well-known techniques from machine learning and statistics are discussed, including support-vector machines, neural networks, splines, regularization networks, relevance vector machines and others. Theoretical issues including learning curves and the PAC-Bayesian framework are treated, and several approximation methods for learning with large datasets are discussed.

The European Conference on Case-Based Reasoning (CBR) in 2008 marked 15 years of international and European CBR conferences where almost seven hundred research papers were published. In this report we review the research themes covered in these papers and identify the topics that are active at the moment. The main mechanism for this analysis is a clustering of the research papers based on both co-citation links and text similarity. It is interesting to note that the core set of papers has attracted citations from almost three thousand papers outside the conference collection so it is clear that the CBR conferences are a sub-part of a much larger whole. It is remarkable that the research themes revealed by this analysis do not map directly to the sub-topics of CBR that might appear in a textbook. Instead they reflect the applications-oriented focus of CBR research, and cover the promising application areas and research challenges that are faced.

The major challenge in designing a discriminative learning algorithm for predicting structured data is to address the computational issues arising from the exponential size of the output space. Existing algorithms make different assumptions to ensure efficient, polynomial time estimation of model parameters. For several combinatorial structures, including cycles, partially ordered sets, permutations and other graph classes, these assumptions do not hold. In this thesis, we address the problem of designing learning algorithms for predicting combinatorial structures by introducing two new assumptions: (i) The first assumption is that a particular counting problem can be solved efficiently. The consequence is a generalisation of the classical ridge regression for structured prediction. (ii) The second assumption is that a particular sampling problem can be solved efficiently. The consequence is a new technique for designing and analysing probabilistic structured prediction models. These results can be applied to solve several complex learning problems including but not limited to multi-label classification, multi-category hierarchical classification, and label ranking.

Heavy-tailed distributions are frequently used to enhance the robustness of regression and classification methods to outliers in output space. Often, however, we are confronted with "outliers" in input space, which are isolated observations in sparsely populated regions. We show that heavy-tailed stochastic processes (which we construct from Gaussian processes via a copula), can be used to improve robustness of regression and classification estimators to such outliers by selectively shrinking them more strongly in sparse regions than in dense regions. We carry out a theoretical analysis to show that selective shrinkage occurs, provided the marginals of the heavy-tailed process have sufficiently heavy tails. The analysis is complemented by experiments on biological data which indicate significant improvements of estimates in sparse regions while producing competitive results in dense regions.

Undirected graphical models encode in a graph $G$ the dependency structure of a random vector $Y$. In many applications, it is of interest to model $Y$ given another random vector $X$ as input. We refer to the problem of estimating the graph $G(x)$ of $Y$ conditioned on $X=x$ as ``graph-valued regression.'' In this paper, we propose a semiparametric method for estimating $G(x)$ that builds a tree on the $X$ space just as in CART (classification and regression trees), but at each leaf of the tree estimates a graph. We call the method ``Graph-optimized CART,'' or Go-CART. We study the theoretical properties of Go-CART using dyadic partitioning trees, establishing oracle inequalities on risk minimization and tree partition consistency. We also demonstrate the application of Go-CART to a meteorological dataset, showing how graph-valued regression can provide a useful tool for analyzing complex data.

A challenging problem in estimating high-dimensional graphical models is to choose the regularization parameter in a data-dependent way. The standard techniques include $K$-fold cross-validation ($K$-CV), Akaike information criterion (AIC), and Bayesian information criterion (BIC). Though these methods work well for low-dimensional problems, they are not suitable in high dimensional settings. In this paper, we present StARS: a new stability-based method for choosing the regularization parameter in high dimensional inference for undirected graphs. The method has a clear interpretation: we use the least amount of regularization that simultaneously makes a graph sparse and replicable under random sampling. This interpretation requires essentially no conditions. Under mild conditions, we show that StARS is partially sparsistent in terms of graph estimation: i.e. with high probability, all the true edges will be included in the selected model even when the graph size diverges with the sample size. Empirically, the performance of StARS is compared with the state-of-the-art model selection procedures, including $K$-CV, AIC, and BIC, on both synthetic data and a real microarray dataset. StARS outperforms all these competing procedures.

The Dendritic Cell Algorithm (DCA) is an immune-inspired algorithm, developed for the purpose of anomaly detection. The algorithm performs multi-sensor data fusion and correlation which results in a 'context aware' detection system. Previous applications of the DCA have included the detection of potentially malicious port scanning activity, where it has produced high rates of true positives and low rates of false positives. In this work we aim to compare the performance of the DCA and of a Self-Organizing Map (SOM) when applied to the detection of SYN port scans, through experimental analysis. A SOM is an ideal candidate for comparison as it shares similarities with the DCA in terms of the data fusion method employed. It is shown that the results of the two systems are comparable, and both produce false positives for the same processes. This shows that the DCA can produce anomaly detection results to the same standard as an established technique.

The Lady Maisry ballads afford us a framework within which to segment a storyline into its major components. Segments and as a consequence nodal points are discussed for nine different variants of the Lady Maisry story of a (young) woman being burnt to death by her family, on account of her becoming pregnant by a foreign personage. We motivate the importance of nodal points in textual and literary analysis. We show too how the openings of the nine variants can be analyzed comparatively, and also the conclusions of the ballads.

Representing distributions over permutations can be a daunting task due to the fact that the number of permutations of $n$ objects scales factorially in $n$. One recent way that has been used to reduce storage complexity has been to exploit probabilistic independence, but as we argue, full independence assumptions impose strong sparsity constraints on distributions and are unsuitable for modeling rankings. We identify a novel class of independence structures, called \emph{riffled independence}, encompassing a more expressive family of distributions while retaining many of the properties necessary for performing efficient inference and reducing sample complexity. In riffled independence, one draws two permutations independently, then performs the \emph{riffle shuffle}, common in card games, to combine the two permutations to form a single permutation. Within the context of ranking, riffled independence corresponds to ranking disjoint sets of objects independently, then interleaving those rankings. In this paper, we provide a formal introduction to riffled independence and present algorithms for using riffled independence within Fourier-theoretic frameworks which have been explored by a number of recent papers. Additionally, we propose an automated method for discovering sets of items which are riffle independent from a training set of rankings. We show that our clustering-like algorithms can be used to discover meaningful latent coalitions from real preference ranking datasets and to learn the structure of hierarchically decomposable models based on riffled independence.