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 Statistical Learning


Anisotropic oracle inequalities in noisy quantization

arXiv.org Machine Learning

The effect of errors in variables in quantization is investigated. We prove general exact and non-exact oracle inequalities with fast rates for an empirical minimization based on a noisy sample $Z_i=X_i+\epsilon_i,i=1,\ldots,n$, where $X_i$ are i.i.d. with density $f$ and $\epsilon_i$ are i.i.d. with density $\eta$. These rates depend on the geometry of the density $f$ and the asymptotic behaviour of the characteristic function of $\eta$. This general study can be applied to the problem of $k$-means clustering with noisy data. For this purpose, we introduce a deconvolution $k$-means stochastic minimization which reaches fast rates of convergence under standard Pollard's regularity assumptions.


Feature Selection Based on Term Frequency and T-Test for Text Categorization

arXiv.org Machine Learning

Much work has been done on feature selection. Existing methods are based on document frequency, such as Chi-Square Statistic, Information Gain etc. However, these methods have two shortcomings: one is that they are not reliable for low-frequency terms, and the other is that they only count whether one term occurs in a document and ignore the term frequency. Actually, high-frequency terms within a specific category are often regards as discriminators. This paper focuses on how to construct the feature selection function based on term frequency, and proposes a new approach based on $t$-test, which is used to measure the diversity of the distributions of a term between the specific category and the entire corpus. Extensive comparative experiments on two text corpora using three classifiers show that our new approach is comparable to or or slightly better than the state-of-the-art feature selection methods (i.e., $\chi^2$, and IG) in terms of macro-$F_1$ and micro-$F_1$.


Inference in Kingman's Coalescent with Particle Markov Chain Monte Carlo Method

arXiv.org Machine Learning

We propose a new algorithm to do posterior sampling of Kingman's coalescent, based upon the Particle Markov Chain Monte Carlo methodology. Specifically, the algorithm is an instantiation of the Particle Gibbs Sampling method, which alternately samples coalescent times conditioned on coalescent tree structures, and tree structures conditioned on coalescent times via the conditional Sequential Monte Carlo procedure. We implement our algorithm as a C++ package, and demonstrate its utility via a parameter estimation task in population genetics on both single- and multiple-locus data. The experiment results show that the proposed algorithm performs comparable to or better than several well-developed methods.


Geometrical complexity of data approximators

arXiv.org Machine Learning

There are many methods developed to approximate a cloud of vectors embedded in high-dimensional space by simpler objects: starting from principal points and linear manifolds to self-organizing maps, neural gas, elastic maps, various types of principal curves and principal trees, and so on. For each type of approximators the measure of the approximator complexity was developed too. These measures are necessary to find the balance between accuracy and complexity and to define the optimal approximations of a given type. We propose a measure of complexity (geometrical complexity) which is applicable to approximators of several types and which allows comparing data approximations of different types.


An Improved EM algorithm

arXiv.org Artificial Intelligence

In this paper, we firstly give a brief introduction of expectation maximization (EM) algorithm, and then discuss the initial value sensitivity of expectation maximization algorithm. Subsequently, we give a short proof of EM's convergence. Then, we implement experiments with the expectation maximization algorithm (We implement all the experiments on Gaussion mixture model (GMM)). Our experiment with expectation maximization is performed in the following three cases: initialize randomly; initialize with result of K-means; initialize with result of K-medoids. The experiment result shows that expectation maximization algorithm depend on its initial state or parameters. And we found that EM initialized with K-medoids performed better than both the one initialized with K-means and the one initialized randomly.


Model Selection for High-Dimensional Regression under the Generalized Irrepresentability Condition

arXiv.org Machine Learning

In the high-dimensional regression model a response variable is linearly related to $p$ covariates, but the sample size $n$ is smaller than $p$. We assume that only a small subset of covariates is `active' (i.e., the corresponding coefficients are non-zero), and consider the model-selection problem of identifying the active covariates. A popular approach is to estimate the regression coefficients through the Lasso ($\ell_1$-regularized least squares). This is known to correctly identify the active set only if the irrelevant covariates are roughly orthogonal to the relevant ones, as quantified through the so called `irrepresentability' condition. In this paper we study the `Gauss-Lasso' selector, a simple two-stage method that first solves the Lasso, and then performs ordinary least squares restricted to the Lasso active set. We formulate `generalized irrepresentability condition' (GIC), an assumption that is substantially weaker than irrepresentability. We prove that, under GIC, the Gauss-Lasso correctly recovers the active set.


Sparse/Robust Estimation and Kalman Smoothing with Nonsmooth Log-Concave Densities: Modeling, Computation, and Theory

arXiv.org Machine Learning

We introduce a class of quadratic support (QS) functions, many of which play a crucial role in a variety of applications, including machine learning, robust statistical inference, sparsity promotion, and Kalman smoothing. Well known examples include the l2, Huber, l1 and Vapnik losses. We build on a dual representation for QS functions using convex analysis, revealing the structure necessary for a QS function to be interpreted as the negative log of a probability density, and providing the foundation for statistical interpretation and analysis of QS loss functions. For a subclass of QS functions called piecewise linear quadratic (PLQ) penalties, we also develop efficient numerical estimation schemes. These components form a flexible statistical modeling framework for a variety of learning applications, together with a toolbox of efficient numerical methods for inference. In particular, for PLQ densities, interior point (IP) methods can be used. IP methods solve nonsmooth optimization problems by working directly with smooth systems of equations characterizing their optimality. The efficiency of the IP approach depends on the structure of particular applications. We consider the class of dynamic inverse problems using Kalman smoothing, where the aim is to reconstruct the state of a dynamical system with known process and measurement models starting from noisy output samples. In the classical case, Gaussian errors are assumed in the process and measurement models. The extended framework allows arbitrary PLQ densities to be used, and the proposed IP approach solves the generalized Kalman smoothing problem while maintaining the linear complexity in the size of the time series, just as in the Gaussian case. This extends the computational efficiency of classic algorithms to a much broader nonsmooth setting, and includes many recently proposed robust and sparse smoothers as special cases.


Tensor Decompositions: A New Concept in Brain Data Analysis?

arXiv.org Machine Learning

Matrix factorizations and their extensions to tensor factorizations and decompositions have become prominent techniques for linear and multilinear blind source separation (BSS), especially multiway Independent Component Analysis (ICA), NonnegativeMatrix and Tensor Factorization (NMF/NTF), Smooth Component Analysis (SmoCA) and Sparse Component Analysis (SCA). Moreover, tensor decompositions have many other potential applications beyond multilinear BSS, especially feature extraction, classification, dimensionality reduction and multiway clustering. In this paper, we briefly overview new and emerging models and approaches for tensor decompositions in applications to group and linked multiway BSS/ICA, feature extraction, classification andMultiway Partial Least Squares (MPLS) regression problems. Keywords: Multilinear BSS, linked multiway BSS/ICA, tensor factorizations and decompositions, constrained Tucker and CP models, Penalized Tensor Decompositions (PTD), feature extraction, classification, multiway PLS and CCA.


Mixed LICORS: A Nonparametric Algorithm for Predictive State Reconstruction

arXiv.org Machine Learning

We introduce 'mixed LICORS', an algorithm for learning nonlinear, high-dimensional dynamics from spatio-temporal data, suitable for both prediction and simulation. Mixed LICORS extends the recent LICORS algorithm (Goerg and Shalizi, 2012) from hard clustering of predictive distributions to a non-parametric, EM-like soft clustering. This retains the asymptotic predictive optimality of LICORS, but, as we show in simulations, greatly improves out-of-sample forecasts with limited data. The new method is implemented in the publicly-available R package "LICORS" (http://cran.r-project.org/web/packages/LICORS/).


Semi-Supervised Information-Maximization Clustering

arXiv.org Machine Learning

Semi-supervised clustering aims to introduce prior knowledge in the decision process of a clustering algorithm. In this paper, we propose a novel semi-supervised clustering algorithm based on the information-maximization principle. The proposed method is an extension of a previous unsupervised information-maximization clustering algorithm based on squared-loss mutual information to effectively incorporate must-links and cannot-links. The proposed method is computationally efficient because the clustering solution can be obtained analytically via eigendecomposition. Furthermore, the proposed method allows systematic optimization of tuning parameters such as the kernel width, given the degree of belief in the must-links and cannot-links. The usefulness of the proposed method is demonstrated through experiments.