Statistical Learning
Anytime Hierarchical Clustering
Arslan, Omur, Koditschek, Daniel E.
We propose a new anytime hierarchical clustering method that iteratively transforms an arbitrary initial hierarchy on the configuration of measurements along a sequence of trees we prove for a fixed data set must terminate in a chain of nested partitions that satisfies a natural homogeneity requirement. Each recursive step re-edits the tree so as to improve a local measure of cluster homogeneity that is compatible with a number of commonly used (e.g., single, average, complete) linkage functions. As an alternative to the standard batch algorithms, we present numerical evidence to suggest that appropriate adaptations of this method can yield decentralized, scalable algorithms suitable for distributed/parallel computation of clustering hierarchies and online tracking of clustering trees applicable to large, dynamically changing databases and anomaly detection.
Active Learning for Undirected Graphical Model Selection
Vats, Divyanshu, Nowak, Robert D., Baraniuk, Richard G.
This paper studies graphical model selection, i.e., the problem of estimating a graph of statistical relationships among a collection of random variables. Conventional graphical model selection algorithms are passive, i.e., they require all the measurements to have been collected before processing begins. We propose an active learning algorithm that uses junction tree representations to adapt future measurements based on the information gathered from prior measurements. We prove that, under certain conditions, our active learning algorithm requires fewer scalar measurements than any passive algorithm to reliably estimate a graph. A range of numerical results validate our theory and demonstrates the benefits of active learning.
Estimating nonlinear regression errors without doing regression
A method for estimating nonlinear regression errors and their distributions without performing regression is presented. Assuming continuity of the modeling function the variance is given in terms of conditional probabilities extracted from the data. For N data points the computational demand is N2. Comparing the predicted residual errors with those derived from a linear model assumption provides a signal for nonlinearity. The method is successfully illustrated with data generated by the Ikeda and Lorenz maps augmented with noise. As a by-product the embedding dimensions of these maps are also extracted.
Supersparse Linear Integer Models for Interpretable Classification
Ustun, Berk, Tracร , Stefano, Rudin, Cynthia
Scoring systems are classification models that only require users to add, subtract and multiply a few meaningful numbers to make a prediction. These models are often used because they are practical and interpretable. In this paper, we introduce an off-the-shelf tool to create scoring systems that both accurate and interpretable, known as a Supersparse Linear Integer Model (SLIM). SLIM is a discrete optimization problem that minimizes the 0-1 loss to encourage a high level of accuracy, regularizes the L0-norm to encourage a high level of sparsity, and constrains coefficients to a set of interpretable values. We illustrate the practical and interpretable nature of SLIM scoring systems through applications in medicine and criminology, and show that they are are accurate and sparse in comparison to state-of-the-art classification models using numerical experiments.
A Naive Bayes machine learning approach to risk prediction using censored, time-to-event data
Wolfson, Julian, Bandyopadhyay, Sunayan, Elidrisi, Mohamed, Vazquez-Benitez, Gabriela, Musgrove, Donald, Adomavicius, Gediminas, Johnson, Paul, O'Connor, Patrick
Predicting an individual's risk of experiencing a future clinical outcome is a statistical task with important consequences for both practicing clinicians and public health experts. Modern observational databases such as electronic health records (EHRs) provide an alternative to the longitudinal cohort studies traditionally used to construct risk models, bringing with them both opportunities and challenges. Large sample sizes and detailed covariate histories enable the use of sophisticated machine learning techniques to uncover complex associations and interactions, but observational databases are often ``messy,'' with high levels of missing data and incomplete patient follow-up. In this paper, we propose an adaptation of the well-known Naive Bayes (NB) machine learning approach for classification to time-to-event outcomes subject to censoring. We compare the predictive performance of our method to the Cox proportional hazards model which is commonly used for risk prediction in healthcare populations, and illustrate its application to prediction of cardiovascular risk using an EHR dataset from a large Midwest integrated healthcare system.
A Permutation Approach for Selecting the Penalty Parameter in Penalized Model Selection
Sabourin, Jeremy, Valdar, William, Nobel, Andrew
We describe a simple, efficient, permutation based procedure for selecting the penalty parameter in the LASSO. The procedure, which is intended for applications where variable selection is the primary focus, can be applied in a variety of structural settings, including generalized linear models. We briefly discuss connections between permutation selection and existing theory for the LASSO. In addition, we present a simulation study and an analysis of three real data sets in which permutation selection is compared with cross-validation (CV), the Bayesian information criterion (BIC), and a selection method based on recently developed testing procedures for the LASSO.
Minimum $n$-Rank Approximation via Iterative Hard Thresholding
Zhang, Min, Yang, Lei, Huang, Zheng-Hai
The problem of recovering a low $n$-rank tensor is an extension of sparse recovery problem from the low dimensional space (matrix space) to the high dimensional space (tensor space) and has many applications in computer vision and graphics such as image inpainting and video inpainting. In this paper, we consider a new tensor recovery model, named as minimum $n$-rank approximation (MnRA), and propose an appropriate iterative hard thresholding algorithm with giving the upper bound of the $n$-rank in advance. The convergence analysis of the proposed algorithm is also presented. Particularly, we show that for the noiseless case, the linear convergence with rate $\frac{1}{2}$ can be obtained for the proposed algorithm under proper conditions. Additionally, combining an effective heuristic for determining $n$-rank, we can also apply the proposed algorithm to solve MnRA when $n$-rank is unknown in advance. Some preliminary numerical results on randomly generated and real low $n$-rank tensor completion problems are reported, which show the efficiency of the proposed algorithms.
Power System Parameters Forecasting Using Hilbert-Huang Transform and Machine Learning
Kurbatsky, Victor, Tomin, Nikita, Spiryaev, Vadim, Leahy, Paul, Sidorov, Denis, Zhukov, Alexei
A novel hybrid data-driven approach is developed for forecasting power system parameters with the goal of increasing the efficiency of short-term forecasting studies for non-stationary time-series. The proposed approach is based on mode decomposition and a feature analysis of initial retrospective data using the Hilbert-Huang transform and machine learning algorithms. The random forests and gradient boosting trees learning techniques were examined. The decision tree techniques were used to rank the importance of variables employed in the forecasting models. The Mean Decrease Gini index is employed as an impurity function. The resulting hybrid forecasting models employ the radial basis function neural network and support vector regression. Apart from introduction and references the paper is organized as follows. The section 2 presents the background and the review of several approaches for short-term forecasting of power system parameters. In the third section a hybrid machine learning-based algorithm using Hilbert-Huang transform is developed for short-term forecasting of power system parameters. Fourth section describes the decision tree learning algorithms used for the issue of variables importance. Finally in section six the experimental results in the following electric power problems are presented: active power flow forecasting, electricity price forecasting and for the wind speed and direction forecasting.
Pseudo-Marginal Bayesian Inference for Gaussian Processes
Filippone, Maurizio, Girolami, Mark
The main challenges that arise when adopting Gaussian Process priors in probabilistic modeling are how to carry out exact Bayesian inference and how to account for uncertainty on model parameters when making model-based predictions on out-of-sample data. Using probit regression as an illustrative working example, this paper presents a general and effective methodology based on the pseudo-marginal approach to Markov chain Monte Carlo that efficiently addresses both of these issues. The results presented in this paper show improvements over existing sampling methods to simulate from the posterior distribution over the parameters defining the covariance function of the Gaussian Process prior. This is particularly important as it offers a powerful tool to carry out full Bayesian inference of Gaussian Process based hierarchic statistical models in general. The results also demonstrate that Monte Carlo based integration of all model parameters is actually feasible in this class of models providing a superior quantification of uncertainty in predictions. Extensive comparisons with respect to state-of-the-art probabilistic classifiers confirm this assertion.
Probabilistic Archetypal Analysis
Seth, Sohan, Eugster, Manuel J. A.
Archetypal analysis represents a set of observations as convex combinations of pure patterns, or archetypes. The original geometric formulation of finding archetypes by approximating the convex hull of the observations assumes them to be real valued. This, unfortunately, is not compatible with many practical situations. In this paper we revisit archetypal analysis from the basic principles, and propose a probabilistic framework that accommodates other observation types such as integers, binary, and probability vectors. We corroborate the proposed methodology with convincing real-world applications on finding archetypal winter tourists based on binary survey data, archetypal disaster-affected countries based on disaster count data, and document archetypes based on term-frequency data. We also present an appropriate visualization tool to summarize archetypal analysis solution better.