Statistical Learning
A mixture Cox-Logistic model for feature selection from survival and classification data
Branders, Samuel, D'Ambrosio, Roberto, Dupont, Pierre
This paper presents an original approach for jointly fitting survival times and classifying samples into subgroups. The Coxlogit model is a generalized linear model with a common set of selected features for both tasks. Survival times and class labels are here assumed to be conditioned by a common risk score which depends on those features. Learning is then naturally expressed as maximizing the joint probability of subgroup labels and the ordering of survival events, conditioned to a common weight vector. The model is estimated by minimizing a regularized log-likelihood through a coordinate descent algorithm. Validation on synthetic and breast cancer data shows that the proposed approach outperforms a standard Cox model or logistic regression when both predicting the survival times and classifying new samples into subgroups. It is also better at selecting informative features for both tasks.
A PARTAN-Accelerated Frank-Wolfe Algorithm for Large-Scale SVM Classification
Frandi, Emanuele, Nanculef, Ricardo, Suykens, Johan A. K.
Frank-Wolfe algorithms have recently regained the attention of the Machine Learning community. Their solid theoretical properties and sparsity guarantees make them a suitable choice for a wide range of problems in this field. In addition, several variants of the basic procedure exist that improve its theoretical properties and practical performance. In this paper, we investigate the application of some of these techniques to Machine Learning, focusing in particular on a Parallel Tangent (PARTAN) variant of the FW algorithm that has not been previously suggested or studied for this type of problems. We provide experiments both in a standard setting and using a stochastic speed-up technique, showing that the considered algorithms obtain promising results on several medium and large-scale benchmark datasets for SVM classification.
Multiscale Event Detection in Social Media
Dong, Xiaowen, Mavroeidis, Dimitrios, Calabrese, Francesco, Frossard, Pascal
Event detection has been one of the most important research topics in social media analysis. Most of the traditional approaches detect events based on fixed temporal and spatial resolutions, while in reality events of different scales usually occur simultaneously, namely, they span different intervals in time and space. In this paper, we propose a novel approach towards multiscale event detection using social media data, which takes into account different temporal and spatial scales of events in the data. Specifically, we explore the properties of the wavelet transform, which is a well-developed multiscale transform in signal processing, to enable automatic handling of the interaction between temporal and spatial scales. We then propose a novel algorithm to compute a data similarity graph at appropriate scales and detect events of different scales simultaneously by a single graph-based clustering process. Furthermore, we present spatiotemporal statistical analysis of the noisy information present in the data stream, which allows us to define a novel term-filtering procedure for the proposed event detection algorithm and helps us study its behavior using simulated noisy data. Experimental results on both synthetically generated data and real world data collected from Twitter demonstrate the meaningfulness and effectiveness of the proposed approach. Our framework further extends to numerous application domains that involve multiscale and multiresolution data analysis.
Mesh Learning for Classifying Cognitive Processes
Ozay, Mete, รztekin, Ilke, รztekin, Uygar, Vural, Fatos T. Yarman
A relatively recent advance in cognitive neuroscience has been multi-voxel pattern analysis (MVPA), which enables researchers to decode brain states and/or the type of information represented in the brain during a cognitive operation. MVPA methods utilize machine learning algorithms to distinguish among types of information or cognitive states represented in the brain, based on distributed patterns of neural activity. In the current investigation, we propose a new approach for representation of neural data for pattern analysis, namely a Mesh Learning Model. In this approach, at each time instant, a star mesh is formed around each voxel, such that the voxel corresponding to the center node is surrounded by its p-nearest neighbors. The arc weights of each mesh are estimated from the voxel intensity values by least squares method. The estimated arc weights of all the meshes, called Mesh Arc Descriptors (MADs), are then used to train a classifier, such as Neural Networks, k-Nearest Neighbor, Na\"ive Bayes and Support Vector Machines. The proposed Mesh Model was tested on neuroimaging data acquired via functional magnetic resonance imaging (fMRI) during a recognition memory experiment using categorized word lists, employing a previously established experimental paradigm (\"Oztekin & Badre, 2011). Results suggest that the proposed Mesh Learning approach can provide an effective algorithm for pattern analysis of brain activity during cognitive processing.
Learning Local Invariant Mahalanobis Distances
For many tasks and data types, there are natural transformations to which the data should be invariant or insensitive. For instance, in visual recognition, natural images should be insensitive to rotation and translation. This requirement and its implications have been important in many machine learning applications, and tolerance for image transformations was primarily achieved by using robust feature vectors. In this paper we propose a novel and computationally efficient way to learn a local Mahalanobis metric per datum, and show how we can learn a local invariant metric to any transformation in order to improve performance.
Learning Planar Ising Models
Johnson, Jason K., Oyen, Diane, Chertkov, Michael, Netrapalli, Praneeth
Inference and learning of graphical models are both well-studied problems in statistics and machine learning that have found many applications in science and engineering. However, exact inference is intractable in general graphical models, which suggests the problem of seeking the best approximation to a collection of random variables within some tractable family of graphical models. In this paper, we focus on the class of planar Ising models, for which exact inference is tractable using techniques of statistical physics. Based on these techniques and recent methods for planarity testing and planar embedding, we propose a simple greedy algorithm for learning the best planar Ising model to approximate an arbitrary collection of binary random variables (possibly from sample data). Given the set of all pairwise correlations among variables, we select a planar graph and optimal planar Ising model defined on this graph to best approximate that set of correlations. We demonstrate our method in simulations and for the application of modeling senate voting records.
A scaled gradient projection method for Bayesian learning in dynamical systems
Bonettini, Silvia, Chiuso, Alessandro, Prato, Marco
A crucial task in system identification problems is the selection of the most appropriate model class, and is classically addressed resorting to cross-validation or using asymptotic arguments. As recently suggested in the literature, this can be addressed in a Bayesian framework, where model complexity is regulated by few hyperparameters, which can be estimated via marginal likelihood maximization. It is thus of primary importance to design effective optimization methods to solve the corresponding optimization problem. If the unknown impulse response is modeled as a Gaussian process with a suitable kernel, the maximization of the marginal likelihood leads to a challenging nonconvex optimization problem, which requires a stable and effective solution strategy. In this paper we address this problem by means of a scaled gradient projection algorithm, in which the scaling matrix and the steplength parameter play a crucial role to provide a meaning solution in a computational time comparable with second order methods. In particular, we propose both a generalization of the split gradient approach to design the scaling matrix in the presence of box constraints, and an effective implementation of the gradient and objective function. The extensive numerical experiments carried out on several test problems show that our method is very effective in providing in few tenths of a second solutions of the problems with accuracy comparable with state-of-the-art approaches. Moreover, the flexibility of the proposed strategy makes it easily adaptable to a wider range of problems arising in different areas of machine learning, signal processing and system identification.
Feature selection for classification with class-separability strategy and data envelopment analysis
Zhang, Yishi, Yang, Chao, Yang, Anrong, Xiong, Chan, Zhou, Xingchi, Zhang, Zigang
In this paper, a novel feature selection method is presented, which is based on Class-Separability (CS) strategy and Data Envelopment Analysis (DEA). To better capture the relationship between features and the class, class labels are separated into individual variables and relevance and redundancy are explicitly handled on each class label. Super-efficiency DEA is employed to evaluate and rank features via their conditional dependence scores on all class labels, and the feature with maximum super-efficiency score is then added in the conditioning set for conditional dependence estimation in the next iteration, in such a way as to iteratively select features and get the final selected features. Eventually, experiments are conducted to evaluate the effectiveness of proposed method comparing with four state-of-the-art methods from the viewpoint of classification accuracy. Empirical results verify the feasibility and the superiority of proposed feature selection method. Keywords: Feature selection, classification, class-separability strategy, data envelopment analysis, super-efficiency 1. Introduction The explosion of large datasets in many fields poses unprecedented challenges to pattern recognition and data mining. Not only is the scale of samples getting larger, but also new types of data become prevalent. For example, tremendous new computer and Internet applications generate large amounts of types of data at an exponential rate in the world. It is thus realized that feature selection is an indispensable component [1]. Feature selection is a process of selecting a subset of original features according to certain criteria. It is an important and frequently used technique for dimension reduction.
Feature Selection with Redundancy-complementariness Dispersion
Chen, Zhijun, Wu, Chaozhong, Zhang, Yishi, Huang, Zhen, Ran, Bin, Zhong, Ming, Lyu, Nengchao
Feature selection has attracted significant attention in data mining and machine learning in the past decades. Many existing feature selection methods eliminate redundancy by measuring pairwise inter-correlation of features, whereas the complementariness of features and higher inter-correlation among more than two features are ignored. In this study, a modification item concerning the complementariness of features is introduced in the evaluation criterion of features. Additionally, in order to identify the interference effect of already-selected False Positives (FPs), the redundancy-complementariness dispersion is also taken into account to adjust the measurement of pairwise inter-correlation of features. To illustrate the effectiveness of proposed method, classification experiments are applied with four frequently used classifiers on ten datasets. Classification results verify the superiority of proposed method compared with five representative feature selection methods.
Incremental Majorization-Minimization Optimization with Application to Large-Scale Machine Learning
Majorization-minimization algorithms consist of successively minimizing a sequence of upper bounds of the objective function. These upper bounds are tight at the current estimate, and each iteration monotonically drives the objective function downhill. Such a simple principle is widely applicable and has been very popular in various scientific fields, especially in signal processing and statistics. In this paper, we propose an incremental majorization-minimization scheme for minimizing a large sum of continuous functions, a problem of utmost importance in machine learning. We present convergence guarantees for non-convex and convex optimization when the upper bounds approximate the objective up to a smooth error; we call such upper bounds "first-order surrogate functions". More precisely, we study asymptotic stationary point guarantees for non-convex problems, and for convex ones, we provide convergence rates for the expected objective function value. We apply our scheme to composite optimization and obtain a new incremental proximal gradient algorithm with linear convergence rate for strongly convex functions. In our experiments, we show that our method is competitive with the state of the art for solving machine learning problems such as logistic regression when the number of training samples is large enough, and we demonstrate its usefulness for sparse estimation with non-convex penalties.