A relatively recent advance in cognitive neuroscience has been multi-voxel pattern analysis (MVPA), which enables researchers to decode brain states and/or the type of information represented in the brain during a cognitive operation. MVPA methods utilize machine learning algorithms to distinguish among types of information or cognitive states represented in the brain, based on distributed patterns of neural activity. In the current investigation, we propose a new approach for representation of neural data for pattern analysis, namely a Mesh Learning Model. In this approach, at each time instant, a star mesh is formed around each voxel, such that the voxel corresponding to the center node is surrounded by its p-nearest neighbors. The arc weights of each mesh are estimated from the voxel intensity values by least squares method. The estimated arc weights of all the meshes, called Mesh Arc Descriptors (MADs), are then used to train a classifier, such as Neural Networks, k-Nearest Neighbor, Na\"ive Bayes and Support Vector Machines. The proposed Mesh Model was tested on neuroimaging data acquired via functional magnetic resonance imaging (fMRI) during a recognition memory experiment using categorized word lists, employing a previously established experimental paradigm (\"Oztekin & Badre, 2011). Results suggest that the proposed Mesh Learning approach can provide an effective algorithm for pattern analysis of brain activity during cognitive processing.

For many tasks and data types, there are natural transformations to which the data should be invariant or insensitive. For instance, in visual recognition, natural images should be insensitive to rotation and translation. This requirement and its implications have been important in many machine learning applications, and tolerance for image transformations was primarily achieved by using robust feature vectors. In this paper we propose a novel and computationally efficient way to learn a local Mahalanobis metric per datum, and show how we can learn a local invariant metric to any transformation in order to improve performance. Metric learning is a machine learning task which learns a distance metric d(x, y) between data points, based on data instances. As distances play an important role in many machine learning algorithms, e.g.

Inference and learning of graphical models are both well-studied problems in statistics and machine learning that have found many applications in science and engineering. However, exact inference is intractable in general graphical models, which suggests the problem of seeking the best approximation to a collection of random variables within some tractable family of graphical models. In this paper, we focus on the class of planar Ising models, for which exact inference is tractable using techniques of statistical physics. Based on these techniques and recent methods for planarity testing and planar embedding, we propose a simple greedy algorithm for learning the best planar Ising model to approximate an arbitrary collection of binary random variables (possibly from sample data). Given the set of all pairwise correlations among variables, we select a planar graph and optimal planar Ising model defined on this graph to best approximate that set of correlations. We demonstrate our method in simulations and for the application of modeling senate voting records.

A crucial task in system identification problems is the selection of the most appropriate model class, and is classically addressed resorting to cross-validation or using order selection criteria based on asymptotic arguments. As recently suggested in the literature, this can be addressed in a Bayesian framework, where model complexity is regulated by few hyperparameters, which can be estimated via marginal likelihood maximization. It is thus of primary importance to design effective optimization methods to solve the corresponding optimization problem. If the unknown impulse response is modeled as a Gaussian process with a suitable kernel, the maximization of the marginal likelihood leads to a challenging nonconvex optimization problem, which requires a stable and effective solution strategy. In this paper we address this problem by means of a scaled gradient projection algorithm, in which the scaling matrix and the steplength parameter play a crucial role to provide a meaningful solution in a computational time comparable with second order methods. In particular, we propose both a generalization of the split gradient approach to design the scaling matrix in the presence of box constraints, and an effective implementation of the gradient and objective function. The extensive numerical experiments carried out on several test problems show that our method is very effective in providing in few tenths of a second solutions of the problems with accuracy comparable with state-of-the-art approaches. Moreover, the flexibility of the proposed strategy makes it easily adaptable to a wider range of problems arising in different areas of machine learning, signal processing and system identification.

Feature selection has attracted significant attention in data mining and machine learning in the past decades. Many existing feature selection methods eliminate redundancy by measuring pairwise inter-correlation of features, whereas the complementariness of features and higher inter-correlation among more than two features are ignored. In this study, a modification item concerning the complementariness of features is introduced in the evaluation criterion of features. Additionally, in order to identify the interference effect of already-selected False Positives (FPs), the redundancy-complementariness dispersion is also taken into account to adjust the measurement of pairwise inter-correlation of features. To illustrate the effectiveness of proposed method, classification experiments are applied with four frequently used classifiers on ten datasets. Classification results verify the superiority of proposed method compared with five representative feature selection methods. Keywords: Classification, Feature selection, Relevance, Redundancy, Complementariness, Redundancy-complementariness dispersion 1. Introduction With the fast development of the world, the dimensional and size of data is fast-growing in most kinds of fields which challenge the data mining and machine learning techniques. Feature selection is an important and useful method that can effectively reduce the dimensionality of feature space while retaining a relatively high accuracy in representing the original data. The effects of feature selection [9] have been widely recognized for its abilities in facilitating data interpretation, reducing acquisition and storage requirements, increasing learning speeds, improving generalization performance, etc.

In this paper, a novel feature selection method is presented, which is based on Class-Separability (CS) strategy and Data Envelopment Analysis (DEA). To better capture the relationship between features and the class, class labels are separated into individual variables and relevance and redundancy are explicitly handled on each class label. Super-efficiency DEA is employed to evaluate and rank features via their conditional dependence scores on all class labels, and the feature with maximum super-efficiency score is then added in the conditioning set for conditional dependence estimation in the next iteration, in such a way as to iteratively select features and get the final selected features. Eventually, experiments are conducted to evaluate the effectiveness of proposed method comparing with four state-of-the-art methods from the viewpoint of classification accuracy. Empirical results verify the feasibility and the superiority of proposed feature selection method. Keywords: Feature selection, classification, class-separability strategy, data envelopment analysis, super-efficiency 1. Introduction The explosion of large datasets in many fields poses unprecedented challenges to pattern recognition and data mining. Not only is the scale of samples getting larger, but also new types of data become prevalent. For example, tremendous new computer and Internet applications generate large amounts of types of data at an exponential rate in the world. It is thus realized that feature selection is an indispensable component [1]. Feature selection is a process of selecting a subset of original features according to certain criteria. It is an important and frequently used technique for dimension reduction.

Majorization-minimization algorithms consist of successively minimizing a sequence of upper bounds of the objective function. These upper bounds are tight at the current estimate, and each iteration monotonically drives the objective function downhill. Such a simple principle is widely applicable and has been very popular in various scientific fields, especially in signal processing and statistics. In this paper, we propose an incremental majorization-minimization scheme for minimizing a large sum of continuous functions, a problem of utmost importance in machine learning. We present convergence guarantees for non-convex and convex optimization when the upper bounds approximate the objective up to a smooth error; we call such upper bounds "first-order surrogate functions". More precisely, we study asymptotic stationary point guarantees for non-convex problems, and for convex ones, we provide convergence rates for the expected objective function value. We apply our scheme to composite optimization and obtain a new incremental proximal gradient algorithm with linear convergence rate for strongly convex functions. In our experiments, we show that our method is competitive with the state of the art for solving machine learning problems such as logistic regression when the number of training samples is large enough, and we demonstrate its usefulness for sparse estimation with non-convex penalties.

As a technology to read brain states from measurable brain activities, brain decoding are widely applied in industries and medical sciences. In spite of high demands in these applications for a universal decoder that can be applied to all individuals simultaneously, large variation in brain activities across individuals has limited the scope of many studies to the development of individual-specific decoders. In this study, we used deep neural network (DNN), a nonlinear hierarchical model, to construct a subject-transfer decoder. Our decoder is the first successful DNN-based subject-transfer decoder. When applied to a large-scale functional magnetic resonance imaging (fMRI) database, our DNN-based decoder achieved higher decoding accuracy than other baseline methods, including support vector machine (SVM). In order to analyze the knowledge acquired by this decoder, we applied principal sensitivity analysis (PSA) to the decoder and visualized the discriminative features that are common to all subjects in the dataset. Our PSA successfully visualized the subject-independent features contributing to the subject-transferability of the trained decoder.

Identification of the influential clinical symptoms and laboratory features that help in the diagnosis of dengue fever in early phase of the illness would aid in designing effective public health management and virological surveillance strategies. Keeping this as our main objective we develop in this paper, a new computational intelligence based methodology that predicts the diagnosis in real time, minimizing the number of false positives and false negatives. Our methodology consists of three major components (i) a novel missing value imputation procedure that can be applied on any data set consisting of categorical (nominal) and/or numeric (real or integer) (ii) a wrapper based features selection method with genetic search for extracting a subset of most influential symptoms that can diagnose the illness and (iii) an alternating decision tree method that employs boosting for generating highly accurate decision rules. The predictive models developed using our methodology are found to be more accurate than the state-of-the-art methodologies used in the diagnosis of the dengue fever.

Binary Hashing is widely used for effective approximate nearest neighbors search. Even though various binary hashing methods have been proposed, very few methods are feasible for extremely high-dimensional features often used in visual tasks today. We propose a novel highly sparse linear hashing method based on pairwise rotations. The encoding cost of the proposed algorithm is $\mathrm{O}(n \log n)$ for n-dimensional features, whereas that of the existing state-of-the-art method is typically $\mathrm{O}(n^2)$. The proposed method is also remarkably faster in the learning phase. Along with the efficiency, the retrieval accuracy is comparable to or slightly outperforming the state-of-the-art. Pairwise rotations used in our method are formulated from an analytical study of the trade-off relationship between quantization error and entropy of binary codes. Although these hashing criteria are widely used in previous researches, its analytical behavior is rarely studied. All building blocks of our algorithm are based on the analytical solution, and it thus provides a fairly simple and efficient procedure.