Goto

Collaborating Authors

 Statistical Learning


Banded Matrix Operators for Gaussian Markov Models in the Automatic Differentiation Era

arXiv.org Machine Learning

These two limitations have been thoroughly Banded matrices can be used as precision studied over the past decades and several approaches matrices in several models including linear have been proposed to overcome them. The most popular state-space models, some Gaussian processes, method for reducing computational complexity is and Gaussian Markov random fields. The the sparse GP framework (Candela and Rasmussen, aim of the paper is to make modern inference 2005; Titsias, 2009), where computations are focussed methods (such as variational inference or on a set of "inducing variables", allowing a tradeoff gradient-based sampling) available for Gaussian between computational requirements and the accuracy models with banded precision.


Fused Lasso for Feature Selection using Structural Information

arXiv.org Machine Learning

Feature selection has been proven a powerful preprocessing step for high-dimensional data analysis. However, most state-of-the-art methods suffer from two major drawbacks. First, they usually overlook the structural correlation information between pairwise samples, which may encapsulate useful information for refining the performance of feature selection. Second, they usually consider candidate feature relevancy equivalent to selected feature relevancy, and some less relevant features may be misinterpreted as salient features. To overcome these issues, we propose a new fused lasso for feature selection using structural information. Our idea is based on converting the original vectorial features into structure-based feature graph representations to incorporate structural relationship between samples, and defining a new evaluation measure to compute the joint significance of pairwise feature combinations in relation to the target feature graph. Furthermore, we formulate the corresponding feature subset selection problem into a least square regression model associated with a fused lasso regularizer to simultaneously maximize the joint relevancy and minimize the redundancy of the selected features. To effectively solve the challenging optimization problem, an iterative algorithm is developed to identify the most discriminative features. Experiments demonstrate the effectiveness of the proposed approach.


A Feature Selection Based on Perturbation Theory

arXiv.org Machine Learning

Consider a supervised dataset $D=[A\mid \textbf{b}]$, where $\textbf{b}$ is the outcome column, rows of $D$ correspond to observations, and columns of $A$ are the features of the dataset. A central problem in machine learning and pattern recognition is to select the most important features from $D$ to be able to predict the outcome. In this paper, we provide a new feature selection method where we use perturbation theory to detect correlations between features. We solve $AX=\textbf{b}$ using the method of least squares and singular value decomposition of $A$. In practical applications, such as in bioinformatics, the number of rows of $A$ (observations) are much less than the number of columns of $A$ (features). So we are dealing with singular matrices with big condition numbers. Although it is known that the solutions of least square problems in singular case are very sensitive to perturbations in $A$, our novel approach in this paper is to prove that the correlations between features can be detected by applying perturbations to $A$. The effectiveness of our method is verified by performing a series of comparisons with conventional and novel feature selection methods in the literature. It is demonstrated that in most situations, our method chooses considerably less number of features while attaining or exceeding the accuracy of the other methods.


Learning Vertex Convolutional Networks for Graph Classification

arXiv.org Machine Learning

In this paper, we develop a new aligned vertex convolutional network model to learn multi-scale local-level vertex features for graph classification. Our idea is to transform the graphs of arbitrary sizes into fixed-sized aligned vertex grid structures, and define a new vertex convolution operation by adopting a set of fixed-sized one-dimensional convolution filters on the grid structure. We show that the proposed model not only integrates the precise structural correspondence information between graphs but also minimises the loss of structural information residing on local-level vertices. Experiments on standard graph datasets demonstrate the effectiveness of the proposed model.


A Fully-Automatic Framework for Parkinson's Disease Diagnosis by Multi-Modality Images

arXiv.org Machine Learning

Background: Parkinson's disease (PD) is a prevalent long-term neurodegenerative disease. Though the diagnostic criteria of PD are relatively well defined, the current medical imaging diagnostic procedures are expertise-demanding, and thus call for a higher-integrated AI-based diagnostic algorithm. Methods: In this paper, we proposed an automatic, end-to-end, multi-modality diagnosis framework, including segmentation, registration, feature generation and machine learning, to process the information of the striatum for the diagnosis of PD. Multiple modalities, including T1- weighted MRI and 11C-CFT PET, were used in the proposed framework. The reliability of this framework was then validated on a dataset from the PET center of Huashan Hospital, as the dataset contains paired T1-MRI and CFT-PET images of 18 Normal (NL) subjects and 49 PD subjects. Results: We obtained an accuracy of 100% for the PD/NL classification task, besides, we conducted several comparative experiments to validate the diagnosis ability of our framework. Conclusion: Through experiment we illustrate that (1) automatic segmentation has the same classification effect as the manual segmentation, (2) the multi-modality images generates a better prediction than single modality images, and (3) volume feature is shown to be irrelevant to PD diagnosis.


HexaGAN: Generative Adversarial Nets for Real World Classification

arXiv.org Machine Learning

Most deep learning classification studies assume clean data. However, dirty data is prevalent in real world, and this undermines the classification performance. The data we practically encounter has problems such as 1) missing data, 2) class imbalance, and 3) missing label. Preprocessing techniques assume one of these problems and mitigate it, but an algorithm that assumes all three problems and resolves them has not yet been proposed. Therefore, in this paper, we propose HexaGAN, a generative adversarial network (GAN) framework that shows good classification performance for all three problems. We interpret the three problems from a similar perspective to solve them jointly. To enable this, the framework consists of six components, which interact in an end-to-end manner. We also devise novel loss functions corresponding to the architecture. The designed loss functions achieve state-of-the-art imputation performance with up to a 14% improvement and high-quality class-conditional data. We evaluate the classification performance (F1-score) of the proposed method with 20% missingness and confirm up to a 5% improvement in comparison with the combinations of state-of-the-art methods.


Semi-Generative Modelling: Covariate-Shift Adaptation with Cause and Effect Features

arXiv.org Machine Learning

Current methods for covariate-shift adaptation use unlabelled data to compute importance weights or domain-invariant features, while the final model is trained on labelled data only. Here, we consider a particular case of covariate shift which allows us also to learn from unlabelled data, that is, combining adaptation with semi-supervised learning. Using ideas from causality, we argue that this requires learning with both causes, $X_C$, and effects, $X_E$, of a target variable, $Y$, and show how this setting leads to what we call a semi-generative model, $P(Y,X_E|X_C,\theta)$. Our approach is robust to domain shifts in the distribution of causal features and leverages unlabelled data by learning a direct map from causes to effects. Experiments on synthetic data demonstrate significant improvements in classification over purely-supervised and importance-weighting baselines.


Top 18 Free Training Resources for AI and Machine Learning Skills (Plus 3 Great Paid Ones, Too) -- Pure AI

#artificialintelligence

This book is available free in .PDF format via the link above, and the site offers links to all the lab code. Written by professors at USC, Stanford and the University of Washington and focused on R -- the language of statistical computing that is often used for machine learning and AI programs in this area -- the book has been described as "the'how to' manual for statistical learning." Once you're done with this book, move on to the authors' follow-up, " The Elements of Statistical Learning," also available for free online (although both can be purchased, as well).


The Anatomy of K-Means Clustering

#artificialintelligence

Let's say you want to classify hundreds (or thousands) of documents based on their content and topics, or you wish to group together different images for some reason. Or what's even more, let's think you have that same data already classified but you want to challenge that labeling. You want to know if that data categorization makes sense or not, or can be improved. Well, my advice is that you cluster your data. Information is often darkened by noise and redundancy, and grouping data into clusters (clustering) with similar features is an efficient way to bring some light on.


Asking Great Questions as a Data Scientist

#artificialintelligence

Asking questions can sometimes seem scary. No one wants to appear "silly." Data Science is a constant collaboration with the business and a series of questions and answers that allow you to deliver the analysis/model/data product that the business has in their head. Questions are required to fully understand what the business wants and not find yourself making assumptions about what others are thinking. Asking the right questions, like those you identified here is what separate Data Scientists that know'why' from folks that only know what (tools and technologies).