Statistical Learning
Formal derivation of Mesh Neural Networks with their Forward-Only gradient Propagation
Galatolo, Federico A., Cimino, Mario G. C. A., Vaglini, Gigliola
This paper proposes the Mesh Neural Network (MNN), a novel architecture which allows neurons to be connected in any topology, to efficiently route information. In MNNs, information is propagated between neurons throughout a state transition function. State and error gradients are then directly computed from state updates without backward computation. The MNN architecture and the error propagation schema is formalized and derived in tensor algebra. The proposed computational model can fully supply a gradient descent process, and is suitable for very large scale NNs, due to its expressivity and training efficiency, with respect to NNs based on back-propagation and computational graphs.
How to Decide Between Amazon SageMaker and Microsoft Azure Machine Learning Studio
But there are other tools that also claim to make machine learning easier and speed model development. I am wondering how they compare? So, this week, I am taking a look at Amazon SageMaker (SageMaker) and how it compares to Studio. What I found when I looked at SageMaker in comparison to Studio is a significantly different approach to model building. The vendors of each tool would both claim to offer a fully managed service that covers the entire machine learning workflow to build, train, and deploy machine learning models quickly.
How to Decide Between Amazon SageMaker and Microsoft Azure Machine Learning Studio
But there are other tools that also claim to make machine learning easier and speed model development. I am wondering how they compare? So, this week, I am taking a look at Amazon SageMaker (SageMaker) and how it compares to Studio. What I found when I looked at SageMaker in comparison to Studio is a significantly different approach to model building. The vendors of each tool would both claim to offer a fully managed service that covers the entire machine learning workflow to build, train, and deploy machine learning models quickly.
Enterprise AI: Diving into Machine Learning
Data in the real world, of course, isn't as simple as it is in the previous example. There are always complexities and nuances to data. To stick with our housing market example, the value of houses might also be influenced by dwelling type, lot size, recent upgrades, proximity to a neighborhood park and intangible variables like curbside appeal. And, in the real world, houses wouldn't all be in the same neighborhood, so your machine learning model must also consider the ZIP code for the property. To consider this wider range of variables, we need to dig deeper into the data scientist's toolbox and pull out some more sophisticated machine learning methods, including random forests and gradient boosting.
Disentangled Attribution Curves for Interpreting Random Forests and Boosted Trees
Devlin, Summer, Singh, Chandan, Murdoch, W. James, Yu, Bin
Tree ensembles, such as random forests and AdaBoost, are ubiquitous machine learning models known for achieving strong predictive performance across a wide variety of domains. However, this strong performance comes at the cost of interpretability (i.e. users are unable to understand the relationships a trained random forest has learned and why it is making its predictions). In particular, it is challenging to understand how the contribution of a particular feature, or group of features, varies as their value changes. To address this, we introduce Disentangled Attribution Curves (DAC), a method to provide interpretations of tree ensemble methods in the form of (multivariate) feature importance curves. For a given variable, or group of variables, DAC plots the importance of a variable(s) as their value changes. We validate DAC on real data by showing that the curves can be used to increase the accuracy of logistic regression while maintaining interpretability, by including DAC as an additional feature. In simulation studies, DAC is shown to out-perform competing methods in the recovery of conditional expectations. Finally, through a case-study on the bike-sharing dataset, we demonstrate the use of DAC to uncover novel insights into a dataset.
An Online Stochastic Kernel Machine for Robust Signal Classification
We present a novel variation of online kernel machines in Early work on the theoretical limits of online learning which we exploit a consensus based optimization mechanism were investigated from a statistical physics point of view [8]. to guide the evolution of decision functions drawn from a Though these techniques benchmark the performance of reproducing kernel Hilbert space (RKHS), which efficiently online algorithms in idealized scenarios they are of limited models the observed stationary process. We derive an practical value because they are based on specific parametric efficient classification algorithm based on these principles statistical models. Furthermore statistical physics based such that our algorithm reduces to traditional online kernel approaches typically require a priori knowledge of machines for the special case in which the consensus based parameters such as generalization error which are not optimization mechanism is switched off. We illustrate the knowable in practice. On the other hand the methods of algorithm's inherent resistance to label and input noise for the statistical learning theory provide greater insight into the case of online classification, and derive relevant regression behavior of online algorithms [9], particularly kernel based bounds. The resulting algorithm can find numerous algorithms in which we are particularly interested.
Quantitative Error Prediction of Medical Image Registration using Regression Forests
Sokooti, Hessam, Saygili, Gorkem, Glocker, Ben, Lelieveldt, Boudewijn P. F., Staring, Marius
Predicting registration error can be useful for evaluation of registration procedures, which is important for the adoption of registration techniques in the clinic. In addition, quantitative error prediction can be helpful in improving the registration quality. The task of predicting registration error is demanding due to the lack of a ground truth in medical images. This paper proposes a new automatic method to predict the registration error in a quantitative manner, and is applied to chest CT scans. A random regression forest is utilized to predict the registration error locally. The forest is built with features related to the transformation model and features related to the dissimilarity after registration. The forest is trained and tested using manually annotated corresponding points between pairs of chest CT scans in two experiments: SPREAD (trained and tested on SPREAD) and inter-database (including three databases SPREAD, DIR-Lab-4DCT and DIR-Lab-COPDgene). The results show that the mean absolute errors of regression are 1.07 $\pm$ 1.86 and 1.76 $\pm$ 2.59 mm for the SPREAD and inter-database experiment, respectively. The overall accuracy of classification in three classes (correct, poor and wrong registration) is 90.7% and 75.4%, for SPREAD and inter-database respectively. The good performance of the proposed method enables important applications such as automatic quality control in large-scale image analysis.
Gradient tree boosting with random output projections for multi-label classification and multi-output regression
Joly, Arnaud, Wehenkel, Louis, Geurts, Pierre
Multi-output supervised learning aims to model input-output relationships from observations of inputoutput pairs whenever the output space is a vector of random variables. Multi-output classification and regression tasks have numerous applications in domains ranging from biology to multimedia, and recent applications in this area correspond to very high dimensional output spaces (Agrawal et al, 2013; Dekel and Shamir, 2010). Classification and regression trees (Breiman et al, 1984) are popular supervised learning methods that provide state-of-the-art performance when exploited in the context of ensemble methods, namely Random forests (Breiman, 2001; Geurts et al, 2006) and Boosting (Freund and Schapire, 1997; Friedman, 2001). Classification and regression trees can obviously be exploited to handle multi-output problems. The most straightforward way to address multi-output tasks is to apply standard single output methods separately and independently on each output. Although simple, this method, called binary relevance (Tsoumakas et al, 2009) in multi-label classification or single target (Spyromitros-Xioufis et al, 2012) in multi-output regression is often suboptimal as it does not exploit potential correlations that might exist between the outputs. Tree ensemble methods have however been explicitely extended by several authors to the joint prediction of multiple outputs (e.g., Segal, 1992; Blockeel et al, 2000). These extensions build a single tree to predict all outputs at once. They adapt the score measure used to assess splits during the tree growth to take into account all outputs and label each tree leaf with a vector of values, one for each output.
Horseshoe priors
Regularization is a fascinating topic, that puzzles me for a long time. First introduced in a machine learning course as a given, it always raised a question why it works. Then I started uncover a connection of regularization to the statistical properties of the underlying model. Indeed, if we consider linear regression model, it is easy to show, that L2 regularization is equivalent to adding Gaussian noise to the input. In fact, the latter is preferred if we consider feature interactions (or we have to use a non-trivial Tikhonov Matrix, e.g.
Unsupervised Machine Learning for the Discovery of Latent Disease Clusters and Patient Subgroups Using Electronic Health Records
Wang, Yanshan, Zhao, Yiqing, Therneau, Terry M., Atkinson, Elizabeth J., Tafti, Ahmad P., Zhang, Nan, Amin, Shreyasee, Limper, Andrew H., Liu, Hongfang
Machine learning has become ubiquitous and a key technology on mining electronic health records (EHRs) for facilitating clinical research and practice. Unsupervised machine learning, as opposed to supervised learning, has shown promise in identifying novel patterns and relations from EHRs without using human created labels. In this paper, we investigate the application of unsupervised machine learning models in discovering latent disease clusters and patient subgroups based on EHRs. We utilized Latent Dirichlet Allocation (LDA), a generative probabilistic model, and proposed a novel model named Poisson Dirichlet Model (PDM), which extends the LDA approach using a Poisson distribution to model patients' disease diagnoses and to alleviate age and sex factors by considering both observed and expected observations. In the empirical experiments, we evaluated LDA and PDM on three patient cohorts with EHR data retrieved from the Rochester Epidemiology Project (REP), for the discovery of latent disease clusters and patient subgroups. We compared the effectiveness of LDA and PDM in identifying latent disease clusters through the visualization of disease representations learned by two approaches. We also tested the performance of LDA and PDM in differentiating patient subgroups through survival analysis, as well as statistical analysis. The experimental results show that the proposed PDM could effectively identify distinguished disease clusters by alleviating the impact of age and sex, and that LDA could stratify patients into more differentiable subgroups than PDM in terms of p-values. However, the subgroups discovered by PDM might imply the underlying patterns of diseases of greater interest in epidemiology research due to the alleviation of age and sex. Both unsupervised machine learning approaches could be leveraged to discover patient subgroups using EHRs but with different foci.