Statistical Learning
Locally Linear Image Structural Embedding for Image Structure Manifold Learning
Ghojogh, Benyamin, Karray, Fakhri, Crowley, Mark
Most of existing manifold learning methods rely on Mean Squared Error (MSE) or $\ell_2$ norm. However, for the problem of image quality assessment, these are not promising measure. In this paper, we introduce the concept of an image structure manifold which captures image structure features and discriminates image distortions. We propose a new manifold learning method, Locally Linear Image Structural Embedding (LLISE), and kernel LLISE for learning this manifold. The LLISE is inspired by Locally Linear Embedding (LLE) but uses SSIM rather than MSE. This paper builds a bridge between manifold learning and image fidelity assessment and it can open a new area for future investigations.
Principal Component Analysis Using Structural Similarity Index for Images
Ghojogh, Benyamin, Karray, Fakhri, Crowley, Mark
Despite the advances of deep learning in specific tasks using images, the principled assessment of image fidelity and similarity is still a critical ability to develop. As it has been shown that Mean Squared Error (MSE) is insufficient for this task, other measures have been developed with one of the most effective being Structural Similarity Index (SSIM). Such measures can be used for subspace learning but existing methods in machine learning, such as Principal Component Analysis (PCA), are based on Euclidean distance or MSE and thus cannot properly capture the structural features of images. In this paper, we define an image structure subspace which discriminates different types of image distortions. We propose Image Structural Component Analysis (ISCA) and also kernel ISCA by using SSIM, rather than Euclidean distance, in the formulation of PCA. This paper provides a bridge between image quality assessment and manifold learning opening a broad new area for future research.
Generalizing Psychological Similarity Spaces to Unseen Stimuli
Bechberger, Lucas, Kühnberger, Kai-Uwe
Generalizing Psychological Similarity Spaces to Unseen Stimuli Combining Multidimensional Scaling with Artificial Neural Networks Lucas Bechberger and Kai-Uwe Kühnberger Abstract The cognitive framework of conceptual spaces proposes to represent concepts as regions in psychological similarity spaces. These similarity spaces are typically obtained through multidimensional scaling (MDS), which converts human dissimilarity ratings for a fixed set of stimuli into a spatial representation. One can distinguish metric MDS (which assumes that the dissimilarity ratings are interval or ratio scaled) from nonmetric MDS (which only assumes an ordinal scale). In our first study, we show that despite its additional assumptions, metric MDS does not necessarily yield better solutions than nonmetric MDS. In this chapter, we furthermore propose to learn a mapping from raw stimuli into the similarity space using artificial neural networks (ANNs) in order to generalize the similarity space to unseen inputs. In our second study, we show that a linear regression from the activation vectors of a convolutional ANN to similarity spaces obtained by MDS can be successful and that the results are sensitive to the number of dimensions of the similarity space. 1 Introduction The cognitive framework of conceptual spaces [Gärdenfors, 2000] proposes a geometric representation of conceptual structures: Instances are represented as points and concepts are represented as regions in psychological similarity spaces. Based on this representation, one can explain a range of cognitive phenomena from oneshotLucas Bechberger Institute of Cognitive Science, Osnabrück University email: lucas.bechberger@ The research presented in this paper is an updated, corrected, and significantly extended version of research reported in [Bechberger and Kypridemou, 2018]. 1 arXiv:1908.09260v1 In principle, there are three ways of obtaining the dimensions of a conceptual space: If the domain of interest is well understood, one can manually define the dimensions and thus the overall similarity space. A second approach is based on machine learning algorithms for dimensionality reduction. For instance, unsupervised artificial neural networks (ANNs) such as autoencoders or self-organizing maps can be used to find a compressed representation for a given set of input stimuli. This task is typically solved by optimizing a mathematical error function which may be not satisfactory from a psychological point of view. A third way of obtaining the dimensions of a conceptual space is based on dissimilarity ratings obtained from human subjects. The technique of "multidimensional scaling" (MDS) takes as an input these pairwise dissimilarities as well as the desired number t of dimensions. It then represents each stimulus as a point in an t -dimensional space in such a way that the distances between points in this space reflect the dissimilarities of their corresponding stimuli.
Predicting the Long-Term Outcomes of Biologics in Psoriasis Patients Using Machine Learning
Emam, Sepideh, Du, Amy X., Surmanowicz, Philip, Thomsen, Simon F., Greiner, Russ, Gniadecki, Robert
Background. Real-world data show that approximately 50% of psoriasis patients treated with a biologic agent will discontinue the drug because of loss of efficacy. History of previous therapy with another biologic, female sex and obesity were identified as predictors of drug discontinuations, but their individual predictive value is low. Objectives. To determine whether machine learning algorithms can produce models that can accurately predict outcomes of biologic therapy in psoriasis on individual patient level. Results. All tested machine learning algorithms could accurately predict the risk of drug discontinuation and its cause (e.g. lack of efficacy vs adverse event). The learned generalized linear model achieved diagnostic accuracy of 82%, requiring under 2 seconds per patient using the psoriasis patients dataset. Input optimization analysis established a profile of a patient who has best chances of long-term treatment success: biologic-naive patient under 49 years, early-onset plaque psoriasis without psoriatic arthritis, weight < 100 kg, and moderate-to-severe psoriasis activity (DLQI $\geq$ 16; PASI $\geq$ 10). Moreover, a different generalized linear model is used to predict the length of treatment for each patient with mean absolute error (MAE) of 4.5 months. However Pearson Correlation Coefficient indicates 0.935 linear dependencies between the actual treatment lengths and predicted ones. Conclusions. Machine learning algorithms predict the risk of drug discontinuation and treatment duration with accuracy exceeding 80%, based on a small set of predictive variables. This approach can be used as a decision-making tool, communicating expected outcomes to the patient, and development of evidence-based guidelines.
What are Neural Networks made of?
The success of Deep Learning methods is not well understood, though various attempts at explaining it have been made, typically centered on properties of stochastic gradient descent. Even less clear is why certain neural network architectures perform better than others. We provide a potential opening with the hypothesis that neural network training is a form of Genetic Programming.
LightMC: A Dynamic and Efficient Multiclass Decomposition Algorithm
Liu, Ziyu, Ke, Guolin, Bian, Jiang, Liu, Tieyan
Multiclass decomposition splits a multiclass classification problem into a series of independent binary learners and recomposes them by combining their outputs to reconstruct the multiclass classification results. Three widely-used realizations of such decomposition methods are One-Versus-All (OVA), One-Versus-One (OVO), and Error-Correcting-Output-Code (ECOC). While OVA and OVO are quite simple, both of them assume all classes are orthogonal which neglect the latent correlation between classes in real-world. Error-Correcting-Output-Code (ECOC) based decomposition methods, on the other hand, are more preferable due to its integration of the correlation among classes. However, the performance of existing ECOC-based methods highly depends on the design of coding matrix and decoding strategy. Unfortunately, it is quite uncertain and time-consuming to discover an effective coding matrix with appropriate decoding strategy. To address this problem, we propose LightMC, an efficient dynamic multiclass decomposition algorithm. Instead of using fixed coding matrix and decoding strategy, LightMC uses a differentiable decoding strategy, which enables it to dynamically optimize the coding matrix and decoding strategy, toward increasing the overall accuracy of multiclass classification, via back propagation jointly with the training of base learners in an iterative way. Empirical experimental results on several public large-scale multiclass classification datasets have demonstrated the effectiveness of LightMC in terms of both good accuracy and high efficiency.
Bias, Variance, and Regularization in Linear Regression: Lasso, Ridge, and Elastic Net -- Differences and uses
Regression is an incredibly popular and common machine learning technique. Often the starting point in learning machine learning, linear regression is an intuitive algorithm for easy-to-understand problems. It can generally be used whenever you're trying to predict a continuous variable (a variable that can take any value in some numeric range), linear regressions and its relatives are often strong options, and are almost always the best place to start. This blog assumes a functional knowledge of ordinary least squares (OLS) linear regression. You can read more about OLS linear regression here, here, or here.
Minitab Cookbook - Programmer Books
Minitab has been a statistical package of choice across all numerous sectors of industry including education and finance. Correctly using Minitab's statistical tools is an essential part of good decision making and allows you to achieve your targeted results, while displaying fantastic charts and a powerful analysis will also communicate your results more effectively. "Minitab Cookbook" will take the mystery out of using Minitab and will simplify the steps to produce great results. This book will be hugely beneficial for anyone who knows what statistics or studies they want to run, but who is unsure about just what button to press or what option to select. In this book, you will learn how to use data from different sources and will be guided through the basics of graphs as well as the basics of hypothesis tests.
Using Contextual Information to Improve Blood Glucose Prediction
Akbari, Mohammad, Chunara, Rumi
Blood glucose value prediction is an important task in diabetes management. While it is reported that glucose concentration is sensitive to social context such as mood, physical activity, stress, diet, alongside the influence of diabetes pathologies, we need more research on data and methodologies to incorporate and evaluate signals about such temporal context into prediction models. Person-generated data sources, such as actively contributed surveys as well as passively mined data from social media offer opportunity to capture such context, however the self-reported nature and sparsity of such data mean that such data are noisier and less specific than physiological measures such as blood glucose values themselves. Therefore, here we propose a Gaussian Process model to both address these data challenges and combine blood glucose and latent feature representations of contextual data for a novel multi-signal blood glucose prediction task. We find this approach outperforms common methods for multi-variate data, as well as using the blood glucose values in isolation. Given a robust evaluation across two blood glucose datasets with different forms of contextual information, we conclude that multi-signal Gaussian Processes can improve blood glucose prediction by using contextual information and may provide a significant shift in blood glucose prediction research and practice.
Heterogeneous Relational Kernel Learning
Nguyen, Andre T., Raff, Edward
Recent work has developed Bayesian methods for the automatic statistical analysis and description of single time series as well as of homogeneous sets of time series data. We extend prior work to create an interpretable kernel embedding for heterogeneous time series. Our method adds practically no computational cost compared to prior results by leveraging previously discarded intermediate results. We show the practical utility of our method by leveraging the learned embeddings for clustering, pattern discovery, and anomaly detection. These applications are beyond the ability of prior relational kernel learning approaches.