Statistical Learning
Self-supervised Contrastive Attributed Graph Clustering
Xia, Wei, Gao, Quanxue, Yang, Ming, Gao, Xinbo
Attributed graph clustering, which learns node representation from node attribute and topological graph for clustering, is a fundamental but challenging task for graph analysis. Recently, methods based on graph contrastive learning (GCL) have obtained impressive clustering performance on this task. Yet, we observe that existing GCL-based methods 1) fail to benefit from imprecise clustering labels; 2) require a post-processing operation to get clustering labels; 3) cannot solve out-of-sample (OOS) problem. To address these issues, we propose a novel attributed graph clustering network, namely Self-supervised Contrastive Attributed Graph Clustering (SCAGC). In SCAGC, by leveraging inaccurate clustering labels, a self-supervised contrastive loss, which aims to maximize the similarities of intra-cluster nodes while minimizing the similarities of inter-cluster nodes, are designed for node representation learning. Meanwhile, a clustering module is built to directly output clustering labels by contrasting the representation of different clusters. Thus, for the OOS nodes, SCAGC can directly calculate their clustering labels. Extensive experimental results on four benchmark datasets have shown that SCAGC consistently outperforms 11 competitive clustering methods.
Machine Learning Algorithms In User Authentication Schemes
Pryor, Laura, Dave, Dr. Rushit, Seliya, Dr. Naeem, Boone, Dr. Evelyn R Sowells
In the past two decades, the number of mobile products being created by companies has grown exponentially. However, although these devices are constantly being upgraded with the newest features, the security measures used to protect these devices has stayed relatively the same over the past two decades. The vast difference in growth patterns between devices and their security is opening up the risk for more and more devices to easily become infiltrated by nefarious users. Working off of previous work in the field, this study looks at the different Machine Learning algorithms used in user authentication schemes involving touch dynamics and device movement. This study aims to give a comprehensive overview of the current uses of different machine learning algorithms that are frequently used in user authentication schemas involving touch dynamics and device movement. The benefits, limitations, and suggestions for future work will be thoroughly discussed throughout this paper.
Towards Understanding the Data Dependency of Mixup-style Training
Chidambaram, Muthu, Wang, Xiang, Hu, Yuzheng, Wu, Chenwei, Ge, Rong
In the Mixup training paradigm, a model is trained using convex combinations of data points and their associated labels. Despite seeing very few true data points during training, models trained using Mixup seem to still minimize the original empirical risk and exhibit better generalization and robustness on various tasks when compared to standard training. In this paper, we investigate how these benefits of Mixup training rely on properties of the data in the context of classification. For minimizing the original empirical risk, we compute a closed form for the Mixup-optimal classification, which allows us to construct a simple dataset on which minimizing the Mixup loss can provably lead to learning a classifier that does not minimize the empirical loss on the data. On the other hand, we also give sufficient conditions for Mixup training to also minimize the original empirical risk. For generalization, we characterize the margin of a Mixup classifier, and use this to understand why the decision boundary of a Mixup classifier can adapt better to the full structure of the training data when compared to standard training. In contrast, we also show that, for a large class of linear models and linearly separable datasets, Mixup training leads to learning the same classifier as standard training.
Compressibility of Distributed Document Representations
Contemporary natural language processing (NLP) revolves around learning from latent document representations, generated either implicitly by neural language models or explicitly by methods such as doc2vec or similar. One of the key properties of the obtained representations is their dimension. Whilst the commonly adopted dimensions of 256 and 768 offer sufficient performance on many tasks, it is many times unclear whether the default dimension is the most suitable choice for the subsequent downstream learning tasks. Furthermore, representation dimensions are seldom subject to hyperparameter tuning due to computational constraints. The purpose of this paper is to demonstrate that a surprisingly simple and efficient recursive compression procedure can be sufficient to both significantly compress the initial representation, but also potentially improve its performance when considering the task of text classification. Having smaller and less noisy representations is the desired property during deployment, as orders of magnitude smaller models can significantly reduce the computational overload and with it the deployment costs. We propose CoRe, a straightforward, representation learner-agnostic framework suitable for representation compression. The CoRe's performance is showcased and studied on a collection of 17 real-life corpora from biomedical, news, social media, and literary domains. We explored CoRe's behavior when considering contextual and non-contextual document representations, different compression levels, and 9 different compression algorithms. Current results based on more than 100,000 compression experiments indicate that recursive Singular Value Decomposition offers a very good trade-off between the compression efficiency and performance, making CoRe useful in many existing, representation-dependent NLP pipelines.
Towards Statistical and Computational Complexities of Polyak Step Size Gradient Descent
Ren, Tongzheng, Cui, Fuheng, Atsidakou, Alexia, Sanghavi, Sujay, Ho, Nhat
We study the statistical and computational complexities of the Polyak step size gradient descent algorithm under generalized smoothness and Lojasiewicz conditions of the population loss function, namely, the limit of the empirical loss function when the sample size goes to infinity, and the stability between the gradients of the empirical and population loss functions, namely, the polynomial growth on the concentration bound between the gradients of sample and population loss functions. We demonstrate that the Polyak step size gradient descent iterates reach a final statistical radius of convergence around the true parameter after logarithmic number of iterations in terms of the sample size. It is computationally cheaper than the polynomial number of iterations on the sample size of the fixed-step size gradient descent algorithm to reach the same final statistical radius when the population loss function is not locally strongly convex. Finally, we illustrate our general theory under three statistical examples: generalized linear model, mixture model, and mixed linear regression model.
Learning Mean-Field Equations from Particle Data Using WSINDy
Messenger, Daniel A., Bortz, David M.
We develop a weak-form sparse identification method for interacting particle systems (IPS) with the primary goals of reducing computational complexity for large particle number $N$ and offering robustness to either intrinsic or extrinsic noise. In particular, we use concepts from mean-field theory of IPS in combination with the weak-form sparse identification of nonlinear dynamics algorithm (WSINDy) to provide a fast and reliable system identification scheme for recovering the governing stochastic differential equations for an IPS when the number of particles per experiment $N$ is on the order of several thousand and the number of experiments $M$ is less than 100. This is in contrast to existing work showing that system identification for $N$ less than 100 and $M$ on the order of several thousand is feasible using strong-form methods. We prove that under some standard regularity assumptions the scheme converges with rate $\mathcal{O}(N^{-1/2})$ in the ordinary least squares setting and we demonstrate the convergence rate numerically on several systems in one and two spatial dimensions. Our examples include a canonical problem from homogenization theory (as a first step towards learning coarse-grained models), the dynamics of an attractive-repulsive swarm, and the IPS description of the parabolic-elliptic Keller-Segel model for chemotaxis.
Leveraging Spatial and Temporal Correlations in Sparsified Mean Estimation
Jhunjhunwala, Divyansh, Mallick, Ankur, Gadhikar, Advait, Kadhe, Swanand, Joshi, Gauri
We study the problem of estimating at a central server the mean of a set of vectors distributed across several nodes (one vector per node). When the vectors are high-dimensional, the communication cost of sending entire vectors may be prohibitive, and it may be imperative for them to use sparsification techniques. While most existing work on sparsified mean estimation is agnostic to the characteristics of the data vectors, in many practical applications such as federated learning, there may be spatial correlations (similarities in the vectors sent by different nodes) or temporal correlations (similarities in the data sent by a single node over different iterations of the algorithm) in the data vectors. We leverage these correlations by simply modifying the decoding method used by the server to estimate the mean. We provide an analysis of the resulting estimation error as well as experiments for PCA, K-Means and Logistic Regression, which show that our estimators consistently outperform more sophisticated and expensive sparsification methods.
Model-Change Active Learning in Graph-Based Semi-Supervised Learning
Miller, Kevin, Bertozzi, Andrea L.
Active learning in semi-supervised classification involves introducing additional labels for unlabelled data to improve the accuracy of the underlying classifier. A challenge is to identify which points to label to best improve performance while limiting the number of new labels. "Model-change" active learning quantifies the resulting change incurred in the classifier by introducing the additional label(s). We pair this idea with graph-based semi-supervised learning methods, that use the spectrum of the graph Laplacian matrix, which can be truncated to avoid prohibitively large computational and storage costs. We consider a family of convex loss functions for which the acquisition function can be efficiently approximated using the Laplace approximation of the posterior distribution. We show a variety of multiclass examples that illustrate improved performance over prior state-of-art.
Averting A Crisis In Simulation-Based Inference
Hermans, Joeri, Delaunoy, Arnaud, Rozet, François, Wehenkel, Antoine, Louppe, Gilles
We present extensive empirical evidence showing that current Bayesian simulation-based inference algorithms are inadequate for the falsificationist methodology of scientific inquiry. Our results collected through months of experimental computations show that all benchmarked algorithms -- (S)NPE, (S)NRE, SNL and variants of ABC -- may produce overconfident posterior approximations, which makes them demonstrably unreliable and dangerous if one's scientific goal is to constrain parameters of interest. We believe that failing to address this issue will lead to a well-founded trust crisis in simulation-based inference. For this reason, we argue that research efforts should now consider theoretical and methodological developments of conservative approximate inference algorithms and present research directions towards this objective. In this regard, we show empirical evidence that ensembles are consistently more reliable.
Predictive models of RNA degradation through dual crowdsourcing
Wayment-Steele, Hannah K., Kladwang, Wipapat, Watkins, Andrew M., Kim, Do Soon, Tunguz, Bojan, Reade, Walter, Demkin, Maggie, Romano, Jonathan, Wellington-Oguri, Roger, Nicol, John J., Gao, Jiayang, Onodera, Kazuki, Fujikawa, Kazuki, Mao, Hanfei, Vandewiele, Gilles, Tinti, Michele, Steenwinckel, Bram, Ito, Takuya, Noumi, Taiga, He, Shujun, Ishi, Keiichiro, Lee, Youhan, Öztürk, Fatih, Chiu, Anthony, Öztürk, Emin, Amer, Karim, Fares, Mohamed, Participants, Eterna, Das, Rhiju
Messenger RNA-based medicines hold immense potential, as evidenced by their rapid deployment as COVID-19 vaccines. However, worldwide distribution of mRNA molecules has been limited by their thermostability, which is fundamentally limited by the intrinsic instability of RNA molecules to a chemical degradation reaction called in-line hydrolysis. Predicting the degradation of an RNA molecule is a key task in designing more stable RNA-based therapeutics. Here, we describe a crowdsourced machine learning competition ("Stanford OpenVaccine") on Kaggle, involving single-nucleotide resolution measurements on 6043 102-130-nucleotide diverse RNA constructs that were themselves solicited through crowdsourcing on the RNA design platform Eterna. The entire experiment was completed in less than 6 months. Winning models demonstrated test set errors that were better by 50% than the previous state-of-the-art DegScore model. Furthermore, these models generalized to blindly predicting orthogonal degradation data on much longer mRNA molecules (504-1588 nucleotides) with improved accuracy over DegScore and other models. Top teams integrated natural language processing architectures and data augmentation techniques with predictions from previous dynamic programming models for RNA secondary structure. These results indicate that such models are capable of representing in-line hydrolysis with excellent accuracy, supporting their use for designing stabilized messenger RNAs. The integration of two crowdsourcing platforms, one for data set creation and another for machine learning, may be fruitful for other urgent problems that demand scientific discovery on rapid timescales.