In the realm of aerial image analysis, object detection plays a pivotal role, with significant implications for areas such as remote sensing, urban planning, and disaster management. This study addresses the inherent challenges in this domain, notably the detection of small objects, managing densely packed elements, and accounting for diverse orientations. We present an in-depth evaluation of an object detection model that integrates the Large Selective Kernel Network (LSKNet)as its backbone with the DiffusionDet head, utilizing the iSAID dataset for empirical analysis. Our approach encompasses the introduction of novel methodologies and extensive ablation studies. These studies critically assess various aspects such as loss functions, box regression techniques, and classification strategies to refine the model's precision in object detection. The paper details the experimental application of the LSKNet backbone in synergy with the DiffusionDet heads, a combination tailored to meet the specific challenges in aerial image object detection. The findings of this research indicate a substantial enhancement in the model's performance, especially in the accuracy-time tradeoff. The proposed model achieves a mean average precision (MAP) of approximately 45.7%, which is a significant improvement, outperforming the RCNN model by 4.7% on the same dataset. This advancement underscores the effectiveness of the proposed modifications and sets a new benchmark in aerial image analysis, paving the way for more accurate and efficient object detection methodologies. The code is publicly available at https://github.com/SashaMatsun/LSKDiffDet

Phylogenies depicting the evolutionary history of genetically heterogeneous subpopulations of cells from the same cancer i.e., cancer phylogenies, provide useful insights about cancer development and inform treatment. Cancer phylogenies can be reconstructed using data obtained from bulk DNA sequencing of multiple tissue samples from the same cancer. We introduce Orchard, a fast algorithm that reconstructs cancer phylogenies using point mutations detected in bulk DNA sequencing data. Orchard constructs cancer phylogenies progressively, one point mutation at a time, ultimately sampling complete phylogenies from a posterior distribution implied by the bulk DNA data. Orchard reconstructs more plausible phylogenies than state-of-the-art cancer phylogeny reconstruction methods on 90 simulated cancers and 14 B-progenitor acute lymphoblastic leukemias (B-ALLs). These results demonstrate that Orchard accurately reconstructs cancer phylogenies with up to 300 mutations. We then introduce a simple graph based clustering algorithm that uses a reconstructed phylogeny to infer unique groups of mutations i.e., mutation clusters, that characterize the genetic differences between cancer cell populations, and show that this approach is competitive with state-of-the-art mutation clustering methods.

This survey paper presents a brief overview of recent research on graph data augmentation and few-shot learning. It covers various techniques for graph data augmentation, including node and edge perturbation, graph coarsening, and graph generation, as well as the latest developments in few-shot learning, such as meta-learning and model-agnostic meta-learning. The paper explores these areas in depth and delves into further sub classifications. Rule based approaches and learning based approaches are surveyed under graph augmentation techniques. Few-Shot Learning on graphs is also studied in terms of metric learning techniques and optimization-based techniques. In all, this paper provides an extensive array of techniques that can be employed in solving graph processing problems faced in low-data scenarios.

Electronic Health Records (EHRs) are rich sources of patient-level data, including laboratory tests, medications, and diagnoses, offering valuable resources for medical data analysis. However, concerns about privacy often restrict access to EHRs, hindering downstream analysis. Researchers have explored various methods for generating privacy-preserving EHR data. In this study, we introduce a new method for generating diverse and realistic synthetic EHR time series data using Denoising Diffusion Probabilistic Models (DDPM). We conducted experiments on six datasets, comparing our proposed method with eight existing methods. Our results demonstrate that our approach significantly outperforms all existing methods in terms of data utility while requiring less training effort. Our approach also enhances downstream medical data analysis by providing diverse and realistic synthetic EHR data. The Electronic Health Record (EHR) is a digital version of the patient's medical history maintained by healthcare providers. It includes information such as demographic attributes, vital signals, and lab measurements that are sensitive in nature and important for clinical research. Researchers have been utilizing statistical and machine learning (ML) methods to analyze EHR for a variety of downstream tasks such as disease diagnosis, in-hospital mortality prediction, and disease phenotyping (Shickel et al., 2018; Goldstein et al., 2017). However, due to privacy concerns, EHR data is strictly regulated, and thus the availability of EHR data is often limited, creating barriers to the development of computational models in the field of healthcare.

While numerous defense methods have been proposed to prohibit potential poisoning attacks from untrusted data sources, most research works only defend against specific attacks, which leaves many avenues for an adversary to exploit. In this work, we propose an efficient and robust training approach to defend against data poisoning attacks based on influence functions, named Healthy Influential-Noise based Training. Using influence functions, we craft healthy noise that helps to harden the classification model against poisoning attacks without significantly affecting the generalization ability on test data. In addition, our method can perform effectively when only a subset of the training data is modified, instead of the current method of adding noise to all examples that has been used in several previous works. We conduct comprehensive evaluations over two image datasets with state-of-the-art poisoning attacks under different realistic attack scenarios. Our empirical results show that HINT can efficiently protect deep learning models against the effect of both untargeted and targeted poisoning attacks.

Counterfactual Explanations (CEs) are an important tool in Algorithmic Recourse for addressing two questions: 1. What are the crucial factors that led to an automated prediction/decision? 2. How can these factors be changed to achieve a more favorable outcome from a user's perspective? Thus, guiding the user's interaction with AI systems by proposing easy-to-understand explanations and easy-to-attain feasible changes is essential for the trustworthy adoption and long-term acceptance of AI systems. In the literature, various methods have been proposed to generate CEs, and different quality measures have been suggested to evaluate these methods. However, the generation of CEs is usually computationally expensive, and the resulting suggestions are unrealistic and thus non-actionable. In this paper, we introduce a new method to generate CEs for a pre-trained binary classifier by first shaping the latent space of an autoencoder to be a mixture of Gaussian distributions. CEs are then generated in latent space by linear interpolation between the query sample and the centroid of the target class. We show that our method maintains the characteristics of the input sample during the counterfactual search. In various experiments, we show that the proposed method is competitive based on different quality measures on image and tabular datasets -- efficiently returns results that are closer to the original data manifold compared to three state-of-the-art methods, which are essential for realistic high-dimensional machine learning applications.

In the era of the Internet of Things (IoT), where smartphones, built-in systems, wireless sensors, and nearly every smart device connect through local networks or the internet, billions of smart things communicate with each other and generate vast amounts of time-series data. As IoT time-series data is high-dimensional and high-frequency, time-series classification or regression has been a challenging issue in IoT. Recently, deep learning algorithms have demonstrated superior performance results in time-series data classification in many smart and intelligent IoT applications. However, it is hard to explore the hidden dynamic patterns and trends in time-series. Recent studies show that transforming IoT data into images improves the performance of the learning model. In this paper, we present a review of these studies which use image transformation/encoding techniques in IoT domain. We examine the studies according to their encoding techniques, data types, and application areas. Lastly, we emphasize the challenges and future dimensions of image transformation.

In recent years, graph neural networks (GNNs) have become a popular tool for solving various problems over graphs. In these models, the link structure of the graph is typically exploited and nodes' embeddings are iteratively updated based on adjacent nodes. Nodes' contents are used solely in the form of feature vectors, served as nodes' first-layer embeddings. However, the filters or convolutions, applied during iterations/layers to these initial embeddings lead to their impact diminish and contribute insignificantly to the final embeddings. In order to address this issue, in this paper we propose augmenting nodes' embeddings by embeddings generating from their content, at higher GNN layers. More precisely, we propose models wherein a structural embedding using a GNN and a content embedding are computed for each node. These two are combined using a combination layer to form the embedding of a node at a given layer. We suggest methods such as using an auto-encoder or building a content graph, to generate content embeddings. In the end, by conducting experiments over several real-world datasets, we demonstrate the high accuracy and performance of our models.

Recently, compositional optimization (CO) has gained popularity because of its applications in distributionally robust optimization (DRO) and many other machine learning problems. Large-scale and distributed availability of data demands the development of efficient federated learning (FL) algorithms for solving CO problems. Developing FL algorithms for CO is particularly challenging because of the compositional nature of the objective. Moreover, current state-of-the-art methods to solve such problems rely on large batch gradients (depending on the solution accuracy) not feasible for most practical settings. To address these challenges, in this work, we propose efficient FedAvg-type algorithms for solving non-convex CO in the FL setting. We first establish that vanilla FedAvg is not suitable to solve distributed CO problems because of the data heterogeneity in the compositional objective at each client which leads to the amplification of bias in the local compositional gradient estimates. To this end, we propose a novel FL framework FedDRO that utilizes the DRO problem structure to design a communication strategy that allows FedAvg to control the bias in the estimation of the compositional gradient. A key novelty of our work is to develop solution accuracy-independent algorithms that do not require large batch gradients (and function evaluations) for solving federated CO problems. We establish $\mathcal{O}(\epsilon^{-2})$ sample and $\mathcal{O}(\epsilon^{-3/2})$ communication complexity in the FL setting while achieving linear speedup with the number of clients. We corroborate our theoretical findings with empirical studies on large-scale DRO problems.

When engaging in strategic decision-making, we are frequently confronted with overwhelming information and data. The situation can be further complicated when certain pieces of evidence contradict each other or become paradoxical. The primary challenge is how to determine which information can be trusted when we adopt Artificial Intelligence (AI) systems for decision-making. This issue is known as deciding what to decide or Trustworthy AI. However, the AI system itself is often considered an opaque black box. We propose a new approach to address this issue by introducing a novel framework of Trustworthy AI (TAI) encompassing three crucial components of AI: representation space, loss function, and optimizer. Each component is loosely coupled with four TAI properties. Altogether, the framework consists of twelve TAI properties. We aim to use this framework to conduct the TAI experiments by quantitive and qualitative research methods to satisfy TAI properties for the decision-making context. The framework allows us to formulate an optimal prediction model trained by the given dataset for applying the strategic investment decision of credit default swaps (CDS) in the technology sector. Finally, we provide our view of the future direction of TAI research