Designing reward functions that guide generative molecular design (GMD) algorithms to desirable areas of chemical space is of critical importance in AI-driven drug discovery. Traditionally, this has been a manual and error-prone task; the selection of appropriate computational methods to approximate biological assays is challenging and the aggregation of computed values into a single score even more so, leading to potential reliance on trial-and-error approaches. We propose a novel approach for automated reward configuration that relies solely on experimental data, mitigating the challenges of manual reward adjustment on drug discovery projects. Our method achieves this by constructing a ranking over experimental data based on Pareto dominance over the multi-objective space, then training a neural network to approximate the reward function such that rankings determined by the predicted reward correlate with those determined by the Pareto dominance relation. We validate our method using two case studies. In the first study we simulate Design-Make-Test-Analyse (DMTA) cycles by alternating reward function updates and generative runs guided by that function. We show that the learned function adapts over time to yield compounds that score highly with respect to evaluation functions taken from the literature. In the second study we apply our algorithm to historical data from four real drug discovery projects. We show that our algorithm yields reward functions that outperform the predictive accuracy of human-defined functions, achieving an improvement of up to 0.4 in Spearman's correlation against a ground truth evaluation function that encodes the target drug profile for that project. Our method provides an efficient data-driven way to configure reward functions for GMD, and serves as a strong baseline for future research into transformative approaches for the automation of drug discovery.

Artificial Intelligence (AI) based image analysis has an immense potential to support diagnostic histopathology, including cancer diagnostics. However, developing supervised AI methods requires large-scale annotated datasets. A potentially powerful solution is to augment training data with synthetic data. Latent diffusion models, which can generate high-quality, diverse synthetic images, are promising. However, the most common implementations rely on detailed textual descriptions, which are not generally available in this domain. This work proposes a method that constructs structured textual prompts from automatically extracted image features. We experiment with the PCam dataset, composed of tissue patches only loosely annotated as healthy or cancerous. We show that including image-derived features in the prompt, as opposed to only healthy and cancerous labels, improves the Fr\'echet Inception Distance (FID) from 178.8 to 90.2. We also show that pathologists find it challenging to detect synthetic images, with a median sensitivity/specificity of 0.55/0.55. Finally, we show that synthetic data effectively trains AI models.

Continuous machine learning pipelines are common in industrial settings where models are periodically trained on data streams. Unfortunately, concept drifts may occur in data streams where the joint distribution of the data X and label y, P(X, y), changes over time and possibly degrade model accuracy. Existing concept drift adaptation approaches mostly focus on updating the model to the new data possibly using ensemble techniques of previous models and tend to discard the drifted historical data. However, we contend that explicitly utilizing the drifted data together leads to much better model accuracy and propose Quilt, a data-centric framework for identifying and selecting data segments that maximize model accuracy. To address the potential downside of efficiency, Quilt extends existing data subset selection techniques, which can be used to reduce the training data without compromising model accuracy. These techniques cannot be used as is because they only assume virtual drifts where the posterior probabilities P(y|X) are assumed not to change. In contrast, a key challenge in our setup is to also discard undesirable data segments with concept drifts. Quilt thus discards drifted data segments and selects data segment subsets holistically for accurate and efficient model training. The two operations use gradient-based scores, which have little computation overhead. In our experiments, we show that Quilt outperforms state-of-the-art drift adaptation and data selection baselines on synthetic and real datasets.

Recently, learning urban region representations utilizing multi-modal data (information views) has become increasingly popular, for deep understanding of the distributions of various socioeconomic features in cities. However, previous methods usually blend multi-view information in a posteriors stage, falling short in learning coherent and consistent representations across different views. In this paper, we form a new pipeline to learn consistent representations across varying views, and propose the multi-view Contrastive Prediction model for urban Region embedding (ReCP), which leverages the multiple information views from point-of-interest (POI) and human mobility data. Specifically, ReCP comprises two major modules, namely an intra-view learning module utilizing contrastive learning and feature reconstruction to capture the unique information from each single view, and inter-view learning module that perceives the consistency between the two views using a contrastive prediction learning scheme. We conduct thorough experiments on two downstream tasks to assess the proposed model, i.e., land use clustering and region popularity prediction. The experimental results demonstrate that our model outperforms state-of-the-art baseline methods significantly in urban region representation learning.

Modern machine learning techniques in the natural language processing domain can be used to automatically generate scripts for goal-oriented dialogue systems. The current article presents a general framework for studying the automatic generation of scripts for goal-oriented dialogue systems. A method for preprocessing dialog data sets in JSON format is described. A comparison is made of two methods for extracting user intent based on BERTopic and latent Dirichlet allocation. A comparison has been made of two implemented algorithms for classifying statements of users of a goal-oriented dialogue system based on logistic regression and BERT transformer models. The BERT transformer approach using the bert-base-uncased model showed better results for the three metrics Precision (0.80), F1-score (0.78) and Matthews correlation coefficient (0.74) in comparison with other methods.

Uplift modeling is widely used in performance marketing to estimate effects of promotion campaigns (e.g., increase of customer retention rate). Since it is impossible to observe outcomes of a recipient in treatment (e.g., receiving a certain promotion) and control (e.g., without promotion) groups simultaneously (i.e., counter-factual), uplift models are mainly trained on instances of treatment and control groups separately to form two models respectively, and uplifts are predicted by the difference of predictions from these two models (i.e., two-model method). When responses are noisy and the treatment effect is fractional, induced individual uplift predictions will be inaccurate, resulting in targeting undesirable customers. Though it is impossible to obtain the ideal ground-truth individual uplifts, known as Individual Treatment Effects (ITEs), alternatively, an average uplift of a group of users, called Average Treatment Effect (ATE), can be observed from experimental deliveries. Upon this, similar to Multiple Instance Learning (MIL) in which each training sample is a bag of instances, our framework sums up individual user uplift predictions for each bag of users as its bag-wise ATE prediction, and regularizes it to its ATE label, thus learning more accurate individual uplifts. Additionally, to amplify the fractional treatment effect, bags are composed of instances with adjacent individual uplift predictions, instead of random instances. Experiments conducted on two datasets show the effectiveness and universality of the proposed framework.

Hyperspectral image (HSI) clustering is gaining considerable attention owing to recent methods that overcome the inefficiency and misleading results from the absence of supervised information. Contrastive learning methods excel at existing pixel level and super pixel level HSI clustering tasks. The pixel-level contrastive learning method can effectively improve the ability of the model to capture fine features of HSI but requires a large time overhead. The super pixel-level contrastive learning method utilizes the homogeneity of HSI and reduces computing resources; however, it yields rough classification results. To exploit the strengths of both methods, we present a pixel super pixel contrastive learning and pseudo-label correction (PSCPC) method for the HSI clustering. PSCPC can reasonably capture domain-specific and fine-grained features through super pixels and the comparative learning of a small number of pixels within the super pixels. To improve the clustering performance of super pixels, this paper proposes a pseudo-label correction module that aligns the clustering pseudo-labels of pixels and super-pixels. In addition, pixel-level clustering results are used to supervise super pixel-level clustering, improving the generalization ability of the model. Extensive experiments demonstrate the effectiveness and efficiency of PSCPC.

In this article, the state estimation problems with unknown process noise and measurement noise covariances for both linear and nonlinear systems are considered. By formulating the joint estimation of system state and noise parameters into an optimization problem, a novel adaptive Kalman filter method based on conjugate-computation variational inference, referred to as CVIAKF, is proposed to approximate the joint posterior probability density function of the latent variables. Unlike the existing adaptive Kalman filter methods utilizing variational inference in natural-parameter space, CVIAKF performs optimization in expectation-parameter space, resulting in a faster and simpler solution. Meanwhile, CVIAKF divides optimization objectives into conjugate and non-conjugate parts of nonlinear dynamical models, whereas conjugate computations and stochastic mirror-descent are applied, respectively. Remarkably, the reparameterization trick is used to reduce the variance of stochastic gradients of the non-conjugate parts. The effectiveness of CVIAKF is validated through synthetic and real-world datasets of maneuvering target tracking.

Ordinal learning (OL) is a type of machine learning models with broad utility in health care applications such as diagnosis of different grades of a disease (e.g., mild, modest, severe) and prediction of the speed of disease progression (e.g., very fast, fast, moderate, slow). This paper aims to tackle a situation when precisely labeled samples are limited in the training set due to cost or availability constraints, whereas there could be an abundance of samples with imprecise labels. We focus on imprecise labels that are intervals, i.e., one can know that a sample belongs to an interval of labels but cannot know which unique label it has. This situation is quite common in health care datasets due to limitations of the diagnostic instrument, sparse clinical visits, or/and patient dropout. Limited research has been done to develop OL models with imprecise/interval labels. We propose a new Hybrid Ordinal Learner (HOL) to integrate samples with both precise and interval labels to train a robust OL model. We also develop a tractable and efficient optimization algorithm to solve the HOL formulation. We compare HOL with several recently developed OL methods on four benchmarking datasets, which demonstrate the superior performance of HOL. Finally, we apply HOL to a real-world dataset for predicting the speed of progressing to Alzheimer's Disease (AD) for individuals with Mild Cognitive Impairment (MCI) based on a combination of multi-modality neuroimaging and demographic/clinical datasets. HOL achieves high accuracy in the prediction and outperforms existing methods. The capability of accurately predicting the speed of progression to AD for each individual with MCI has the potential for helping facilitate more individually-optimized interventional strategies.

We present AEGIS-Net, a novel indoor place recognition model that takes in RGB point clouds and generates global place descriptors by aggregating lower-level color, geometry features and higher-level implicit semantic features. However, rather than simple feature concatenation, self-attention modules are employed to select the most important local features that best describe an indoor place. Our AEGIS-Net is made of a semantic encoder, a semantic decoder and an attention-guided feature embedding. The model is trained in a 2-stage process with the first stage focusing on an auxiliary semantic segmentation task and the second one on the place recognition task. We evaluate our AEGIS-Net on the ScanNetPR dataset and compare its performance with a pre-deep-learning feature-based method and five state-of-the-art deep-learning-based methods. Our AEGIS-Net achieves exceptional performance and outperforms all six methods.