Generalized linear models (GLMs)---such as logistic regression, Poisson regression, and robust regression---provide interpretable models for diverse data types. Probabilistic approaches, particularly Bayesian ones, allow coherent estimates of uncertainty, incorporation of prior information, and sharing of power across experiments via hierarchical models. In practice, however, the approximate Bayesian methods necessary for inference have either failed to scale to large data sets or failed to provide theoretical guarantees on the quality of inference. We propose a new approach based on constructing polynomial approximate sufficient statistics for GLMs (PASS-GLM). We demonstrate that our method admits a simple algorithm as well as trivial streaming and distributed extensions that do not compound error across computations. We provide theoretical guarantees on the quality of point (MAP) estimates, the approximate posterior, and posterior mean and uncertainty estimates. We validate our approach empirically in the case of logistic regression using a quadratic approximation and show competitive performance with stochastic gradient descent, MCMC, and the Laplace approximation in terms of speed and multiple measures of accuracy---including on an advertising data set with 40 million data points and 20,000 covariates.

This paper proposes Deep Hyperalignment (DHA) as a regularized, deep extension, scalable Hyperalignment (HA) method, which is well-suited for applying functional alignment to fMRI datasets with nonlinearity, high-dimensionality (broad ROI), and a large number of subjects. Unlink previous methods, DHA is not limited by a restricted fixed kernel function. Further, it uses a parametric approach, rank-m Singular Value Decomposition (SVD), and stochastic gradient descent for optimization. Therefore, DHA has a suitable time complexity for large datasets, and DHA does not require the training data when it computes the functional alignment for a new subject. Experimental studies on multi-subject fMRI analysis confirm that the DHA method achieves superior performance to other state-of-the-art HA algorithms.

Due to their simplicity and excellent performance, parallel asynchronous variants of stochastic gradient descent have become popular methods to solve a wide range of large-scale optimization problems on multi-core architectures. Yet, despite their practical success, support for nonsmooth objectives is still lacking, making them unsuitable for many problems of interest in machine learning, such as the Lasso, group Lasso or empirical risk minimization with convex constraints. In this work, we propose and analyze ProxASAGA, a fully asynchronous sparse method inspired by SAGA, a variance reduced incremental gradient algorithm. The proposed method is easy to implement and significantly outperforms the state of the art on several nonsmooth, large-scale problems. We prove that our method achieves a theoretical linear speedup with respect to the sequential version under assumptions on the sparsity of gradients and block-separability of the proximal term. Empirical benchmarks on a multi-core architecture illustrate practical speedups of up to 12x on a 20-core machine.

Co-clustering methods have been widely applied to document clustering and gene expression analysis. These methods make use of the duality between features and samples such that the co-occurring structure of sample and feature clusters can be extracted. In graph based co-clustering methods, a bipartite graph is constructed to depict the relation between features and samples. Most existing co-clustering methods conduct clustering on the graph achieved from the original data matrix, which doesn't have explicit cluster structure, thus they require a post-processing step to obtain the clustering results. In this paper, we propose a novel co-clustering method to learn a bipartite graph with exactly k connected components, where k is the number of clusters. The new bipartite graph learned in our model approximates the original graph but maintains an explicit cluster structure, from which we can immediately get the clustering results without post-processing. Extensive empirical results are presented to verify the effectiveness and robustness of our model.

Given a matrix of observed data, Principal Components Analysis (PCA) computes a small number of orthogonal directions that contain most of its variability. Provably accurate solutions for PCA have been in use for a long time. However, to the best of our knowledge, all existing theoretical guarantees for it assume that the data and the corrupting noise are mutually independent, or at least uncorrelated. This is valid in practice often, but not always. In this paper, we study the PCA problem in the setting where the data and noise can be correlated. Such noise is often also referred to as ``data-dependent noise. We obtain a correctness result for the standard eigenvalue decomposition (EVD) based solution to PCA under simple assumptions on the data-noise correlation. We also develop and analyze a generalization of EVD, cluster-EVD, that improves upon EVD in certain regimes.

We introduce a semi-parametric Bayesian model for survival analysis. The model is centred on a parametric baseline hazard, and uses a Gaussian process to model variations away from it nonparametrically, as well as dependence on covariates. As opposed to many other methods in survival analysis, our framework does not impose unnecessary constraints in the hazard rate or in the survival function. Furthermore, our model handles left, right and interval censoring mechanisms common in survival analysis. We propose a MCMC algorithm to perform inference and an approximation scheme based on random Fourier features to make computations faster. We report experimental results on synthetic and real data, showing that our model performs better than competing models such as Cox proportional hazards, ANOVA-DDP and random survival forests.

By reparameterizing the weights in this way we improve the conditioning of the optimization problem and we speed up convergence of stochastic gradient descent. Our reparameterization is inspired by batch normalization but does not introduce any dependencies between the examples in a minibatch. This means that our method can also be applied successfully to recurrent models such as LSTMs and to noise-sensitive applications such as deep reinforcement learning or generative models, for which batch normalization is less well suited. Although our method is much simpler, it still provides much of the speed-up of full batch normalization. In addition, the computational overhead of our method is lower, permitting more optimization steps to be taken in the same amount of time. We demonstrate the usefulness of our method on applications in supervised image recognition, generative modelling, and deep reinforcement learning.

A novel variational autoencoder is developed to model images, as well as associated labels or captions. The Deep Generative Deconvolutional Network (DGDN) is used as a decoder of the latent image features, and a deep Convolutional Neural Network (CNN) is used as an image encoder; the CNN is used to approximate a distribution for the latent DGDN features/code. The latent code is also linked to generative models for labels (Bayesian support vector machine) or captions (recurrent neural network). When predicting a label/caption for a new image at test, averaging is performed across the distribution of latent codes; this is computationally efficient as a consequence of the learned CNN-based encoder. Since the framework is capable of modeling the image in the presence/absence of associated labels/captions, a new semi-supervised setting is manifested for CNN learning with images; the framework even allows unsupervised CNN learning, based on images alone.

The Hard Thresholding Pursuit (HTP) is a class of truncated gradient descent methods for finding sparse solutions of $\ell_0$-constrained loss minimization problems. The HTP-style methods have been shown to have strong approximation guarantee and impressive numerical performance in high dimensional statistical learning applications. However, the current theoretical treatment of these methods has traditionally been restricted to the analysis of parameter estimation consistency. It remains an open problem to analyze the support recovery performance (a.k.a., sparsistency) of this type of methods for recovering the global minimizer of the original NP-hard problem. In this paper, we bridge this gap by showing, for the first time, that exact recovery of the global sparse minimizer is possible for HTP-style methods under restricted strong condition number bounding conditions. We further show that HTP-style methods are able to recover the support of certain relaxed sparse solutions without assuming bounded restricted strong condition number. Numerical results on simulated data confirms our theoretical predictions.

This work is motivated by the engineering task of achieving a near state-of-the-art face recognition on a minimal computing budget running on an embedded system. Our main technical contribution centers around a novel training method, called Multibatch, for similarity learning, i.e., for the task of generating an invariant ``face signature'' through training pairs of ``same'' and ``not-same'' face images. The Multibatch method first generates signatures for a mini-batch of $k$ face images and then constructs an unbiased estimate of the full gradient by relying on all $k^2-k$ pairs from the mini-batch. We prove that the variance of the Multibatch estimator is bounded by $O(1/k^2)$, under some mild conditions. In contrast, the standard gradient estimator that relies on random $k/2$ pairs has a variance of order $1/k$. The smaller variance of the Multibatch estimator significantly speeds up the convergence rate of stochastic gradient descent. Using the Multibatch method we train a deep convolutional neural network that achieves an accuracy of $98.2\%$ on the LFW benchmark, while its prediction runtime takes only $30$msec on a single ARM Cortex A9 core. Furthermore, the entire training process took only 12 hours on a single Titan X GPU.