Statistical Learning
On Valid Optimal Assignment Kernels and Applications to Graph Classification
Nils M. Kriege, Pierre-Louis Giscard, Richard Wilson
The success of kernel methods has initiated the design of novel positive semidefinite functions, in particular for structured data. A leading design paradigm for this is the convolution kernel, which decomposes structured objects into their parts and sums over all pairs of parts. Assignment kernels, in contrast, are obtained from an optimal bijection between parts, which can provide a more valid notion of similarity. In general however, optimal assignments yield indefinite functions, which complicates their use in kernel methods. We characterize a class of base kernels used to compare parts that guarantees positive semidefinite optimal assignment kernels. These base kernels give rise to hierarchies from which the optimal assignment kernels are computed in linear time by histogram intersection. We apply these results by developing the Weisfeiler-Lehman optimal assignment kernel for graphs. It provides high classification accuracy on widely-used benchmark data sets improving over the original Weisfeiler-Lehman kernel.
Measuring the reliability of MCMC inference with bidirectional Monte Carlo
Roger B. Grosse, Siddharth Ancha, Daniel M. Roy
Markov chain Monte Carlo (MCMC) is one of the main workhorses of probabilistic inference, but it is notoriously hard to measure the quality of approximate posterior samples. This challenge is particularly salient in black box inference methods, which can hide details and obscure inference failures. In this work, we extend the recently introduced bidirectional Monte Carlo [GGA15] technique to evaluate MCMC-based posterior inference algorithms. By running annealed importance sampling (AIS) chains both from prior to posterior and vice versa on simulated data, we upper bound in expectation the symmetrized KL divergence between the true posterior distribution and the distribution of approximate samples. We integrate our method into two probabilistic programming languages, WebPPL [GS] and Stan [CGHL+ p], and validate it on several models and datasets. As an example of how our method be used to guide the design of inference algorithms, we apply it to study the effectiveness of different model representations in WebPPL and Stan.
Finite-Dimensional BFRY Priors and Variational Bayesian Inference for Power Law Models
Juho Lee, Lancelot F. James, Seungjin Choi
Bayesian nonparametric methods based on the Dirichlet Process (DP), gamma process and beta process, have proven effective in capturing aspects of various datasets arising in machine learning. However, it is now recognized that such processes have their limitations in terms of the ability to capture power law behavior. As such there is now considerable interest in models based on the Stable Processs (SP), Generalized Gamma process (GGP) and Stable-Beta Process (SBP).
Exponential Family Embeddings
In this paper, we develop exponential family embeddings, a class of methods that extends the idea of word embeddings to other types of high-dimensional data. As examples, we studied neural data with real-valued observations, count data from a market basket analysis, and ratings data from a movie recommendation system. The main idea is to model each observation conditioned on a set of other observations.
Model Selection and Parameter Estimation of Multi-dimensional Gaussian Mixture Model
In this paper, we study the problem of learning multi-dimensional Gaussian Mixture Models (GMMs), with a specific focus on model order selection and efficient mixing distribution estimation. We first establish an information-theoretic lower bound on the critical sample complexity required for reliable model selection. More specifically, we show that distinguishing a $k$-component mixture from a simpler model necessitates a sample size scaling of $Ω(Δ^{-(4k-4)})$. We then propose a thresholding-based estimation algorithm that evaluates the spectral gap of an empirical covariance matrix constructed from random Fourier measurement vectors. This parameter-free estimator operates with an efficient time complexity of $\mathcal{O}(k^2 n)$, scaling linearly with the sample size. We demonstrate that the sample complexity of our method matches the established lower bound, confirming its minimax optimality with respect to the component separation distance $Δ$. Conditioned on the estimated model order, we subsequently introduce a gradient-based minimization method for parameter estimation. To effectively navigate the non-convex objective landscape, we employ a data-driven, score-based initialization strategy that guarantees rapid convergence. We prove that this method achieves the optimal parametric convergence rate of $\mathcal{O}_p(n^{-1/2})$ for estimating the component means. To enhance the algorithm's efficiency in high-dimensional regimes where the ambient dimension exceeds the number of mixture components (i.e., \(d > k\)), we integrate principal component analysis (PCA) for dimension reduction. Numerical experiments demonstrate that our Fourier-based algorithmic framework outperforms conventional Expectation-Maximization (EM) methods in both estimation accuracy and computational time.