The dynamic environment of laboratories and clinics, with streams of data arriving on a daily basis, requires regular updates of trained machine learning models for consistent performance. Continual learning is supposed to help train models without catastrophic forgetting. However, state-of-the-art methods are ineffective for multiple instance learning (MIL), which is often used in single-cell-based hematologic disease diagnosis (e.g., leukemia detection). Here, we propose the first continual learning method tailored specifically to MIL. Our method is rehearsal-based over a selection of single instances from various bags. We use a combination of the instance attention score and distance from the bag mean and class mean vectors to carefully select which samples and instances to store in exemplary sets from previous tasks, preserving the diversity of the data. Using the real-world input of one month of data from a leukemia laboratory, we study the effectiveness of our approach in a class incremental scenario, comparing it to well-known continual learning methods. We show that our method considerably outperforms state-of-the-art methods, providing the first continual learning approach for MIL. This enables the adaptation of models to shifting data distributions over time, such as those caused by changes in disease occurrence or underlying genetic alterations.

Contrastive learning (CL) has become a dominant paradigm for self-supervised hypergraph learning, enabling effective training without costly labels. However, node entities in real-world hypergraphs are often associated with rich textual information, which is overlooked in prior works. Directly applying existing CL-based methods to such text-attributed hypergraphs (TAHGs) leads to three key limitations: (1) The common use of graph-agnostic text encoders overlooks the correlations between textual content and hypergraph topology, resulting in suboptimal representations. (2) Their reliance on random data augmentations introduces noise and weakens the contrastive objective. (3) The primary focus on node- and hyperedge-level contrastive signals limits the ability to capture long-range dependencies, which is essential for expressive representation learning. Although HyperBERT pioneers CL on TAHGs, its co-training paradigm suffers from poor scalability. To fill the research gap, we introduce HiTeC, a two-stage hierarchical contrastive learning framework with semantic-aware augmentation for scalable and effective self-supervised learning on TAHGs. In the first stage, we pre-train the text encoder with a structure-aware contrastive objective to overcome the graph-agnostic nature of conventional methods. In the second stage, we introduce two semantic-aware augmentation strategies, including prompt-enhanced text augmentation and semantic-aware hyperedge drop, to facilitate informative view generation. Furthermore, we propose a multi-scale contrastive loss that extends existing objectives with an $s$-walk-based subgraph-level contrast to better capture long-range dependencies. By decoupling text encoder pretraining from hypergraph contrastive learning, this two-stage design enhances scalability without compromising representation quality. Extensive experiments confirm the effectiveness of HiTeC.

Objectives: With accurate estimates of expected safety results, clinical trials could be better designed and monitored. We evaluated methods for predicting serious adverse event (SAE) results in clinical trials using information only from their registrations prior to the trial. Material and Methods: We analyzed 22,107 two-arm parallel interventional clinical trials from ClinicalTrials.gov with structured summary results. Two prediction models were developed: a classifier predicting whether a greater proportion of participants in an experimental arm would have SAEs (area under the receiver operating characteristic curve; AUC) compared to the control arm, and a regression model to predict the proportion of participants with SAEs in the control arms (root mean squared error; RMSE). A transfer learning approach using pretrained language models (e.g., ClinicalT5, BioBERT) was used for feature extraction, combined with a downstream model for prediction. To maintain semantic representation in long trial texts exceeding localized language model input limits, a sliding window method was developed for embedding extraction. Results: The best model (ClinicalT5+Transformer+MLP) had 77.6% AUC when predicting which trial arm had a higher proportion of SAEs. When predicting SAE proportion in the control arm, the same model achieved RMSE of 18.6%. The sliding window approach consistently outperformed direct comparisons. Across 12 classifiers, the average absolute AUC increase was 2.00%, and absolute RMSE reduction was 1.58% across 12 regressors. Discussion: Summary results data from ClinicalTrials.gov remains underutilized. Predicted results of publicly reported trials provides an opportunity to identify discrepancies between expected and reported safety results.

We propose a novel segmentation-based explainable artificial intelligence (XAI) method for neural networks working on point cloud classification. As one building block of this method, we propose a novel point-shifting mechanism to introduce perturbations in point cloud data. Recently, AI has seen an exponential growth. Hence, it is important to understand the decision-making process of AI algorithms when they are applied in critical areas. Our work focuses on explaining AI algorithms that classify point cloud data. An important aspect of the methods used for explaining AI algorithms is their ability to produce explanations that are easy for humans to understand. This allows them to analyze the AI algorithms better and make appropriate decisions based on that analysis. Therefore, in this work, we intend to generate meaningful explanations that can be easily interpreted by humans. The point cloud data we consider represents 3D objects such as cars, guitars, and laptops. We make use of point cloud segmentation models to generate explanations for the working of classification models. The segments are used to introduce perturbations into the input point cloud data and generate saliency maps. The perturbations are introduced using the novel point-shifting mechanism proposed in this work which ensures that the shifted points no longer influence the output of the classification algorithm. In contrast to previous methods, the segments used by our method are meaningful, i.e. humans can easily interpret the meaning of the segments. Thus, the benefit of our method over other methods is its ability to produce more meaningful saliency maps. We compare our method with the use of classical clustering algorithms to generate explanations. We also analyze the saliency maps generated for example inputs using our method to demonstrate the usefulness of the method in generating meaningful explanations.

Crop mapping involves identifying and classifying crop types using spatial data, primarily derived from remote sensing imagery. This study presents the first comprehensive review of large-scale, pixel-wise crop mapping workflows, encompassing both conventional supervised methods and emerging transfer learning approaches. To identify the optimal time-series generation approaches and supervised crop mapping models, we conducted systematic experiments, comparing six widely adopted satellite image-based preprocessing methods, alongside eleven supervised pixel-wise classification models. Additionally, we assessed the synergistic impact of varied training sample sizes and variable combinations. Moreover, we identified optimal transfer learning techniques for different magnitudes of domain shift. The evaluation of optimal methods was conducted across five diverse agricultural sites. Landsat 8 served as the primary satellite data source. Labels come from CDL trusted pixels and field surveys. Our findings reveal three key insights. First, fine-scale interval preprocessing paired with Transformer models consistently delivered optimal performance for both supervised and transferable workflows. RF offered rapid training and competitive performance in conventional supervised learning and direct transfer to similar domains. Second, transfer learning techniques enhanced workflow adaptability, with UDA being effective for homogeneous crop classes while fine-tuning remains robust across diverse scenarios. Finally, workflow choice depends heavily on the availability of labeled samples. With a sufficient sample size, supervised training typically delivers more accurate and generalizable results. Below a certain threshold, transfer learning that matches the level of domain shift is a viable alternative to achieve crop mapping. All code is publicly available to encourage reproducibility practice.

Identifying suitable machine learning paradigms for intrusion detection remains critical for building effective and generalizable security solutions. In this study, we present a controlled comparison of four representative models - Multi-Layer Perceptron (MLP), 1D Convolutional Neural Network (CNN), One-Class Support Vector Machine (OCSVM) and Local Outlier Factor (LOF) - on the CICIDS2017 dataset under two scenarios: detecting known attack types and generalizing to previously unseen threats. Our results show that supervised MLP and CNN achieve near-perfect accuracy on familiar attacks but suffer drastic recall drops on novel attacks. Unsupervised LOF attains moderate overall accuracy and high recall on unknown threats at the cost of elevated false alarms, while boundary-based OCSVM balances precision and recall best, demonstrating robust detection across both scenarios. These findings offer practical guidance for selecting IDS models in dynamic network environments.

Quantum magnetic sensing based on spin systems has emerged as a new paradigm for detecting ultra-weak magnetic fields with unprecedented sensitivity, revitalizing applications in navigation, geo-localization, biology, and beyond. At the heart of quantum magnetic sensing, from the protocol perspective, lies the design of optimal sensing parameters to manifest and then estimate the underlying signals of interest (SoI). Existing studies on this front mainly rely on adaptive algorithms based on black-box AI models or formula-driven principled searches. However, when the SoI spans a wide range and the quantum sensor has physical constraints, these methods may fail to converge efficiently or optimally, resulting in prolonged interrogation times and reduced sensing accuracy. In this work, we report the design of a new protocol using a two-stage optimization method. In the 1st Stage, a Bayesian neural network with a fixed set of sensing parameters is used to narrow the range of SoI. In the 2nd Stage, a federated reinforcement learning agent is designed to fine-tune the sensing parameters within a reduced search space. The proposed protocol is developed and evaluated in a challenging context of single-shot readout of an NV-center electron spin under a constrained total sensing time budget; and yet it achieves significant improvements in both accuracy and resource efficiency for wide-range D.C. magnetic field estimation compared to the state of the art.

This paper studies the long-tailed semi-supervised learning (LTSSL) with distribution mismatch, where the class distribution of the labeled training data follows a long-tailed distribution and mismatches with that of the unlabeled training data. Most existing methods introduce auxiliary classifiers (experts) to model various unlabeled data distributions and produce pseudo-labels, but the expertises of various experts are not fully utilized. We observe that different experts are good at predicting different intervals of samples, e.g., long-tailed expert is skilled in samples located in the head interval and uniform expert excels in samples located in the medium interval. Therefore, we propose a dynamic expert assignment module that can estimate the class membership (i.e., head, medium, or tail class) of samples, and dynamically assigns suitable expert to each sample based on the estimated membership to produce high-quality pseudo-label in the training phase and produce prediction in the testing phase. We also theoretically reveal that integrating different experts' strengths will lead to a smaller generalization error bound. Moreover, we find that the deeper features are more biased toward the head class but with more discriminative ability, while the shallower features are less biased but also with less discriminative ability. We, therefore, propose a multi-depth feature fusion module to utilize different depth features to mitigate the model bias. Our method demonstrates its effectiveness through comprehensive experiments on the CIFAR-10-LT, STL-10-LT, and SVHN-LT datasets across various settings.

Reinforcement Learning (RL) has proven to be a powerful tool for combinatorial optimization (CO) problems due to its ability to learn heuristics that can generalize across problem instances. However, integrating knowledge that will steer the RL framework for CO solutions towards domain appropriate outcomes remains a challenging task. In this paper, we propose RIDGECUT, the first RL framework that constrains the action space to enforce structure-aware partitioning in the Normalized Cut problem. Using transportation networks as a motivating example, we introduce a novel concept that leverages domain knowledge about urban road topology -- where natural partitions often take the form of concentric rings and radial wedges. Our method reshapes the graph into a linear or circular structure to simplify the partitioning task so that we can apply sequential transformers and enables efficient learning via Proximal Policy Optimization. The resulting partitions are not only aligned with expected spatial layouts but also achieve lower normalized cuts compared to existing methods. While we focus on traffic data, our approach is broadly applicable and offers a mechanism for embedding structural priors into RL for graph partitioning.

Traditional Federated Domain Generalization (FedDG) methods focus on learning domain-invariant features or adapting to unseen target domains, often overlooking the unique knowledge embedded within the source domain, especially in strictly isolated federated learning environments. Through experimentation, we discovered a counterintuitive phenomenon.: features learned from a complete source domain have superior generalization capabilities compared to those learned directly from the target domain. This insight leads us to propose the Federated Source Domain Awareness Framework (FedSDAF), the first systematic approach to enhance FedDG by leveraging source domain-aware features. FedSDAF employs a dual-adapter architecture that decouples "local expertise" from "global generalization consensus". A Domain-Aware Adapter, retained locally, extracts and protects the unique discriminative knowledge of each source domain, while a Domain-Invariant Adapter, shared across clients, builds a robust global consensus. To enable knowledge exchange, we introduce a Bidirectional Knowledge Distillation mechanism that facilitates efficient dialogue between the adapters. Extensive experiments on four benchmark datasets (OfficeHome, PACS, VLCS, DomainNet) show that FedSDAF significantly outperforms existing FedDG methods.The source code is available at https://github.com/pizzareapers/FedSDAF.