Seeding - the task of finding initial cluster centers - is critical in obtaining high-quality clusterings for k-Means. However, k-means++ seeding, the state of the art algorithm, does not scale well to massive datasets as it is inherently sequential and requires k full passes through the data. It was recently shown that Markov chain Monte Carlo sampling can be used to efficiently approximate the seeding step of k-means++. However, this result requires assumptions on the data generating distribution. We propose a simple yet fast seeding algorithm that produces good clusterings even on the data. Our analysis shows that the algorithm allows for a favourable trade-off between solution quality and computational cost, speeding up k-means++ seeding by up to several orders of magnitude.

One of the major issues in stochastic gradient descent (SGD) methods is how to choose an appropriate step size while running the algorithm. Since the traditional line search technique does not apply for stochastic optimization methods, the common practice in SGD is either to use a diminishing step size, or to tune a step size by hand, which can be time consuming in practice. In this paper, we propose to use the Barzilai-Borwein (BB) method to automatically compute step sizes for SGD and its variant: stochastic variance reduced gradient (SVRG) method, which leads to two algorithms: SGD-BB and SVRG-BB. We prove that SVRG-BB converges linearly for strongly convex objective functions. As a by-product, we prove the linear convergence result of SVRG with Option I proposed in [10], whose convergence result has been missing in the literature. Numerical experiments on standard data sets show that the performance of SGD-BB and SVRG-BB is comparable to and sometimes even better than SGD and SVRG with best-tuned step sizes, and is superior to some advanced SGD variants.

Stochastic gradient methods for machine learning and optimization problems are usually analyzed assuming data points are sampled replacement. In contrast, sampling replacement is far less understood, yet in practice it is very common, often easier to implement, and usually performs better. In this paper, we provide competitive convergence guarantees for without-replacement sampling under several scenarios, focusing on the natural regime of few passes over the data. Moreover, we describe a useful application of these results in the context of distributed optimization with randomly-partitioned data, yielding a nearly-optimal algorithm for regularized least squares (in terms of both communication complexity and runtime complexity) under broad parameter regimes. Our proof techniques combine ideas from stochastic optimization, adversarial online learning and transductive learning theory, and can potentially be applied to other stochastic optimization and learning problems.

Calcium imaging permits optical measurement of neural activity.

Deep kernel learning combines the non-parametric flexibility of kernel methods with the inductive biases of deep learning architectures. We propose a novel deep kernel learning model and stochastic variational inference procedure which generalizes deep kernel learning approaches to enable classification, multi-task learning, additive covariance structures, and stochastic gradient training. Specifically, we apply additive base kernels to subsets of output features from deep neural architectures, and jointly learn the parameters of the base kernels and deep network through a Gaussian process marginal likelihood objective. Within this framework, we derive an efficient form of stochastic variational inference which leverages local kernel interpolation, inducing points, and structure exploiting algebra. We show improved performance over stand alone deep networks, SVMs, and state of the art scalable Gaussian processes on several classification benchmarks, including an airline delay dataset containing 6 million training points, CIFAR, and ImageNet.

Clustering is an important unsupervised learning problem in machine learning and statistics. Among many existing algorithms, kernel \km has drawn much research attention due to its ability to find non-linear cluster boundaries and its inherent simplicity. There are two main approaches for kernel k-means: SVD of the kernel matrix and convex relaxations. Despite the attention kernel clustering has received both from theoretical and applied quarters, not much is known about robustness of the methods. In this paper we first introduce a semidefinite programming relaxation for the kernel clustering problem, then prove that under a suitable model specification, both K-SVD and SDP approaches are consistent in the limit, albeit SDP is strongly consistent, i.e. achieves exact recovery, whereas K-SVD is weakly consistent, i.e. the fraction of misclassified nodes vanish. Also the error bounds suggest that SDP is more resilient towards outliers, which we also demonstrate with experiments.

Given a full rank matrix X with more columns than rows consider the task of estimating the pseudo inverse $X^+$ based on the pseudo inverse of a sampled subset of columns (of size at least the number of rows). We show that this is possible if the subset of columns is chosen proportional to the squared volume spanned by the rows of the chosen submatrix (ie, volume sampling). The resulting estimator is unbiased and surprisingly the covariance of the estimator also has a closed form: It equals a specific factor times $X^+X^{+\top}$. Pseudo inverse plays an important part in solving the linear least squares problem, where we try to predict a label for each column of $X$. We assume labels are expensive and we are only given the labels for the small subset of columns we sample from $X$. Using our methods we show that the weight vector of the solution for the sub problem is an unbiased estimator of the optimal solution for the whole problem based on all column labels. We believe that these new formulas establish a fundamental connection between linear least squares and volume sampling. We use our methods to obtain an algorithm for volume sampling that is faster than state-of-the-art and for obtaining bounds for the total loss of the estimated least-squares solution on all labeled columns.

We show that there are no spurious local minima in the non-convex factorized parametrization of low-rank matrix recovery from incoherent linear measurements. With noisy measurements we show all local minima are very close to a global optimum. Together with a curvature bound at saddle points, this yields a polynomial time global convergence guarantee for stochastic gradient descent {\em from random initialization}.

Stochastic gradient MCMC (SG-MCMC) has played an important role in large-scale Bayesian learning, with well-developed theoretical convergence properties. In such applications of SG-MCMC, it is becoming increasingly popular to employ distributed systems, where stochastic gradients are computed based on some outdated parameters, yielding what are termed stale gradients. While stale gradients could be directly used in SG-MCMC, their impact on convergence properties has not been well studied. In this paper we develop theory to show that while the bias and MSE of an SG-MCMC algorithm depend on the staleness of stochastic gradients, its estimation variance (relative to the expected estimate, based on a prescribed number of samples) is independent of it. In a simple Bayesian distributed system with SG-MCMC, where stale gradients are computed asynchronously by a set of workers, our theory indicates a linear speedup on the decrease of estimation variance w.r.t. the number of workers.

The marginal likelihood, or model evidence, is a key quantity in Bayesian parameter estimation and model comparison. For many probabilistic models, computation of the marginal likelihood is challenging, because it involves a sum or integral over an enormous parameter space. Markov chain Monte Carlo (MCMC) is a powerful approach to compute marginal likelihoods. Various MCMC algorithms and evidence estimators have been proposed in the literature. Here we discuss the use of nonequilibrium techniques for estimating the marginal likelihood. Nonequilibrium estimators build on recent developments in statistical physics and are known as annealed importance sampling (AIS) and reverse AIS in probabilistic machine learning. We introduce estimators for the model evidence that combine forward and backward simulations and show for various challenging models that the evidence estimators outperform forward and reverse AIS.