In the process of training Support Vector Machines (SVMs) by decomposition methods, working set selection is an important technique, and some exciting schemes were employed into this field. To improve working set selection, we propose a new model for working set selection in sequential minimal optimization (SMO) decomposition methods. In this model, it selects B as working set without reselection. Some properties are given by simple proof, and experiments demonstrate that the proposed method is in general faster than existing methods.

Words and phrases acquire meaning from the way they are used in society, from their relative semantics to other words and phrases. For computers the equivalent of `society' is `database,' and the equivalent of `use' is `way to search the database.' We present a new theory of similarity between words and phrases based on information distance and Kolmogorov complexity. To fix thoughts we use the world-wide-web as database, and Google as search engine. The method is also applicable to other search engines and databases. This theory is then applied to construct a method to automatically extract similarity, the Google similarity distance, of words and phrases from the world-wide-web using Google page counts. The world-wide-web is the largest database on earth, and the context information entered by millions of independent users averages out to provide automatic semantics of useful quality. We give applications in hierarchical clustering, classification, and language translation. We give examples to distinguish between colors and numbers, cluster names of paintings by 17th century Dutch masters and names of books by English novelists, the ability to understand emergencies, and primes, and we demonstrate the ability to do a simple automatic English-Spanish translation. Finally, we use the WordNet database as an objective baseline against which to judge the performance of our method. We conduct a massive randomized trial in binary classification using support vector machines to learn categories based on our Google distance, resulting in an a mean agreement of 87% with the expert crafted WordNet categories.

In many applications, input data are sampled functions taking their values in infinite dimensional spaces rather than standard vectors. This fact has complex consequences on data analysis algorithms that motivate modifications of them. In fact most of the traditional data analysis tools for regression, classification and clustering have been adapted to functional inputs under the general name of functional Data Analysis (FDA). In this paper, we investigate the use of Support Vector Machines (SVMs) for functional data analysis and we focus on the problem of curves discrimination. SVMs are large margin classifier tools based on implicit non linear mappings of the considered data into high dimensional spaces thanks to kernels. We show how to define simple kernels that take into account the unctional nature of the data and lead to consistent classification. Experiments conducted on real world data emphasize the benefit of taking into account some functional aspects of the problems.

Gaussian mixture models (GMM) and support vector machines (SVM) are introduced to classify faults in a population of cylindrical shells. The proposed procedures are tested on a population of 20 cylindrical shells and their performance is compared to the procedure, which uses multi-layer perceptrons (MLP). The modal properties extracted from vibration data are used to train the GMM, SVM and MLP. It is observed that the GMM produces 98%, SVM produces 94% classification accuracy while the MLP produces 88% classification rates.

Web page ranking and collaborative filtering require the optimization of sophisticated performance measures. Current Support Vector approaches are unable to optimize them directly and focus on pairwise comparisons instead. We present a new approach which allows direct optimization of the relevant loss functions. This is achieved via structured estimation in Hilbert spaces. It is most related to Max-Margin-Markov networks optimization of multivariate performance measures. Key to our approach is that during training the ranking problem can be viewed as a linear assignment problem, which can be solved by the Hungarian Marriage algorithm. At test time, a sort operation is sufficient, as our algorithm assigns a relevance score to every (document, query) pair. Experiments show that the our algorithm is fast and that it works very well.

One of the major problems in computational biology is the inability of existing classification models to incorporate expanding and new domain knowledge. This problem of static classification models is addressed in this paper by the introduction of incremental learning for problems in bioinformatics. Many machine learning tools have been applied to this problem using static machine learning structures such as neural networks or support vector machines that are unable to accommodate new information into their existing models. We utilize the fuzzy ARTMAP as an alternate machine learning system that has the ability of incrementally learning new data as it becomes available. The fuzzy ARTMAP is found to be comparable to many of the widespread machine learning systems. The use of an evolutionary strategy in the selection and combination of individual classifiers into an ensemble system, coupled with the incremental learning ability of the fuzzy ARTMAP is proven to be suitable as a pattern classifier. The algorithm presented is tested using data from the G-Coupled Protein Receptors Database and shows good accuracy of 83%. The system presented is also generally applicable, and can be used in problems in genomics and proteomics.

Ordinal regression is an important type of learning, which has properties of both classification and regression. Here we describe a simple and effective approach to adapt a traditional neural network to learn ordinal categories. Our approach is a generalization of the perceptron method for ordinal regression. On several benchmark datasets, our method (NNRank) outperforms a neural network classification method. Compared with the ordinal regression methods using Gaussian processes and support vector machines, NNRank achieves comparable performance. Moreover, NNRank has the advantages of traditional neural networks: learning in both online and batch modes, handling very large training datasets, and making rapid predictions. These features make NNRank a useful and complementary tool for large-scale data processing tasks such as information retrieval, web page ranking, collaborative filtering, and protein ranking in Bioinformatics.

While classical kernel-based learning algorithms are based on a single kernel, in practice it is often desirable to use multiple kernels. Lankriet et al. (2004) considered conic combinations of kernel matrices for classification, leading to a convex quadratically constraint quadratic program. We show that it can be rewritten as a semi-infinite linear program that can be efficiently solved by recycling the standard SVM implementations. Moreover, we generalize the formulation and our method to a larger class of problems, including regression and one-class classification. Experimental results show that the proposed algorithm helps for automatic model selection, improving the interpretability of the learning result and works for hundred thousands of examples or hundreds of kernels to be combined.

We determine the asymptotic limit of the function computed by support vector machines (SVM) and related algorithms that minimize a regularized empirical convex loss function in the reproducing kernel Hilbert space of the Gaussian RBF kernel, in the situation where the number of examples tends to infinity, the bandwidth of the Gaussian kernel tends to 0, and the regularization parameter is held fixed.

We show how to learn a Mahanalobis distance metric for k-nearest neighbor (kNN) classification by semidefinite programming. The metric is trained with the goal that the k-nearest neighbors always belong to the same class while examples from different classes are separated by a large margin. On seven data sets of varying size and difficulty, we find that metrics trained in this way lead to significant improvements in kNN classification--for example, achieving a test error rate of 1.3% on the MNIST handwritten digits. As in support vector machines (SVMs), the learning problem reduces to a convex optimization based on the hinge loss. Unlike learning in SVMs, however, our framework requires no modification or extension for problems in multiway (as opposed to binary) classification.