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 Clustering



Analysis of Hydrological and Suspended Sediment Events from Mad River Wastershed using Multivariate Time Series Clustering

arXiv.org Machine Learning

Hydrological storm events are a primary driver for transporting water quality constituents such as turbidity, suspended sediments and nutrients. Analyzing the concentration (C) of these water quality constituents in response to increased streamflow discharge (Q), particularly when monitored at high temporal resolution during a hydrological event, helps to characterize the dynamics and flux of such constituents. A conventional approach to storm event analysis is to reduce the C-Q time series to two-dimensional (2-D) hysteresis loops and analyze these 2-D patterns. While effective and informative to some extent, this hysteresis loop approach has limitations because projecting the C-Q time series onto a 2-D plane obscures detail (e.g., temporal variation) associated with the C-Q relationships. In this paper, we address this issue using a multivariate time series clustering approach. Clustering is applied to sequences of river discharge and suspended sediment data (acquired through turbidity-based monitoring) from six watersheds located in the Lake Champlain Basin in the northeastern United States. While clusters of the hydrological storm events using the multivariate time series approach were found to be correlated to 2-D hysteresis loop classifications and watershed locations, the clusters differed from the 2-D hysteresis classifications. Additionally, using available meteorological data associated with storm events, we examine the characteristics of computational clusters of storm events in the study watersheds and identify the features driving the clustering approach.


Adaptive Initialization Method for K-means Algorithm

arXiv.org Machine Learning

The K-means algorithm is a widely used clustering algorithm that offers simplicity and efficiency. However, the traditional K-means algorithm uses the random method to determine the initial cluster centers, which make clustering results prone to local optima and then result in worse clustering performance. Many initialization methods have been proposed, but none of them can dynamically adapt to datasets with various characteristics. In our previous research, an initialization method for K-means based on hybrid distance was proposed, and this algorithm can adapt to datasets with different characteristics. However, it has the following drawbacks: (a) When calculating density, the threshold cannot be uniquely determined, resulting in unstable results. (b) Heavily depending on adjusting the parameter, the parameter must be adjusted five times to obtain better clustering results. (c) The time complexity of the algorithm is quadratic, which is difficult to apply to large datasets. In the current paper, we proposed an adaptive initialization method for the K-means algorithm (AIMK) to improve our previous work. AIMK can not only adapt to datasets with various characteristics but also obtain better clustering results within two interactions. In addition, we then leverage random sampling in AIMK, which is named as AIMK-RS, to reduce the time complexity. AIMK-RS is easily applied to large and high-dimensional datasets. We compared AIMK and AIMK-RS with 10 different algorithms on 16 normal and six extra-large datasets. The experimental results show that AIMK and AIMK-RS outperform the current initialization methods and several well-known clustering algorithms. Furthermore, AIMK-RS can significantly reduce the complexity of applying it to extra-large datasets with high dimensions. The time complexity of AIMK-RS is O(n).


Independence Promoted Graph Disentangled Networks

arXiv.org Machine Learning

We address the problem of disentangled representation learning with independent latent factors in graph convolutional networks (GCNs). The current methods usually learn node representation by describing its neighborhood as a perceptual whole in a holistic manner while ignoring the entanglement of the latent factors. However, a real-world graph is formed by the complex interaction of many latent factors (e.g., the same hobby, education or work in social network). While little effort has been made toward exploring the disentangled representation in GCNs. In this paper, we propose a novel Independence Promoted Graph Disentangled Networks (IPGDN) to learn disentangled node representation while enhancing the independence among node representations. In particular, we firstly present disentangled representation learning by neighborhood routing mechanism, and then employ the Hilbert-Schmidt Independence Criterion (HSIC) to enforce independence between the latent representations, which is effectively integrated into a graph convolutional framework as a reg-ularizer at the output layer. Experimental studies on real-world graphs validate our model and demonstrate that our algorithms outperform the state-of-the-arts by a wide margin in different network applications, including semi-supervised graph classification, graph clustering and graph visualization.


Multi-View Multiple Clusterings using Deep Matrix Factorization

arXiv.org Machine Learning

Multi-view clustering aims at integrating complementary information from multiple heterogeneous views to improve clustering results. Existing multi-view clustering solutions can only output a single clustering of the data. Due to their multiplicity, multi-view data, can have different groupings that are reasonable and interesting from different perspectives. However, how to find multiple, meaningful, and diverse clustering results from multi-view data is still a rarely studied and challenging topic in multi-view clustering and multiple clusterings. In this paper, we introduce a deep matrix factorization based solution (DMClusts) to discover multiple clusterings. DMClusts gradually factorizes multi-view data matrices into representational subspaces layer-by-layer and generates one clustering in each layer. To enforce the diversity between generated clusterings, it minimizes a new redundancy quantification term derived from the proximity between samples in these subspaces. We further introduce an iterative optimization procedure to simultaneously seek multiple clusterings with quality and diversity. Experimental results on benchmark datasets confirm that DMClusts outperforms state-of-the-art multiple clustering solutions.


Effective Decoding in Graph Auto-Encoder using Triadic Closure

arXiv.org Machine Learning

The (variational) graph auto-encoder and its variants have been popularly used for representation learning on graph-structured data. While the encoder is often a powerful graph convolutional network, the decoder reconstructs the graph structure by only considering two nodes at a time, thus ignoring possible interactions among edges. On the other hand, structured prediction, which considers the whole graph simultaneously, is computationally expensive. In this paper, we utilize the well-known triadic closure property which is exhibited in many real-world networks. We propose the triad decoder, which considers and predicts the three edges involved in a local triad together. The triad decoder can be readily used in any graph-based auto-encoder. In particular, we incorporate this to the (variational) graph auto-encoder. Experiments on link prediction, node clustering and graph generation show that the use of triads leads to more accurate prediction, clustering and better preservation of the graph characteristics.


The Convex Information Bottleneck Lagrangian

arXiv.org Machine Learning

The information bottleneck (IB) problem tackles the issue of obtaining relevant compressed representations T of some random variable X for the task of predicting Y. It is defined as a constrained optimization problem which maximizes the information the representation has about the task, I(T;Y), while ensuring that a minimum level of compression r is achieved; i.e., I(X;T) <= r. For practical reasons the problem is usually solved by maximizing the IB Lagrangian for many values of the Lagrange multiplier, therefore drawing the IB curve (i.e., the curve of maximal I(T;Y) for a given I(X;T)) and selecting the representation of desired predictability and compression. It is known when Y is a deterministic function of X, the IB curve cannot be explored, and other Lagrangians have been proposed to tackle this problem; e.g., the squared IB Lagrangian. In this paper, we (i) present a general family of Lagrangians which allow for the exploration of the IB curve in all scenarios; and (ii) prove that if these Lagrangians are used, there is a (and we know the) one-to-one mapping between the Lagrange multiplier and the desired compression rate r for known IB curve shapes, hence, freeing us from the burden of solving the optimization problem for many values of the Lagrange multiplier. That is, we can solve the original constrained problem with a single optimization.


GRASPEL: Graph Spectral Learning at Scale

arXiv.org Machine Learning

Learning meaningful graphs from data plays important roles in many data mining and machine learning tasks, such as data representation and analysis, dimension reduction, data clustering, and visualization, etc. In this work, for the first time, we present a highly-scalable spectral approach (GRASPEL) for learning large graphs from data. By limiting the precision matrix to be a graph Laplacian, our approach aims to estimate ultra-sparse (tree-like) weighted undirected graphs and shows a clear connection with the prior graphical Lasso method. By interleaving the latest high-performance nearly-linear time spectral methods for graph sparsification, coarsening and embedding, ultra-sparse yet spectrally-robust graphs can be learned by identifying and including the most spectrally-critical edges into the graph. Compared with prior state-of-the-art graph learning approaches, GRASPEL is more scalable and allows substantially improving computing efficiency and solution quality of a variety of data mining and machine learning applications, such as spectral clustering (SC), and t-Distributed Stochastic Neighbor Embedding (t-SNE). {For example, when comparing with graphs constructed using existing methods, GRASPEL achieved the best spectral clustering efficiency and accuracy.


Schema Matching using Machine Learning

arXiv.org Artificial Intelligence

--Schema Matching is a method of finding attributes that are either similar to each other linguistically or represent the same information. In this project, we take a hybrid approach at solving this problem by making use of both the provided data and the schema name to perform one to one schema matching and introduce creation of a global dictionary to achieve one to many schema matching. We experiment with two methods of one to one matching and compare both based on their F-scores, precision and recall. We also compare our method with the ones previously suggested and highlight differences between them. The schema of a database is the skeleton that represents its logical view. In other words, a schema describes the data contained in a database, with the name of each attribute in a relation and its data type contained in the relation's schema. Any time the different tables maintained by a peer management system need to be linked to each other or when one branch of a company is closed down and all its data needs to be redistributed to the database maintained by other branches or when one company takes over another company and all data of the child comapny needs to be integrated with that of the parent company, the need to match schemas of multiple relations with each other arises. Consider the Tables I and II. Here, the ideal schema mappings would be: FName LName Name, Major Maj Stream and Address House No St Name .


Weighted Laplacian and Its Theoretical Applications

arXiv.org Machine Learning

In this paper, we develop a novel weighted Laplacian method, which is partially inspired by the theory of graph Laplacian, to study recent popular graph problems, such as multilevel graph partitioning and balanced minimum cut problem, in a more convenient manner. Since the weighted Laplacian strategy inherits the virtues of spectral methods, graph algorithms designed using weighted Laplacian will necessarily possess more robust theoretical guarantees for algorithmic performances, comparing with those existing algorithms that are heuristically proposed. In order to illustrate its powerful utility both in theory and in practice, we also present two effective applications of our weighted Laplacian method to multilevel graph partitioning and balanced minimum cut problem, respectively. By means of variational methods and theory of partial differential equations (PDEs), we have established the equivalence relations among the weighted cut problem, balanced minimum cut problem and the initial clustering problem that arises in the middle stage of graph partitioning algorithms under a multilevel structure. These equivalence relations can indeed provide solid theoretical support for algorithms based on our proposed weighted Laplacian strategy. Moreover, from the perspective of the application to the balanced minimum cut problem, weighted Laplacian can make it possible for research of numerical solutions of PDEs to be a powerful tool for the algorithmic study of graph problems. Experimental results also indicate that the algorithm embedded with our strategy indeed outperforms other existing graph algorithms, especially in terms of accuracy, thus verifying the efficacy of the proposed weighted Laplacian.