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 Clustering


Supervised Convex Clustering

arXiv.org Machine Learning

Clustering has long been a popular unsupervised learning approach to identify groups of similar objects and discover patterns from unlabeled data in many applications. Yet, coming up with meaningful interpretations of the estimated clusters has often been challenging precisely due to its unsupervised nature. Meanwhile, in many real-world scenarios, there are some noisy supervising auxiliary variables, for instance, subjective diagnostic opinions, that are related to the observed heterogeneity of the unlabeled data. By leveraging information from both supervising auxiliary variables and unlabeled data, we seek to uncover more scientifically interpretable group structures that may be hidden by completely unsupervised analyses. In this work, we propose and develop a new statistical pattern discovery method named Supervised Convex Clustering (SCC) that borrows strength from both information sources and guides towards finding more interpretable patterns via a joint convex fusion penalty. We develop several extensions of SCC to integrate different types of supervising auxiliary variables, to adjust for additional covariates, and to find biclusters. We demonstrate the practical advantages of SCC through simulations and a case study on Alzheimer's Disease genomics. Specifically, we discover new candidate genes as well as new subtypes of Alzheimer's Disease that can potentially lead to better understanding of the underlying genetic mechanisms responsible for the observed heterogeneity of cognitive decline in older adults.


Computationally efficient sparse clustering

arXiv.org Machine Learning

We study statistical and computational limits of clustering when the means of the centres are sparse and their dimension is possibly much larger than the sample size. Our theoretical analysis focuses on the simple model $X_i = z_i \theta + \varepsilon_i$, $z_i \in \{-1,1\}$, $\varepsilon_i \thicksim \mathcal{N}(0, I)$, which has two clusters with centres $\theta$ and $-\theta$. We provide a finite sample analysis of a new sparse clustering algorithm based on sparse PCA and show that it achieves the minimax optimal misclustering rate in the regime $\|\theta\| \rightarrow \infty$, matching asymptotically the Bayes error. Our results require the sparsity to grow slower than the square root of the sample size. Using a recent framework for computational lower bounds---the low-degree likelihood ratio---we give evidence that this condition is necessary for any polynomial-time clustering algorithm to succeed below the BBP threshold. This complements existing evidence based on reductions and statistical query lower bounds. Compared to these existing results, we cover a wider set of parameter regimes and give a more precise understanding of the runtime required and the misclustering error achievable. We also discuss extensions of our results to more than two clusters.


Automatic Discovery of Interpretable Planning Strategies

arXiv.org Artificial Intelligence

When making decisions, people often overlook critical information or are overly swayed by irrelevant information. A common approach to mitigate these biases is to provide decision-makers, especially professionals such as medical doctors, with decision aids, such as decision trees and flowcharts. Designing effective decision aids is a difficult problem. We propose that recently developed reinforcement learning methods for discovering clever heuristics for good decision-making can be partially leveraged to assist human experts in this design process. One of the biggest remaining obstacles to leveraging the aforementioned methods for improving human decision-making is that the policies they learn are opaque to people. To solve this problem, we introduce AI-Interpret: a general method for transforming idiosyncratic policies into simple and interpretable descriptions. Our algorithm combines recent advances in imitation learning and program induction with a new clustering method for identifying a large subset of demonstrations that can be accurately described by a simple, high-performing decision rule. We evaluate our new AI-Interpret algorithm and employ it to translate information-acquisition policies discovered through metalevel reinforcement learning. The results of three large behavioral experiments showed that the provision of decision rules as flowcharts significantly improved people's planning strategies and decisions across three different classes of sequential decision problems. Furthermore, a series of ablation studies confirmed that our AI-Interpret algorithm was critical to the discovery of interpretable decision rules and that it is ready to be applied to other reinforcement learning problems. We conclude that the methods and findings presented in this article are an important step towards leveraging automatic strategy discovery to improve human decision-making.


The effect of measurement error on clustering algorithms

arXiv.org Machine Learning

Clustering consists of a popular set of techniques used to separate data into interesting groups for further analysis. Many data sources on which clustering is performed are well-known to contain random and systematic measurement errors. Such errors may adversely affect clustering. While several techniques have been developed to deal with this problem, little is known about the effectiveness of these solutions. Moreover, no work to-date has examined the effect of systematic errors on clustering solutions. In this paper, we perform a Monte Carlo study to investigate the sensitivity of two common clustering algorithms, GMMs with merging and DBSCAN, to random and systematic error. We find that measurement error is particularly problematic when it is systematic and when it affects all variables in the dataset. For the conditions considered here, we also find that the partition-based GMM with merged components is less sensitive to measurement error than the density-based DBSCAN procedure.


Estimating the Number of Components in Finite Mixture Models via the Group-Sort-Fuse Procedure

arXiv.org Machine Learning

Estimation of the number of components (or order) of a finite mixture model is a long standing and challenging problem in statistics. We propose the Group-Sort-Fuse (GSF) procedure---a new penalized likelihood approach for simultaneous estimation of the order and mixing measure in multidimensional finite mixture models. Unlike methods which fit and compare mixtures with varying orders using criteria involving model complexity, our approach directly penalizes a continuous function of the model parameters. More specifically, given a conservative upper bound on the order, the GSF groups and sorts mixture component parameters to fuse those which are redundant. For a wide range of finite mixture models, we show that the GSF is consistent in estimating the true mixture order and achieves the $n^{-1/2}$ convergence rate for parameter estimation up to polylogarithmic factors. The GSF is implemented for several univariate and multivariate mixture models in the R package GroupSortFuse. Its finite sample performance is supported by a thorough simulation study, and its application is illustrated on two real data examples.


Clustering Frankenstein

#artificialintelligence

From time to time I come back to experiment with this stunning photograph of Boris Karloff as Frankenstein's monster. I have done several of them previously: from decomposing it into Voronoi regions, to draw it as a single line portrait using an algorithm to solve the travelling salesman problem. I also used this last technique to do a pencil portrait of the image. Today I will use a machine learning algorithm to reinterpret the monster once again. The idea is simple: once loaded the photograph, the first step is to binarize it into a black and white image using thresold function of imager package.


Intent Mining from past conversations for Conversational Agent

arXiv.org Artificial Intelligence

Conversational systems are of primary interest in the AI community. Chatbots are increasingly being deployed to provide round-the-clock support and to increase customer engagement. Many of the commercial bot building frameworks follow a standard approach that requires one to build and train an intent model to recognize a user input. Intent models are trained in a supervised setting with a collection of textual utterance and intent label pairs. Gathering a substantial and wide coverage of training data for different intent is a bottleneck in the bot building process. Moreover, the cost of labeling a hundred to thousands of conversations with intent is a time consuming and laborious job. In this paper, we present an intent discovery framework that involves 4 primary steps: Extraction of textual utterances from a conversation using a pre-trained domain agnostic Dialog Act Classifier (Data Extraction), automatic clustering of similar user utterances (Clustering), manual annotation of clusters with an intent label (Labeling) and propagation of intent labels to the utterances from the previous step, which are not mapped to any cluster (Label Propagation); to generate intent training data from raw conversations. We have introduced a novel density-based clustering algorithm ITER-DBSCAN for unbalanced data clustering. Subject Matter Expert (Annotators with domain expertise) manually looks into the clustered user utterances and provides an intent label for discovery. We conducted user studies to validate the effectiveness of the trained intent model generated in terms of coverage of intents, accuracy and time saving concerning manual annotation. Although the system is developed for building an intent model for the conversational system, this framework can also be used for a short text clustering or as a labeling framework.


Simple, Scalable, and Stable Variational Deep Clustering

arXiv.org Machine Learning

Deep clustering (DC) has become the state-of-the-art for unsupervised clustering. In principle, DC represents a variety of unsupervised methods that jointly learn the underlying clusters and the latent representation directly from unstructured datasets. However, DC methods are generally poorly applied due to high operational costs, low scalability, and unstable results. In this paper, we first evaluate several popular DC variants in the context of industrial applicability using eight empirical criteria. We then choose to focus on variational deep clustering (VDC) methods, since they mostly meet those criteria except for simplicity, scalability, and stability. To address these three unmet criteria, we introduce four generic algorithmic improvements: initial $\gamma$-training, periodic $\beta$-annealing, mini-batch GMM (Gaussian mixture model) initialization, and inverse min-max transform. We also propose a novel clustering algorithm S3VDC (simple, scalable, and stable VDC) that incorporates all those improvements. Our experiments show that S3VDC outperforms the state-of-the-art on both benchmark tasks and a large unstructured industrial dataset without any ground truth label. In addition, we analytically evaluate the usability and interpretability of S3VDC.


Local semi-supervised approach to brain tissue classification in child brain MRI

arXiv.org Machine Learning

Most segmentation methods in child brain MRI are supervised and are based on global intensity distributions of major brain structures. The successful implementation of a supervised approach depends on availability of an age-appropriate probabilistic brain atlas. For the study of early normal brain development, the construction of such a brain atlas remains a significant challenge. Moreover, using global intensity statistics leads to inaccurate detection of major brain tissue classes due to substantial intensity variations of MR signal within the constituent parts of early developing brain. In order to overcome these methodological limitations we develop a local, semi-supervised framework. It is based on Kernel Fisher Discriminant Analysis (KFDA) for pattern recognition, combined with an objective structural similarity index (SSIM) for perceptual image quality assessment. The proposed method performs optimal brain partitioning into subdomains having different average intensity values followed by SSIM-guided computation of separating surfaces between the constituent brain parts. The classified image subdomains are then stitched slice by slice via simulated annealing to form a global image of the classified brain. In this paper, we consider classification into major tissue classes (white matter and grey matter) and the cerebrospinal fluid and illustrate the proposed framework on examples of brain templates for ages 8 to 11 months and ages 44 to 60 months. We show that our method improves detection of the tissue classes by its comparison to state-of-the-art classification techniques known as Partial Volume Estimation.


k-sums: another side of k-means

arXiv.org Machine Learning

In this paper, the decades-old clustering method k-means is revisited. The original distortion minimization model of k-means is addressed by a pure stochastic minimization procedure. In each step of the iteration, one sample is tentatively reallocated from one cluster to another. It is moved to another cluster as long as the reallocation allows the sample to be closer to the new centroid. This optimization procedure converges faster to a better local minimum over k-means and many of its variants. This fundamental modification over the k-means loop leads to the redefinition of a family of k-means variants. Moreover, a new target function that minimizes the summation of pairwise distances within clusters is presented. We show that it could be solved under the same stochastic optimization procedure. This minimization procedure built upon two minimization models outperforms k-means and its variants considerably with different settings and on different datasets.