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 Clustering


Contrastive Representation Disentanglement for Clustering

arXiv.org Artificial Intelligence

Clustering continues to be a significant and challenging task. Recent studies have demonstrated impressive results by applying clustering to feature representations acquired through self-supervised learning, particularly on small datasets. However, when dealing with datasets containing a large number of clusters, such as ImageNet, current methods struggle to achieve satisfactory clustering performance. In this paper, we introduce a novel method called Contrastive representation Disentanglement for Clustering (CDC) that leverages contrastive learning to directly disentangle the feature representation for clustering. In CDC, we decompose the representation into two distinct components: one component encodes categorical information under an equipartition constraint, and the other component captures instance-specific factors. To train our model, we propose a contrastive loss that effectively utilizes both components of the representation. We conduct a theoretical analysis of the proposed loss and highlight how it assigns different weights to negative samples during the process of disentangling the feature representation. Further analysis of the gradients reveals that larger weights emphasize a stronger focus on hard negative samples. As a result, the proposed loss exhibits strong expressiveness, enabling efficient disentanglement of categorical information. Through experimental evaluation on various benchmark datasets, our method demonstrates either state-of-the-art or highly competitive clustering performance. Notably, on the complete ImageNet dataset, we achieve an accuracy of 53.4%, surpassing existing methods by a substantial margin of +10.2%.


Identifying Subgroups of ICU Patients Using End-to-End Multivariate Time-Series Clustering Algorithm Based on Real-World Vital Signs Data

arXiv.org Artificial Intelligence

This study employed the MIMIC-IV database as data source to investigate the use of dynamic, high-frequency, multivariate time-series vital signs data, including temperature, heart rate, mean blood pressure, respiratory rate, and SpO2, monitored first 8 hours data in the ICU stay. Various clustering algorithms were compared, and an end-to-end multivariate time series clustering system called Time2Feat, combined with K-Means, was chosen as the most effective method to cluster patients in the ICU. In clustering analysis, data of 8,080 patients admitted between 2008 and 2016 was used for model development and 2,038 patients admitted between 2017 and 2019 for model validation. By analyzing the differences in clinical mortality prognosis among different categories, varying risks of ICU mortality and hospital mortality were found between different subgroups. Furthermore, the study visualized the trajectory of vital signs changes. The findings of this study provide valuable insights into the potential use of multivariate time-series clustering systems in patient management and monitoring in the ICU setting.


A Survey on Explainable Anomaly Detection

arXiv.org Artificial Intelligence

In the past two decades, most research on anomaly detection has focused on improving the accuracy of the detection, while largely ignoring the explainability of the corresponding methods and thus leaving the explanation of outcomes to practitioners. As anomaly detection algorithms are increasingly used in safety-critical domains, providing explanations for the high-stakes decisions made in those domains has become an ethical and regulatory requirement. Therefore, this work provides a comprehensive and structured survey on state-of-the-art explainable anomaly detection techniques. We propose a taxonomy based on the main aspects that characterize each explainable anomaly detection technique, aiming to help practitioners and researchers find the explainable anomaly detection method that best suits their needs.


Latent Space Perspicacity and Interpretation Enhancement (LS-PIE) Framework

arXiv.org Artificial Intelligence

Linear latent variable models such as principal component analysis (PCA), independent component analysis (ICA), canonical correlation analysis (CCA), and factor analysis (FA) identify latent directions (or loadings) either ordered or unordered. The data is then projected onto the latent directions to obtain their projected representations (or scores). For example, PCA solvers usually rank the principal directions by explaining the most to least variance, while ICA solvers usually return independent directions unordered and often with single sources spread across multiple directions as multiple sub-sources, which is of severe detriment to their usability and interpretability. This paper proposes a general framework to enhance latent space representations for improving the interpretability of linear latent spaces. Although the concepts in this paper are language agnostic, the framework is written in Python. This framework automates the clustering and ranking of latent vectors to enhance the latent information per latent vector, as well as, the interpretation of latent vectors. Several innovative enhancements are incorporated including latent ranking (LR), latent scaling (LS), latent clustering (LC), and latent condensing (LCON). For a specified linear latent variable model, LR ranks latent directions according to a specified metric, LS scales latent directions according to a specified metric, LC automatically clusters latent directions into a specified number of clusters, while, LCON automatically determines an appropriate number of clusters into which to condense the latent directions for a given metric. Additional functionality of the framework includes single-channel and multi-channel data sources, data preprocessing strategies such as Hankelisation to seamlessly expand the applicability of linear latent variable models (LLVMs) to a wider variety of data. The effectiveness of LR, LS, and LCON are showcased on two crafted foundational problems with two applied latent variable models, namely, PCA and ICA.


Fast dynamic time warping and clustering in C++

arXiv.org Artificial Intelligence

We present an approach for computationally efficient dynamic time warping (DTW) and clustering of time-series data. The method frames the dynamic warping of time series datasets as an optimisation problem solved using dynamic programming, and then clusters time series data by solving a second optimisation problem using mixed-integer programming (MIP). There is also an option to use k-medoids clustering for increased speed, when a certificate for global optimality is not essential. The improved efficiency of our approach is due to task-level parallelisation of the clustering alongside DTW. Our approach was tested using the UCR Time Series Archive, and was found to be, on average, 33% faster than the next fastest option when using the same clustering method. This increases to 64% faster when considering only larger datasets (with more than 1000 time series). The MIP clustering is most effective on small numbers of longer time series, because the DTW computation is faster than other approaches, but the clustering problem becomes increasingly computationally expensive as the number of time series to be clustered increases.


Novelty Detection in Sequential Data by Informed Clustering and Modeling

arXiv.org Artificial Intelligence

Novelty detection in discrete sequences is a challenging task, since deviations from the process generating the normal data are often small or intentionally hidden. Novelties can be detected by modeling normal sequences and measuring the deviations of a new sequence from the model predictions. However, in many applications data is generated by several distinct processes so that models trained on all the data tend to over-generalize and novelties remain undetected. We propose to approach this challenge through decomposition: by clustering the data we break down the problem, obtaining simpler modeling task in each cluster which can be modeled more accurately. However, this comes at a trade-off, since the amount of training data per cluster is reduced. This is a particular problem for discrete sequences where state-of-the-art models are data-hungry. The success of this approach thus depends on the quality of the clustering, i.e., whether the individual learning problems are sufficiently simpler than the joint problem. While clustering discrete sequences automatically is a challenging and domain-specific task, it is often easy for human domain experts, given the right tools. In this paper, we adapt a state-of-the-art visual analytics tool for discrete sequence clustering to obtain informed clusters from domain experts and use LSTMs to model each cluster individually. Our extensive empirical evaluation indicates that this informed clustering outperforms automatic ones and that our approach outperforms state-of-the-art novelty detection methods for discrete sequences in three real-world application scenarios. In particular, decomposition outperforms a global model despite less training data on each individual cluster.


Dream Content Discovery from Reddit with an Unsupervised Mixed-Method Approach

arXiv.org Artificial Intelligence

Dreaming is a fundamental but not fully understood part of human experience that can shed light on our thought patterns. Traditional dream analysis practices, while popular and aided by over 130 unique scales and rating systems, have limitations. Mostly based on retrospective surveys or lab studies, they struggle to be applied on a large scale or to show the importance and connections between different dream themes. To overcome these issues, we developed a new, data-driven mixed-method approach for identifying topics in free-form dream reports through natural language processing. We tested this method on 44,213 dream reports from Reddit's r/Dreams subreddit, where we found 217 topics, grouped into 22 larger themes: the most extensive collection of dream topics to date. We validated our topics by comparing it to the widely-used Hall and van de Castle scale. Going beyond traditional scales, our method can find unique patterns in different dream types (like nightmares or recurring dreams), understand topic importance and connections, and observe changes in collective dream experiences over time and around major events, like the COVID-19 pandemic and the recent Russo-Ukrainian war. We envision that the applications of our method will provide valuable insights into the intricate nature of dreaming.


Obstacle Identification and Ellipsoidal Decomposition for Fast Motion Planning in Unknown Dynamic Environments

arXiv.org Artificial Intelligence

Collision avoidance in the presence of dynamic obstacles in unknown environments is one of the most critical challenges for unmanned systems. In this paper, we present a method that identifies obstacles in terms of ellipsoids to estimate linear and angular obstacle velocities. Our proposed method is based on the idea of any object can be approximately expressed by ellipsoids. To achieve this, we propose a method based on variational Bayesian estimation of Gaussian mixture model, the Kyachiyan algorithm, and a refinement algorithm. Our proposed method does not require knowledge of the number of clusters and can operate in real-time, unlike existing optimization-based methods. In addition, we define an ellipsoid-based feature vector to match obstacles given two timely close point frames. Our method can be applied to any environment with static and dynamic obstacles, including the ones with rotating obstacles. We compare our algorithm with other clustering methods and show that when coupled with a trajectory planner, the overall system can efficiently traverse unknown environments in the presence of dynamic obstacles.


A Data-dependent Approach for High Dimensional (Robust) Wasserstein Alignment

arXiv.org Artificial Intelligence

Many real-world problems can be formulated as the alignment between two geometric patterns. Previously, a great amount of research focus on the alignment of 2D or 3D patterns in the field of computer vision. Recently, the alignment problem in high dimensions finds several novel applications in practice. However, the research is still rather limited in the algorithmic aspect. To the best of our knowledge, most existing approaches are just simple extensions of their counterparts for 2D and 3D cases, and often suffer from the issues such as high computational complexities. In this paper, we propose an effective framework to compress the high dimensional geometric patterns. Any existing alignment method can be applied to the compressed geometric patterns and the time complexity can be significantly reduced. Our idea is inspired by the observation that high dimensional data often has a low intrinsic dimension. Our framework is a ``data-dependent'' approach that has the complexity depending on the intrinsic dimension of the input data. Our experimental results reveal that running the alignment algorithm on compressed patterns can achieve similar qualities, comparing with the results on the original patterns, but the runtimes (including the times cost for compression) are substantially lower.


Survival Kernets: Scalable and Interpretable Deep Kernel Survival Analysis with an Accuracy Guarantee

arXiv.org Artificial Intelligence

Kernel survival analysis models estimate individual survival distributions with the help of a kernel function, which measures the similarity between any two data points. Such a kernel function can be learned using deep kernel survival models. In this paper, we present a new deep kernel survival model called a survival kernet, which scales to large datasets in a manner that is amenable to model interpretation and also theoretical analysis. Specifically, the training data are partitioned into clusters based on a recently developed training set compression scheme for classification and regression called kernel netting that we extend to the survival analysis setting. At test time, each data point is represented as a weighted combination of these clusters, and each such cluster can be visualized. For a special case of survival kernets, we establish a finite-sample error bound on predicted survival distributions that is, up to a log factor, optimal. Whereas scalability at test time is achieved using the aforementioned kernel netting compression strategy, scalability during training is achieved by a warm-start procedure based on tree ensembles such as XGBoost and a heuristic approach to accelerating neural architecture search. On four standard survival analysis datasets of varying sizes (up to roughly 3 million data points), we show that survival kernets are highly competitive compared to various baselines tested in terms of time-dependent concordance index. Our code is available at: https://github.com/georgehc/survival-kernets