Clustering
Topological Point Cloud Clustering
Grande, Vincent P., Schaub, Michael T.
We present Topological Point Cloud Clustering (TPCC), a new method to cluster points in an arbitrary point cloud based on their contribution to global topological features. TPCC synthesizes desirable features from spectral clustering and topological data analysis and is based on considering the spectral properties of a simplicial complex associated to the considered point cloud. As it is based on considering sparse eigenvector computations, TPCC is similarly easy to interpret and implement as spectral clustering. However, by focusing not just on a single matrix associated to a graph created from the point cloud data, but on a whole set of Hodge-Laplacians associated to an appropriately constructed simplicial complex, we can leverage a far richer set of topological features to characterize the data points within the point cloud and benefit from the relative robustness of topological techniques against noise. We test the performance of TPCC on both synthetic and real-world data and compare it with classical spectral clustering.
Determination of the critical points for systems of directed percolation class using machine learning
Saif, M. Ali, Mughalles, Bassam M.
Recently, machine learning algorithms have been used remarkably to study the equilibrium phase transitions, however there are only a few works have been done using this technique in the nonequilibrium phase transitions. In this work, we use the supervised learning with the convolutional neural network (CNN) algorithm and unsupervised learning with the density-based spatial clustering of applications with noise (DBSCAN) algorithm to study the nonequilibrium phase transition in two models. We use CNN and DBSCAN in order to determine the critical points for directed bond percolation (bond DP) model and Domany-Kinzel cellular automaton (DK) model. Both models have been proven to have a nonequilibrium phase transition belongs to the directed percolation (DP) universality class. In the case of supervised learning we train CNN using the images which are generated from Monte Carlo simulations of directed bond percolation. We use that trained CNN in studding the phase transition for the two models. In the case of unsupervised learning, we train DBSCAN using the raw data of Monte Carlo simulations. In this case, we retrain DBSCAN at each time we change the model or lattice size. Our results from both algorithms show that, even for a very small values of lattice size, machine can predict the critical points accurately for both models. Finally, we mention to that, the value of the critical point we find here for bond DP model using CNN or DBSCAN is exactly the same value that has been found using transfer learning with a domain adversarial neural network (DANN) algorithm.
Curvature-based Clustering on Graphs
Tian, Yu, Lubberts, Zachary, Weber, Melanie
Unsupervised node clustering (or community detection) is a classical graph learning task. In this paper, we study algorithms, which exploit the geometry of the graph to identify densely connected substructures, which form clusters or communities. Our method implements discrete Ricci curvatures and their associated geometric flows, under which the edge weights of the graph evolve to reveal its community structure. We consider several discrete curvature notions and analyze the utility of the resulting algorithms. In contrast to prior literature, we study not only single-membership community detection, where each node belongs to exactly one community, but also mixed-membership community detection, where communities may overlap. For the latter, we argue that it is beneficial to perform community detection on the line graph, i.e., the graph's dual. We provide both theoretical and empirical evidence for the utility of our curvature-based clustering algorithms. In addition, we give several results on the relationship between the curvature of a graph and that of its dual, which enable the efficient implementation of our proposed mixed-membership community detection approach and which may be of independent interest for curvature-based network analysis.
On the Origin of LLMs: An Evolutionary Tree and Graph for 15,821 Large Language Models
Since late 2022, Large Language Models (LLMs) have become very prominent with LLMs like ChatGPT and Bard receiving millions of users. Hundreds of new LLMs are announced each week, many of which are deposited to Hugging Face, a repository of machine learning models and datasets. To date, nearly 16,000 Text Generation models have been uploaded to the site. Given the huge influx of LLMs, it is of interest to know which LLM backbones, settings, training methods, and families are popular or trending. However, there is no comprehensive index of LLMs available. We take advantage of the relatively systematic nomenclature of Hugging Face LLMs to perform hierarchical clustering and identify communities amongst LLMs using n-grams and term frequency-inverse document frequency. Our methods successfully identify families of LLMs and accurately cluster LLMs into meaningful subgroups. We present a public web application to navigate and explore Constellation, our atlas of 15,821 LLMs. Constellation rapidly generates a variety of visualizations, namely dendrograms, graphs, word clouds, and scatter plots. Constellation is available at the following link: https://constellation.sites.stanford.edu/.
Leveraging triplet loss for unsupervised action segmentation
Bueno-Benito, E., Tura, B., Dimiccoli, M.
In this paper, we propose a novel fully unsupervised framework that learns action representations suitable for the action segmentation task from the single input video itself, without requiring any training data. Our method is a deep metric learning approach rooted in a shallow network with a triplet loss operating on similarity distributions and a novel triplet selection strategy that effectively models temporal and semantic priors to discover actions in the new representational space. Under these circumstances, we successfully recover temporal boundaries in the learned action representations with higher quality compared with existing unsupervised approaches. The proposed method is evaluated on two widely used benchmark datasets for the action segmentation task and it achieves competitive performance by applying a generic clustering algorithm on the learned representations.
Tackling Provably Hard Representative Selection via Graph Neural Networks
Kazemi, Mehran, Tsitsulin, Anton, Esfandiari, Hossein, Bateni, MohammadHossein, Ramachandran, Deepak, Perozzi, Bryan, Mirrokni, Vahab
Representative Selection (RS) is the problem of finding a small subset of exemplars from a dataset that is representative of the dataset. In this paper, we study RS for attributed graphs, and focus on finding representative nodes that optimize the accuracy of a model trained on the selected representatives. Theoretically, we establish a new hardness result for RS (in the absence of a graph structure) by proving that a particular, highly practical variant of it (RS for Learning) is hard to approximate in polynomial time within any reasonable factor, which implies a significant potential gap between the optimum solution of widely-used surrogate functions and the actual accuracy of the model. We then study the setting where a (homophilous) graph structure is available, or can be constructed, between the data points. We show that with an appropriate modeling approach, the presence of such a structure can turn a hard RS (for learning) problem into one that can be effectively solved. To this end, we develop RS-GNN, a representation learning-based RS model based on Graph Neural Networks. Empirically, we demonstrate the effectiveness of RS-GNN on problems with predefined graph structures as well as problems with graphs induced from node feature similarities, by showing that RS-GNN achieves significant improvements over established baselines on a suite of eight benchmarks.
Nested stochastic block model for simultaneously clustering networks and nodes
Josephs, Nathaniel, Amini, Arash A., Paez, Marina, Lin, Lizhen
We introduce the nested stochastic block model (NSBM) to cluster a collection of networks while simultaneously detecting communities within each network. NSBM has several appealing features including the ability to work on unlabeled networks with potentially different node sets, the flexibility to model heterogeneous communities, and the means to automatically select the number of classes for the networks and the number of communities within each network. This is accomplished via a Bayesian model, with a novel application of the nested Dirichlet process (NDP) as a prior to jointly model the between-network and within-network clusters. The dependency introduced by the network data creates nontrivial challenges for the NDP, especially in the development of efficient samplers. For posterior inference, we propose several Markov chain Monte Carlo algorithms including a standard Gibbs sampler, a collapsed Gibbs sampler, and two blocked Gibbs samplers that ultimately return two levels of clustering labels from both within and across the networks. Extensive simulation studies are carried out which demonstrate that the model provides very accurate estimates of both levels of the clustering structure. We also apply our model to two social network datasets that cannot be analyzed using any previous method in the literature due to the anonymity of the nodes and the varying number of nodes in each network.
Multi-class Graph Clustering via Approximated Effective $p$-Resistance
This paper develops an approximation to the (effective) $p$-resistance and applies it to multi-class clustering. Spectral methods based on the graph Laplacian and its generalization to the graph $p$-Laplacian have been a backbone of non-euclidean clustering techniques. The advantage of the $p$-Laplacian is that the parameter $p$ induces a controllable bias on cluster structure. The drawback of $p$-Laplacian eigenvector based methods is that the third and higher eigenvectors are difficult to compute. Thus, instead, we are motivated to use the $p$-resistance induced by the $p$-Laplacian for clustering. For $p$-resistance, small $p$ biases towards clusters with high internal connectivity while large $p$ biases towards clusters of small "extent," that is a preference for smaller shortest-path distances between vertices in the cluster. However, the $p$-resistance is expensive to compute. We overcome this by developing an approximation to the $p$-resistance. We prove upper and lower bounds on this approximation and observe that it is exact when the graph is a tree. We also provide theoretical justification for the use of $p$-resistance for clustering. Finally, we provide experiments comparing our approximated $p$-resistance clustering to other $p$-Laplacian based methods.
Company2Vec -- German Company Embeddings based on Corporate Websites
With Company2Vec, the paper proposes a novel application in representation learning. The model analyzes business activities from unstructured company website data using Word2Vec and dimensionality reduction. Company2Vec maintains semantic language structures and thus creates efficient company embeddings in fine-granular industries. These semantic embeddings can be used for various applications in banking. Direct relations between companies and words allow semantic business analytics (e.g. top-n words for a company). Furthermore, industry prediction is presented as a supervised learning application and evaluation method. The vectorized structure of the embeddings allows measuring companies similarities with the cosine distance. Company2Vec hence offers a more fine-grained comparison of companies than the standard industry labels (NACE). This property is relevant for unsupervised learning tasks, such as clustering. An alternative industry segmentation is shown with k-means clustering on the company embeddings. Finally, this paper proposes three algorithms for (1) firm-centric, (2) industry-centric and (3) portfolio-centric peer-firm identification.
Outlier-Robust Tensor Low-Rank Representation for Data Clustering
Low-rank tensor analysis has received widespread attention with many practical applications. However, the tensor data are often contaminated by outliers or sample-specific corruptions. How to recover the tensor data that are corrupted by outliers and perform data clustering remains a challenging problem. This paper develops an outlier-robust tensor low-rank representation (OR-TLRR) method for simultaneous outlier detection and tensor data clustering based on the tensor singular value decomposition (t-SVD) algebraic framework. It is motivated by the recently proposed tensor-tensor product induced by invertible linear transforms that satisfy certain conditions. For tensor observations with arbitrary outlier corruptions, OR-TLRR has provable performance guarantee for exactly recovering the row space of clean data and detecting outliers under mild conditions. Moreover, an extension of OR-TLRR is also proposed to handle the case when parts of the data are missing. Finally, extensive experimental results on both synthetic and real data demonstrate the effectiveness of the proposed algorithms.